Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:26:18 (14187): wrapper (7.7.26015): starting
13:26:18 (14187): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 13:26:18] Arguments: --nthreads 8
[2026-02-02 13:26:18] Threads: 8
[2026-02-02 13:26:18] Checking for CVMFS
[2026-02-02 13:26:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 13:26:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 13:26:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 13:26:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 13:26:23] 2.11.2.0 23754 69972 137052 155787 2 53 23978315 25165825 96 130560 0 16568278 99.758 16935144 2960 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-02 13:26:23] CVMFS is ok
[2026-02-02 13:26:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 13:26:23] Checking for apptainer binary...
[2026-02-02 13:26:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 13:26:23] Running /usr/bin/apptainer --version
[2026-02-02 13:26:23] apptainer version 1.3.2-1.el7
[2026-02-02 13:26:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 13:26:38] cg-vwn493.simple-grid.lan
[2026-02-02 13:26:38] apptainer works
[2026-02-02 13:26:38] Set ATHENA_PROC_NUMBER=8
[2026-02-02 13:26:38] Set ATHENA_CORE_NUMBER=8
[2026-02-02 13:26:38] Starting ATLAS job with PandaID=6996293399
[2026-02-02 13:26:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 18:01:57]  *** The last 200 lines of the pilot log: ***
[2026-02-02 18:01:58] 2026-02-02 17:00:49,699 | INFO     | total number of processed events: 400 (read)
[2026-02-02 18:01:58] 2026-02-02 17:00:49,701 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6996293399/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 18:01:58] 2026-02-02 17:00:49,702 | INFO     | extracted standard info from prmon json
[2026-02-02 18:01:58] 2026-02-02 17:00:49,702 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 18:01:58] 2026-02-02 17:00:49,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 18:01:58] 2026-02-02 17:00:49,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 18:01:58] 2026-02-02 17:00:49,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 18:01:58] 2026-02-02 17:00:49,707 | INFO     | fitting pss+swap vs Time
[2026-02-02 18:01:58] 2026-02-02 17:00:49,708 | INFO     | sum of square deviations: 5325139844.5
[2026-02-02 18:01:58] 2026-02-02 17:00:49,710 | INFO     | sum of deviations: 125916301168.50002
[2026-02-02 18:01:58] 2026-02-02 17:00:49,710 | INFO     | mean x: 1770043736.5
[2026-02-02 18:01:58] 2026-02-02 17:00:49,710 | INFO     | mean y: 2435595.42248062
[2026-02-02 18:01:58] 2026-02-02 17:00:49,710 | INFO     | intersect: -41851368570.25535
[2026-02-02 18:01:58] 2026-02-02 17:00:49,711 | INFO     | chi2: 8.948548397972726
[2026-02-02 18:01:58] 2026-02-02 17:00:49,711 | INFO     | sum of square deviations: 5021496942.0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,713 | INFO     | sum of deviations: 140617669517.0001
[2026-02-02 18:01:58] 2026-02-02 17:00:49,713 | INFO     | mean x: 1770043584.0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,714 | INFO     | mean y: 2442840.9802371543
[2026-02-02 18:01:58] 2026-02-02 17:00:49,714 | INFO     | intersect: -49564331091.26971
[2026-02-02 18:01:58] 2026-02-02 17:00:49,714 | INFO     | chi2: 8.232675811138481
[2026-02-02 18:01:58] 2026-02-02 17:00:49,714 | INFO     | current chi2=8.232675811138481 (change=7.9998738901208135 %)
[2026-02-02 18:01:58] 2026-02-02 17:00:49,714 | INFO     | right removable region: 252
[2026-02-02 18:01:58] 2026-02-02 17:00:49,715 | INFO     | sum of square deviations: 5021496942.0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,717 | INFO     | sum of deviations: 35401847332.999985
[2026-02-02 18:01:58] 2026-02-02 17:00:49,717 | INFO     | mean x: 1770043889.0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,717 | INFO     | mean y: 2481030.355731225
[2026-02-02 18:01:58] 2026-02-02 17:00:49,717 | INFO     | intersect: -12476431982.0118
[2026-02-02 18:01:58] 2026-02-02 17:00:49,718 | INFO     | chi2: 3.8210156505185005
[2026-02-02 18:01:58] 2026-02-02 17:00:49,718 | INFO     | current chi2=3.8210156505185005 (change=57.30016220972618 %)
[2026-02-02 18:01:58] 2026-02-02 17:00:49,718 | INFO     | sum of square deviations: 4729621702.0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,720 | INFO     | sum of deviations: -33325582037.000008
