Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:30:08 (85475): wrapper (7.7.26015): starting
00:30:08 (85475): wrapper: running run_atlas (--nthreads 3)
[2026-02-03 00:30:08] Arguments: --nthreads 3
[2026-02-03 00:30:08] Threads: 3
[2026-02-03 00:30:08] Checking for CVMFS
[2026-02-03 00:30:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 00:30:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 00:30:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 00:30:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 00:30:09] 2.9.2.0 3018 611 63464 155810 2 49 19814374 36864001 0 130560 0 236163 99.976 29888 14164 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-03 00:30:09] CVMFS is ok
[2026-02-03 00:30:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 00:30:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 00:30:09] Further information can be found at the LHC@home message board.
[2026-02-03 00:30:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 00:30:09] Checking for apptainer binary...
[2026-02-03 00:30:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 00:30:09] Running /usr/bin/apptainer --version
[2026-02-03 00:30:09] apptainer version 1.4.1-1.1
[2026-02-03 00:30:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 00:30:09] thA352a
[2026-02-03 00:30:09] apptainer works
[2026-02-03 00:30:09] Set ATHENA_PROC_NUMBER=3
[2026-02-03 00:30:09] Set ATHENA_CORE_NUMBER=3
[2026-02-03 00:30:09] Starting ATLAS job with PandaID=6992590087
[2026-02-03 00:30:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 01:45:46]  *** The last 200 lines of the pilot log: ***
[2026-02-03 01:45:46]  guid=95344025-c679-4048-8a18-c36a496a12b2
[2026-02-03 01:45:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-03 01:45:46]  is_altstaged=None
[2026-02-03 01:45:46]  is_tar=False
[2026-02-03 01:45:46]  lfn=log.48310749._003639.job.log.tgz.1
[2026-02-03 01:45:46]  mtime=0
[2026-02-03 01:45:46]  protocol_id=None
[2026-02-03 01:45:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-03 01:45:46]  replicas=None
[2026-02-03 01:45:46]  scope=mc23_13p6TeV
[2026-02-03 01:45:46]  status=None
[2026-02-03 01:45:46]  status_code=0
[2026-02-03 01:45:46]  storage_token=
[2026-02-03 01:45:46]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6992590087/log.48310749._003639.job.log.tgz.1
[2026-02-03 01:45:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/24/log.48310749._003639.job.log.tgz.1
[2026-02-03 01:45:46]  workdir=None
[2026-02-03 01:45:46] ]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,216 | INFO     | transferring file log.48310749._003639.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6992590087/log.48310749._003639.job.log.tgz.1 to /local/data/boinc/
[2026-02-03 01:45:46] 2026-02-03 00:45:15,216 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6992590087/log.48310749._003639.job.log.tgz.1 /local/data/boinc/slots/0/log.48310749._0036
[2026-02-03 01:45:46] 2026-02-03 00:45:15,227 | INFO     | adding to output.list: log.48310749._003639.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/24/log.48310749._003639.job.log.tg
[2026-02-03 01:45:46] 2026-02-03 00:45:15,227 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-03 01:45:46] 2026-02-03 00:45:15,227 | INFO     | summary of transferred files:
[2026-02-03 01:45:46] 2026-02-03 00:45:15,227 | INFO     |  -- lfn=log.48310749._003639.job.log.tgz.1, status_code=0, status=transferred
[2026-02-03 01:45:46] 2026-02-03 00:45:15,228 | INFO     | stage-out finished correctly
[2026-02-03 01:45:46] 2026-02-03 00:45:15,256 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-03 01:45:46] 2026-02-03 00:45:15,282 | INFO     | job 6992590087 has state=finished
[2026-02-03 01:45:46] 2026-02-03 00:45:15,282 | INFO     | preparing for final server update for job 6992590087 in state='finished'
[2026-02-03 01:45:46] 2026-02-03 00:45:15,282 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6992590087/jobReport.json
[2026-02-03 01:45:46] 2026-02-03 00:45:15,283 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-03 01:45:46] 2026-02-03 00:45:15,283 | INFO     | this job has now completed (state=finished)
[2026-02-03 01:45:46] 2026-02-03 00:45:15,283 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 01:45:46] 2026-02-03 00:45:15,283 | INFO     | log transfer has been attempted: DONE