[2026-02-02 18:01:58] 2026-02-02 17:00:49,720 | INFO     | mean x: 1770044041.5
[2026-02-02 18:01:58] 2026-02-02 17:00:49,721 | INFO     | mean y: 2516897.7741935486
[2026-02-02 18:01:58] 2026-02-02 17:00:49,721 | INFO     | intersect: 12474497032.922705
[2026-02-02 18:01:58] 2026-02-02 17:00:49,721 | INFO     | chi2: 1.068368837461696
[2026-02-02 18:01:58] 2026-02-02 17:00:49,721 | INFO     | current chi2=1.068368837461696 (change=72.03966339900435 %)
[2026-02-02 18:01:58] 2026-02-02 17:00:49,722 | INFO     | sum of square deviations: 4449281562.0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,724 | INFO     | sum of deviations: -43619870301.0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,724 | INFO     | mean x: 1770044194.0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,724 | INFO     | mean y: 2522458.5514403293
[2026-02-02 18:01:58] 2026-02-02 17:00:49,724 | INFO     | intersect: 17355683208.983196
[2026-02-02 18:01:58] 2026-02-02 17:00:49,725 | INFO     | chi2: 0.9661327377984408
[2026-02-02 18:01:58] 2026-02-02 17:00:49,725 | INFO     | current chi2=0.9661327377984408 (change=9.569363695234198 %)
[2026-02-02 18:01:58] 2026-02-02 17:00:49,725 | INFO     | left removable region: 30
[2026-02-02 18:01:58] 2026-02-02 17:00:49,725 | INFO     | sum of square deviations: 3392567795.5
[2026-02-02 18:01:58] 2026-02-02 17:00:49,727 | INFO     | sum of deviations: -2781894782.4999986
[2026-02-02 18:01:58] 2026-02-02 17:00:49,727 | INFO     | mean x: 1770044468.5
[2026-02-02 18:01:58] 2026-02-02 17:00:49,727 | INFO     | mean y: 2517214.346846847
[2026-02-02 18:01:58] 2026-02-02 17:00:49,727 | INFO     | intersect: 1453948038.5869908
[2026-02-02 18:01:58] 2026-02-02 17:00:49,728 | INFO     | chi2: 0.05952108942567842
[2026-02-02 18:01:58] 2026-02-02 17:00:49,728 | INFO     | current memory leak: -0.82 B/s (using 222 data points, chi2=0.06)
[2026-02-02 18:01:58] 2026-02-02 17:00:49,728 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | ..............................
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | . Timing measurements:
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | . get job = 0 s
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | . initial setup = 124 s
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | . payload setup = 159 s
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | . stage-in = 0 s
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | . payload execution = 15862 s
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | . stage-out = 5 s
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | . log creation = 1 s
[2026-02-02 18:01:58] 2026-02-02 17:00:49,729 | INFO     | ..............................
[2026-02-02 18:01:58] 2026-02-02 17:00:49,852 | INFO     | 
[2026-02-02 18:01:58] 2026-02-02 17:00:49,852 | INFO     | job summary report
[2026-02-02 18:01:58] 2026-02-02 17:00:49,852 | INFO     | --------------------------------------------------
[2026-02-02 18:01:58] 2026-02-02 17:00:49,852 | INFO     | PanDA job id: 6996293399
[2026-02-02 18:01:58] 2026-02-02 17:00:49,852 | INFO     | task id: 48317892
[2026-02-02 18:01:58] 2026-02-02 17:00:49,852 | INFO     | errors: (none)
[2026-02-02 18:01:58] 2026-02-02 17:00:49,852 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 18:01:58] 2026-02-02 17:00:49,853 | INFO     | pilot state: finished 
[2026-02-02 18:01:58] 2026-02-02 17:00:49,853 | INFO     | transexitcode: 0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,853 | INFO     | exeerrorcode: 0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,853 | INFO     | exeerrordiag: 
[2026-02-02 18:01:58] 2026-02-02 17:00:49,853 | INFO     | exitcode: 0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,853 | INFO     | exitmsg: OK
[2026-02-02 18:01:58] 2026-02-02 17:00:49,853 | INFO     | cpuconsumptiontime: 59789 s
[2026-02-02 18:01:58] 2026-02-02 17:00:49,853 | INFO     | nevents: 400
[2026-02-02 18:01:58] 2026-02-02 17:00:49,853 | INFO     | neventsw: 0
[2026-02-02 18:01:58] 2026-02-02 17:00:49,854 | INFO     | pid: 22587
[2026-02-02 18:01:58] 2026-02-02 17:00:49,854 | INFO     | pgrp: 22587
[2026-02-02 18:01:58] 2026-02-02 17:00:49,854 | INFO     | corecount: 8
[2026-02-02 18:01:58] 2026-02-02 17:00:49,854 | INFO     | event service: False