[2026-02-03 01:45:46] 2026-02-03 00:45:15,283 | INFO     | job 6992590087 has finished - writing final server update
[2026-02-03 01:45:46] 2026-02-03 00:45:15,283 | INFO     | total number of processed events: 400 (read)
[2026-02-03 01:45:46] 2026-02-03 00:45:15,284 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6992590087/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 01:45:46] 2026-02-03 00:45:15,285 | INFO     | extracted standard info from prmon json
[2026-02-03 01:45:46] 2026-02-03 00:45:15,285 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 01:45:46] 2026-02-03 00:45:15,285 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 01:45:46] 2026-02-03 00:45:15,285 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 01:45:46] 2026-02-03 00:45:15,285 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 01:45:46] 2026-02-03 00:45:15,285 | INFO     | fitting pss+swap vs Time
[2026-02-03 01:45:46] 2026-02-03 00:45:15,285 | INFO     | sum of square deviations: 93240818.0
[2026-02-03 01:45:46] 2026-02-03 00:45:15,285 | INFO     | sum of deviations: -7838214885.999998
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | mean x: 1770077353.0
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | mean y: 2491223.9402985075
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | intersect: 148802629996.383
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | chi2: 0.038533465653117376
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | current memory leak: -84.06 B/s (using 67 data points, chi2=0.04)
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | could have reported an average CPU frequency of 3476 MHz (6 samples)
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | ..............................
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | . Timing measurements:
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | . get job = 0 s
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | . initial setup = 3 s
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | . payload setup = 2 s
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | . stage-in = 0 s
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | . payload execution = 4478 s
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | . stage-out = 0 s
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | . log creation = 0 s
[2026-02-03 01:45:46] 2026-02-03 00:45:15,286 | INFO     | ..............................
[2026-02-03 01:45:46] 2026-02-03 00:45:15,312 | INFO     | 
[2026-02-03 01:45:46] 2026-02-03 00:45:15,312 | INFO     | job summary report
[2026-02-03 01:45:46] 2026-02-03 00:45:15,312 | INFO     | --------------------------------------------------
[2026-02-03 01:45:46] 2026-02-03 00:45:15,312 | INFO     | PanDA job id: 6992590087
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | task id: 48310749
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | errors: (none)
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | pilot state: finished 
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | transexitcode: 0
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | exeerrorcode: 0
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | exeerrordiag: 
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | exitcode: 0
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | exitmsg: OK
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | cpuconsumptiontime: 12797 s
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | nevents: 400
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | neventsw: 0
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | pid: 93946
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | pgrp: 93946
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | corecount: 3
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | event service: False
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | sizes: {0: 2278227, 11: 2278227, 4483: 2304520, 4484: 2304519, 4485: 2313773}
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | --------------------------------------------------
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | 