[2026-02-02 18:01:58] 2026-02-02 17:00:49,854 | INFO     | sizes: {0: 2277787, 1: 2251909, 2: 2278248, 12: 2278276, 16026: 2309553, 16027: 2309552, 16032: 2318734, 16035: 2318818, 16037: 2319012}
[2026-02-02 18:01:58] 2026-02-02 17:00:49,854 | INFO     | --------------------------------------------------
[2026-02-02 18:01:58] 2026-02-02 17:00:49,854 | INFO     | 
[2026-02-02 18:01:58] 2026-02-02 17:00:49,854 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-02 18:01:58] 2026-02-02 17:00:50,322 | INFO     | time since job start (16050s) is within the limit (349056.0s)
[2026-02-02 18:01:58] 2026-02-02 17:00:50,417 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,417 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,417 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,419 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 18:01:58] 2026-02-02 17:00:50,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,419 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 18:01:58] 2026-02-02 17:00:50,419 | INFO     | job 6996293399 has completed (purged errors)
[2026-02-02 18:01:58] 2026-02-02 17:00:50,419 | INFO     | overall cleanup function is called
[2026-02-02 18:01:58] 2026-02-02 17:00:51,428 | INFO     | --- collectZombieJob: --- 10, [22587]
[2026-02-02 18:01:58] 2026-02-02 17:00:51,428 | INFO     | zombie collector waiting for pid 22587
[2026-02-02 18:01:58] 2026-02-02 17:00:51,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 18:01:58] 2026-02-02 17:00:51,428 | INFO     | collected zombie processes
[2026-02-02 18:01:58] 2026-02-02 17:00:51,428 | INFO     | will attempt to kill all subprocesses of pid=22587
[2026-02-02 18:01:58] 2026-02-02 17:00:51,520 | INFO     | process IDs to be killed: [22587] (in reverse order)
[2026-02-02 18:01:58] 2026-02-02 17:00:52,593 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 18:01:58] 2026-02-02 17:00:52,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 18:01:58] 2026-02-02 17:00:52,595 | INFO     | did not find any defunct processes belonging to 22587
[2026-02-02 18:01:58] 2026-02-02 17:00:52,597 | INFO     | did not find any defunct processes belonging to 22587
[2026-02-02 18:01:58] 2026-02-02 17:00:52,597 | INFO     | ready for new job
[2026-02-02 18:01:58] 2026-02-02 17:00:52,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 18:01:58] 2026-02-02 17:00:52,599 | INFO     | **************************************
[2026-02-02 18:01:58] 2026-02-02 17:00:52,599 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 18:01:58] 2026-02-02 17:00:52,599 | INFO     | **************************************
[2026-02-02 18:01:58] 2026-02-02 17:00:52,599 | INFO     | 
[2026-02-02 18:01:58] 2026-02-02 17:00:52,600 | INFO     | pilot is running in a VM
[2026-02-02 18:01:58] 2026-02-02 17:00:52,600 | INFO     | architecture information:
[2026-02-02 18:01:58] 2026-02-02 17:00:52,608 | INFO     | executing command: cat /etc/os-release
[2026-02-02 18:01:58] 2026-02-02 17:00:52,934 | INFO     | cat /etc/os-release:
[2026-02-02 18:01:58] NAME="CentOS Linux"
[2026-02-02 18:01:58] VERSION="7 (Core)"
[2026-02-02 18:01:58] ID="centos"
[2026-02-02 18:01:58] ID_LIKE="rhel fedora"
[2026-02-02 18:01:58] VERSION_ID="7"
[2026-02-02 18:01:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 18:01:58] ANSI_COLOR="0;31"
[2026-02-02 18:01:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 18:01:58] HOME_URL="https://www.centos.org/"
[2026-02-02 18:01:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 18:01:58] 
[2026-02-02 18:01:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 18:01:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 18:01:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 18:01:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 18:01:58] 
[2026-02-02 18:01:58] 2026-02-02 17:00:52,934 | INFO     | **************************************
[2026-02-02 18:01:58] 2026-02-02 17:00:53,438 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-02 18:01:58] 2026-02-02 17:00:53,599 | INFO     | sufficient remaining disk space (496683188224 B)
[2026-02-02 18:01:58] 2026-02-02 17:00:53,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 18:01:58] 2026-02-02 17:00:53,600 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 18:01:58] 2026-02-02 17:00:53,600 | INFO     | update_server=False
[2026-02-02 18:01:58] 2026-02-02 17:00:53,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 18:01:58] 2026-02-02 17:00:53,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 18:01:58] 2026-02-02 17:00:53,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 18:01:58] 2026-02-02 17:00:53,608 | INFO     | aborting loop
[2026-02-02 18:01:58] 2026-02-02 17:00:53,622 | INFO     | all payload control threads have been joined
[2026-02-02 18:01:58] 2026-02-02 17:00:54,539 | INFO     | all job control threads have been joined
[2026-02-02 18:01:58] 2026-02-02 17:00:54,573 | INFO     | all data control threads have been joined
[2026-02-02 18:01:58] 2026-02-02 17:00:54,606 | INFO     | [job] retrieve thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:54,614 | INFO     | [job] job monitor thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:54,628 | INFO     | [payload] control thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:54,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 18:01:58] 2026-02-02 17:00:54,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 18:01:58] 2026-02-02 17:00:55,016 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:55,052 | INFO     | [data] copytool_in thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:55,306 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:55,463 | INFO     | [job] validate thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:55,545 | INFO     | [job] control thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:55,579 | INFO     | [data] control thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:55,679 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:55,836 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:55,871 | INFO     | [job] queue monitor thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:55,929 | INFO     | [payload] failed_post thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:56,007 | INFO     | [payload] validate_post thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:56,667 | INFO     | [data] copytool_out thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:00:57,613 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 18:01:58] 2026-02-02 17:01:17,506 [wrapper] supervise_pilot (15 min periods counter: 19)
[2026-02-02 18:01:58] 2026-02-02 17:01:23,453 | INFO     | PID=18156 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 18:01:58] 2026-02-02 17:01:23,454 | INFO     | .. there are 2 such processes running
[2026-02-02 18:01:58] 2026-02-02 17:01:23,454 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 18:01:58] 2026-02-02 17:01:23,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 18:01:58] 2026-02-02 17:01:23,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 18:01:58] 2026-02-02 17:01:47,177 | INFO     | [monitor] cgroup control has ended
[2026-02-02 18:01:58] 2026-02-02 17:01:47,228 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976552339264)>', '<ExcThread(monitor, started 139976113112832)>']
[2026-02-02 18:01:58] 2026-02-02 17:01:47,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 18:01:58] 2026-02-02 17:01:47,598 | INFO     | [monitor] control thread has ended
[2026-02-02 18:01:58] 2026-02-02 17:01:52,254 | INFO     | all workflow threads have been joined
[2026-02-02 18:01:58] 2026-02-02 17:01:52,254 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 18:01:58] 2026-02-02 17:01:52,254 | INFO     | traces error code: 0
[2026-02-02 18:01:58] 2026-02-02 17:01:52,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 18:01:58] 2026-02-02 17:01:52,598 [wrapper] ==== pilot stdout END ====
[2026-02-02 18:01:58] 2026-02-02 17:01:52,694 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 18:01:58] 2026-02-02 17:01:52,796 [wrapper] pilotpid: 18156
[2026-02-02 18:01:58] 2026-02-02 17:01:52,912 [wrapper] Pilot exit status: 0
[2026-02-02 18:01:58] 2026-02-02 17:01:53,363 [wrapper] pandaids: 6996293399
[2026-02-02 18:01:58] 2026-02-02 17:01:54,403 [wrapper] cleanup supervisor_pilot 28894 18157
[2026-02-02 18:01:58] 2026-02-02 17:01:54,549 [wrapper] Test setup, not cleaning
[2026-02-02 18:01:58] 2026-02-02 17:01:54,660 [wrapper] apfmon messages muted
[2026-02-02 18:01:58] 2026-02-02 17:01:54,762 [wrapper] ==== wrapper stdout END ====
[2026-02-02 18:01:58] 2026-02-02 17:01:54,859 [wrapper] ==== wrapper stderr END ====
[2026-02-02 18:01:58]  *** Error codes and diagnostics ***