[2026-02-03 01:45:46] 2026-02-03 00:45:15,313 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-03 01:45:46] 2026-02-03 00:45:15,325 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,325 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,325 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,325 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | job 6992590087 has completed (purged errors)
[2026-02-03 01:45:46] 2026-02-03 00:45:15,326 | INFO     | overall cleanup function is called
[2026-02-03 01:45:46] 2026-02-03 00:45:15,471 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-02-03 01:45:46] 2026-02-03 00:45:16,332 | INFO     | --- collectZombieJob: --- 10, [93946]
[2026-02-03 01:45:46] 2026-02-03 00:45:16,333 | INFO     | zombie collector waiting for pid 93946
[2026-02-03 01:45:46] 2026-02-03 00:45:16,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 01:45:46] 2026-02-03 00:45:16,333 | INFO     | collected zombie processes
[2026-02-03 01:45:46] 2026-02-03 00:45:16,333 | INFO     | will attempt to kill all subprocesses of pid=93946
[2026-02-03 01:45:46] 2026-02-03 00:45:16,375 | INFO     | process IDs to be killed: [93946] (in reverse order)
[2026-02-03 01:45:46] 2026-02-03 00:45:16,398 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 01:45:46] 2026-02-03 00:45:16,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 01:45:46] 2026-02-03 00:45:16,399 | INFO     | did not find any defunct processes belonging to 93946
[2026-02-03 01:45:46] 2026-02-03 00:45:16,400 | INFO     | did not find any defunct processes belonging to 93946
[2026-02-03 01:45:46] 2026-02-03 00:45:16,400 | INFO     | ready for new job
[2026-02-03 01:45:46] 2026-02-03 00:45:16,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 01:45:46] 2026-02-03 00:45:16,401 | INFO     | **************************************
[2026-02-03 01:45:46] 2026-02-03 00:45:16,401 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 01:45:46] 2026-02-03 00:45:16,401 | INFO     | **************************************
[2026-02-03 01:45:46] 2026-02-03 00:45:16,401 | INFO     | 
[2026-02-03 01:45:46] 2026-02-03 00:45:16,402 | INFO     | architecture information:
[2026-02-03 01:45:46] 2026-02-03 00:45:16,402 | INFO     | executing command: cat /etc/os-release
[2026-02-03 01:45:46] 2026-02-03 00:45:16,410 | INFO     | cat /etc/os-release:
[2026-02-03 01:45:46] NAME="CentOS Linux"
[2026-02-03 01:45:46] VERSION="7 (Core)"
[2026-02-03 01:45:46] ID="centos"
[2026-02-03 01:45:46] ID_LIKE="rhel fedora"
[2026-02-03 01:45:46] VERSION_ID="7"
[2026-02-03 01:45:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 01:45:46] ANSI_COLOR="0;31"
[2026-02-03 01:45:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 01:45:46] HOME_URL="https://www.centos.org/"
[2026-02-03 01:45:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 01:45:46] 
[2026-02-03 01:45:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 01:45:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 01:45:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 01:45:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 01:45:46] 
[2026-02-03 01:45:46] 2026-02-03 00:45:16,410 | INFO     | **************************************
[2026-02-03 01:45:46] 2026-02-03 00:45:16,913 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-03 01:45:46] 2026-02-03 00:45:16,925 | INFO     | sufficient remaining disk space (234424893440 B)
[2026-02-03 01:45:46] 2026-02-03 00:45:16,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 01:45:46] 2026-02-03 00:45:16,926 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 01:45:46] 2026-02-03 00:45:16,926 | INFO     | update_server=False
[2026-02-03 01:45:46] 2026-02-03 00:45:16,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 01:45:46] 2026-02-03 00:45:16,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:45:46] 2026-02-03 00:45:16,926 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 01:45:46] 2026-02-03 00:45:17,625 | INFO     | all payload control threads have been joined
[2026-02-03 01:45:46] 2026-02-03 00:45:17,770 | INFO     | all job control threads have been joined
[2026-02-03 01:45:46] 2026-02-03 00:45:17,904 | INFO     | all data control threads have been joined