[2026-02-02 18:01:58]     "exeErrorCode": 0,
[2026-02-02 18:01:58]     "exeErrorDiag": "",
[2026-02-02 18:01:58]     "pilotErrorCode": 0,
[2026-02-02 18:01:58]     "pilotErrorDiag": "",
[2026-02-02 18:01:58]  *** Listing of results directory ***
[2026-02-02 18:01:58] total 678364
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc    584422 Feb  1 23:04 pilot3.tar.gz
[2026-02-02 18:01:58] -rwx------. 1 boinc boinc     36322 Feb  1 23:07 runpilot2-wrapper.sh
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc      5111 Feb  1 23:10 queuedata.json
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc       100 Feb  2 13:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 18:01:58] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 13:26 run_atlas
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc       105 Feb  2 13:26 job.xml
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc      6390 Feb  2 13:26 init_data.xml
[2026-02-02 18:01:58] -rw-r--r--. 2 boinc boinc 498658354 Feb  2 13:26 EVNT.48317889._000161.pool.root.1
[2026-02-02 18:01:58] -rw-r--r--. 2 boinc boinc     15845 Feb  2 13:26 start_atlas.sh
[2026-02-02 18:01:58] drwxrwx--x. 2 boinc boinc        68 Feb  2 13:26 shared
[2026-02-02 18:01:58] -rw-r--r--. 2 boinc boinc    597761 Feb  2 13:26 input.tar.gz
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc         0 Feb  2 13:26 boinc_lockfile
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc      2521 Feb  2 13:26 pandaJob.out
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc       415 Feb  2 13:33 workernode_map.json
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc   1008375 Feb  2 13:33 agis_schedconf.cvmfs.json
[2026-02-02 18:01:58] drwx------. 5 boinc boinc      4096 Feb  2 13:33 pilot3
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc 186606464 Feb  2 17:59 HITS.48317892._008364.pool.root.1
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc       532 Feb  2 17:59 boinc_task_state.xml
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc      1011 Feb  2 18:00 memory_monitor_summary.json
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc   1511668 Feb  2 18:00 agis_ddmendpoints.agis.ALL.json
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc        95 Feb  2 18:00 pilot_heartbeat.json
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc    476863 Feb  2 18:00 log.48317892._008364.job.log.tgz.1
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc      6317 Feb  2 18:00 heartbeat.json
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc      8192 Feb  2 18:01 boinc_mmap_file
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc        28 Feb  2 18:01 wrapper_checkpoint.txt
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc      4880 Feb  2 18:01 pilotlog.txt
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc   2251049 Feb  2 18:01 log.48317892._008364.job.log.1
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc       357 Feb  2 18:01 output.list
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc       620 Feb  2 18:01 runtime_log
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc   2744320 Feb  2 18:01 result.tar.gz
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc      8816 Feb  2 18:01 runtime_log.err
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc       655 Feb  2 18:01 2N4MDmkmu68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1LRKDmzy8a2m.diag
[2026-02-02 18:01:58] -rw-r--r--. 1 boinc boinc     20733 Feb  2 18:01 stderr.txt
[2026-02-02 18:01:58] HITS file was successfully produced:
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc 186606464 Feb  2 17:59 shared/HITS.pool.root.1
[2026-02-02 18:01:58]  *** Contents of shared directory: ***
[2026-02-02 18:01:58] total 672488
[2026-02-02 18:01:58] -rw-r--r--. 2 boinc boinc 498658354 Feb  2 13:26 ATLAS.root_0
[2026-02-02 18:01:58] -rw-r--r--. 2 boinc boinc     15845 Feb  2 13:26 start_atlas.sh
[2026-02-02 18:01:58] -rw-r--r--. 2 boinc boinc    597761 Feb  2 13:26 input.tar.gz
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc 186606464 Feb  2 17:59 HITS.pool.root.1
[2026-02-02 18:01:58] -rw-------. 1 boinc boinc   2744320 Feb  2 18:01 result.tar.gz
18:02:00 (14187): run_atlas exited; CPU time 59955.029609
18:02:00 (14187): called boinc_finish(0)

</stderr_txt>
]]>

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