[2026-02-03 01:45:46] 2026-02-03 00:45:17,931 | INFO     | [job] queue monitor thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:17,932 | INFO     | [job] retrieve thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:17,934 | INFO     | [payload] failed_post thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:18,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 01:45:46] 2026-02-03 00:45:18,476 | INFO     | [payload] validate_post thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:18,549 | INFO     | job.realtimelogging is not enabled
[2026-02-03 01:45:46] 2026-02-03 00:45:18,629 | INFO     | [payload] control thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:18,776 | INFO     | [job] control thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:18,910 | INFO     | [data] control thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:18,960 | INFO     | [job] validate thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:19,031 | WARNING  | process 93946 can no longer be monitored (due to stat problems) - aborting
[2026-02-03 01:45:46] 2026-02-03 00:45:19,055 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:19,060 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 01:45:46] 2026-02-03 00:45:19,095 | INFO     | number of running child processes to parent process 93946: 1
[2026-02-03 01:45:46] 2026-02-03 00:45:19,095 | INFO     | maximum number of monitored processes: 6
[2026-02-03 01:45:46] 2026-02-03 00:45:19,095 | INFO     | aborting job monitoring since job object (job id=6992590087) has expired
[2026-02-03 01:45:46] 2026-02-03 00:45:19,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:45:46] 2026-02-03 00:45:19,095 | INFO     | will abort loop
[2026-02-03 01:45:46] 2026-02-03 00:45:19,113 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:19,193 | INFO     | [data] copytool_in thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:19,400 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:19,555 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:20,101 | INFO     | [job] job monitor thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:20,269 | INFO     | [data] copytool_out thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:20,933 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 01:45:46] 2026-02-03 00:45:24,515 | INFO     | [monitor] cgroup control has ended
[2026-02-03 01:45:46] 2026-02-03 00:45:25,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139833277798208)>', '<ExcThread(monitor, started 139832525321984)>']
[2026-02-03 01:45:46] 2026-02-03 00:45:30,132 | INFO     | all workflow threads have been joined
[2026-02-03 01:45:46] 2026-02-03 00:45:30,132 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 01:45:46] 2026-02-03 00:45:30,132 | INFO     | traces error code: 0
[2026-02-03 01:45:46] 2026-02-03 00:45:30,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 01:45:46] 2026-02-03 00:45:46,674 | INFO     | PID=89520 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 01:45:46] 2026-02-03 00:45:46,675 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 01:45:46] 2026-02-03 00:45:46,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 01:45:46] 2026-02-03 00:45:46,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 01:45:46] 2026-02-03 00:45:46,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 01:45:46] 2026-02-03 00:45:46,675 | INFO     | [monitor] control thread has ended
[2026-02-03 01:45:46] 2026-02-03 00:45:46,721 [wrapper] ==== pilot stdout END ====
[2026-02-03 01:45:46] 2026-02-03 00:45:46,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 01:45:46] 2026-02-03 00:45:46,725 [wrapper] pilotpid: 89520
[2026-02-03 01:45:46] 2026-02-03 00:45:46,727 [wrapper] Pilot exit status: 0
[2026-02-03 01:45:46] 2026-02-03 00:45:46,734 [wrapper] pandaids: 6992590087
[2026-02-03 01:45:46] 2026-02-03 00:45:46,749 [wrapper] cleanup supervisor_pilot   99099 89521
[2026-02-03 01:45:46] 2026-02-03 00:45:46,752 [wrapper] Test setup, not cleaning
[2026-02-03 01:45:46] 2026-02-03 00:45:46,754 [wrapper] apfmon messages muted
[2026-02-03 01:45:46] 2026-02-03 00:45:46,756 [wrapper] ==== wrapper stdout END ====
[2026-02-03 01:45:46] 2026-02-03 00:45:46,758 [wrapper] ==== wrapper stderr END ====
[2026-02-03 01:45:46]  *** Error codes and diagnostics ***
[2026-02-03 01:45:46]     "exeErrorCode": 0,
[2026-02-03 01:45:46]     "exeErrorDiag": "",
[2026-02-03 01:45:46]     "pilotErrorCode": 0,
[2026-02-03 01:45:46]     "pilotErrorDiag": "",
[2026-02-03 01:45:46]  *** Listing of results directory ***
[2026-02-03 01:45:46] total 662024
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc    584422 Feb  1 23:04 pilot3.tar.gz
[2026-02-03 01:45:46] -rwx------ 1 boinc boinc     36322 Feb  1 23:07 runpilot2-wrapper.sh
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc      5111 Feb  1 23:10 queuedata.json
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc       100 Feb  3 00:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 01:45:46] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 00:30 run_atlas
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc       105 Feb  3 00:30 job.xml
[2026-02-03 01:45:46] -rw-r--r-- 2 boinc boinc 491253655 Feb  3 00:30 EVNT.48310747._000073.pool.root.1
[2026-02-03 01:45:46] -rw-r--r-- 2 boinc boinc    597761 Feb  3 00:30 input.tar.gz
[2026-02-03 01:45:46] -rw-r--r-- 2 boinc boinc     15845 Feb  3 00:30 start_atlas.sh
[2026-02-03 01:45:46] drwxrwx--x 2 boinc boinc      4096 Feb  3 00:30 shared
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc         0 Feb  3 00:30 boinc_setup_complete
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc      6439 Feb  3 00:30 init_data.xml
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc         0 Feb  3 00:30 boinc_lockfile
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc      2524 Feb  3 00:30 pandaJob.out
[2026-02-03 01:45:46] -rw------- 1 boinc boinc   1009316 Feb  3 00:30 agis_schedconf.cvmfs.json
[2026-02-03 01:45:46] -rw------- 1 boinc boinc   1511668 Feb  3 00:30 agis_ddmendpoints.agis.ALL.json
[2026-02-03 01:45:46] -rw------- 1 boinc boinc       427 Feb  3 00:30 workernode_map.json
[2026-02-03 01:45:46] drwx------ 5 boinc boinc      4096 Feb  3 00:30 pilot3
[2026-02-03 01:45:46] -rw------- 1 boinc boinc 180850403 Feb  3 01:44 HITS.48310749._003639.pool.root.1
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc       530 Feb  3 01:45 boinc_task_state.xml
[2026-02-03 01:45:46] -rw------- 1 boinc boinc      1019 Feb  3 01:45 memory_monitor_summary.json
[2026-02-03 01:45:46] -rw------- 1 boinc boinc    275185 Feb  3 01:45 log.48310749._003639.job.log.tgz.1
[2026-02-03 01:45:46] -rw------- 1 boinc boinc      6317 Feb  3 01:45 heartbeat.json
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc      8192 Feb  3 01:45 boinc_mmap_file
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc        27 Feb  3 01:45 wrapper_checkpoint.txt
[2026-02-03 01:45:46] -rw------- 1 boinc boinc       745 Feb  3 01:45 pilotlog.txt
[2026-02-03 01:45:46] -rw------- 1 boinc boinc        95 Feb  3 01:45 pilot_heartbeat.json
[2026-02-03 01:45:46] -rw------- 1 boinc boinc    662552 Feb  3 01:45 log.48310749._003639.job.log.1
[2026-02-03 01:45:46] -rw------- 1 boinc boinc       357 Feb  3 01:45 output.list
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc       620 Feb  3 01:45 runtime_log
[2026-02-03 01:45:46] -rw------- 1 boinc boinc    952320 Feb  3 01:45 result.tar.gz
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc      8901 Feb  3 01:45 runtime_log.err
[2026-02-03 01:45:46] -rw------- 1 boinc boinc       658 Feb  3 01:45 gGkLDmymu68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLNRKDmyzjHgn.diag
[2026-02-03 01:45:46] -rw-r--r-- 1 boinc boinc     21316 Feb  3 01:45 stderr.txt
[2026-02-03 01:45:46] HITS file was successfully produced:
[2026-02-03 01:45:46] -rw------- 1 boinc boinc 180850403 Feb  3 01:44 shared/HITS.pool.root.1
[2026-02-03 01:45:46]  *** Contents of shared directory: ***
[2026-02-03 01:45:46] total 657892
[2026-02-03 01:45:46] -rw-r--r-- 2 boinc boinc 491253655 Feb  3 00:30 ATLAS.root_0
[2026-02-03 01:45:46] -rw-r--r-- 2 boinc boinc    597761 Feb  3 00:30 input.tar.gz
[2026-02-03 01:45:46] -rw-r--r-- 2 boinc boinc     15845 Feb  3 00:30 start_atlas.sh
[2026-02-03 01:45:46] -rw------- 1 boinc boinc 180850403 Feb  3 01:44 HITS.pool.root.1
[2026-02-03 01:45:46] -rw------- 1 boinc boinc    952320 Feb  3 01:45 result.tar.gz
01:45:47 (85475): run_atlas exited; CPU time 12817.676396
01:45:47 (85475): called boinc_finish(0)

</stderr_txt>
]]>

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