Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:03:02 (3144920): wrapper (7.7.26015): starting
05:03:02 (3144920): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 05:03:02] Arguments: --nthreads 12
[2026-02-02 05:03:02] Threads: 12
[2026-02-02 05:03:02] Checking for CVMFS
[2026-02-02 05:03:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 05:03:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 05:03:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 05:03:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 05:03:05] 2.11.0.0 921820 4792 93356 155774 1 188 4240852 6144001 11999 130560 0 47524710 99.999 176921 167 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-02 05:03:05] CVMFS is ok
[2026-02-02 05:03:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 05:03:05] Checking for apptainer binary...
[2026-02-02 05:03:05] apptainer is not installed, using version from CVMFS
[2026-02-02 05:03:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 05:03:06] radiat0r
[2026-02-02 05:03:06] apptainer works
[2026-02-02 05:03:06] Set ATHENA_PROC_NUMBER=12
[2026-02-02 05:03:06] Set ATHENA_CORE_NUMBER=12
[2026-02-02 05:03:06] Starting ATLAS job with PandaID=6992588013
[2026-02-02 05:03:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 05:50:40]  *** The last 200 lines of the pilot log: ***
[2026-02-02 05:50:40]  lfn=log.48310749._003569.job.log.tgz.1
[2026-02-02 05:50:40]  mtime=0
[2026-02-02 05:50:40]  protocol_id=None
[2026-02-02 05:50:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 05:50:40]  replicas=None
[2026-02-02 05:50:40]  scope=mc23_13p6TeV
[2026-02-02 05:50:40]  status=None
[2026-02-02 05:50:40]  status_code=0
[2026-02-02 05:50:40]  storage_token=
[2026-02-02 05:50:40]  surl=/var/lib/boinc/slots/9/PanDA_Pilot-6992588013/log.48310749._003569.job.log.tgz.1
[2026-02-02 05:50:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/6d/log.48310749._003569.job.log.tgz.1
[2026-02-02 05:50:40]  workdir=None
[2026-02-02 05:50:40] ]
[2026-02-02 05:50:40] 2026-02-02 05:49:43,294 | INFO     | transferring file log.48310749._003569.job.log.tgz.1 from /var/lib/boinc/slots/9/PanDA_Pilot-6992588013/log.48310749._003569.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-02 05:50:40] 2026-02-02 05:49:43,294 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/9/PanDA_Pilot-6992588013/log.48310749._003569.job.log.tgz.1 /var/lib/boinc/slots/9/log.48310749._003569.job
[2026-02-02 05:50:40] 2026-02-02 05:49:43,330 | INFO     | adding to output.list: log.48310749._003569.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/6d/log.48310749._003569.job.log.tg
[2026-02-02 05:50:40] 2026-02-02 05:49:43,331 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 05:50:40] 2026-02-02 05:49:43,332 | INFO     | summary of transferred files:
[2026-02-02 05:50:40] 2026-02-02 05:49:43,332 | INFO     |  -- lfn=log.48310749._003569.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 05:50:40] 2026-02-02 05:49:43,332 | INFO     | stage-out finished correctly
[2026-02-02 05:50:40] 2026-02-02 05:49:43,427 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 05:50:40] 2026-02-02 05:49:45,165 | INFO     | job 6992588013 has state=finished
[2026-02-02 05:50:40] 2026-02-02 05:49:45,165 | INFO     | preparing for final server update for job 6992588013 in state='finished'
[2026-02-02 05:50:40] 2026-02-02 05:49:45,166 | INFO     | reading metadata from: /var/lib/boinc/slots/9/PanDA_Pilot-6992588013/jobReport.json
[2026-02-02 05:50:40] 2026-02-02 05:49:45,169 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/9/workernode_map.json
[2026-02-02 05:50:40] 2026-02-02 05:49:45,170 | INFO     | this job has now completed (state=finished)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,170 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,170 | INFO     | log transfer has been attempted: DONE
[2026-02-02 05:50:40] 2026-02-02 05:49:45,170 | INFO     | job 6992588013 has finished - writing final server update
[2026-02-02 05:50:40] 2026-02-02 05:49:45,170 | INFO     | total number of processed events: 400 (read)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,171 | INFO     | time since job start (2774s) is within the limit (349056.0s)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,208 | WARNING  | process 3165836 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 05:50:40] 2026-02-02 05:49:45,209 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6992588013/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,261 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6992588013/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,261 | INFO     | extracted standard info from prmon json
[2026-02-02 05:50:40] 2026-02-02 05:49:45,262 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 05:50:40] 2026-02-02 05:49:45,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 05:50:40] 2026-02-02 05:49:45,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 05:50:40] 2026-02-02 05:49:45,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 05:50:40] 2026-02-02 05:49:45,264 | INFO     | fitting pss+swap vs Time
[2026-02-02 05:50:40] 2026-02-02 05:49:45,264 | INFO     | sum of square deviations: 17003109.5
[2026-02-02 05:50:40] 2026-02-02 05:49:45,265 | INFO     | sum of deviations: 309942067.5
[2026-02-02 05:50:40] 2026-02-02 05:49:45,265 | INFO     | mean x: 1770010070.5
[2026-02-02 05:50:40] 2026-02-02 05:49:45,265 | INFO     | mean y: 2648364.6578947366
[2026-02-02 05:50:40] 2026-02-02 05:49:45,265 | INFO     | intersect: -32262072435.181145
[2026-02-02 05:50:40] 2026-02-02 05:49:45,265 | INFO     | chi2: 0.0006887614085618192
[2026-02-02 05:50:40] 2026-02-02 05:49:45,265 | INFO     | current memory leak: 18.23 B/s (using 38 data points, chi2=0.00)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,266 | INFO     | could have reported an average CPU frequency of 2386 MHz (5 samples)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,266 | INFO     | ..............................
[2026-02-02 05:50:40] 2026-02-02 05:49:45,266 | INFO     | . Timing measurements:
[2026-02-02 05:50:40] 2026-02-02 05:49:45,266 | INFO     | . get job = 0 s
[2026-02-02 05:50:40] 2026-02-02 05:49:45,266 | INFO     | . initial setup = 10 s
[2026-02-02 05:50:40] 2026-02-02 05:49:45,266 | INFO     | . payload setup = 8 s
[2026-02-02 05:50:40] 2026-02-02 05:49:45,267 | INFO     | . stage-in = 0 s
[2026-02-02 05:50:40] 2026-02-02 05:49:45,267 | INFO     | . payload execution = 2746 s
[2026-02-02 05:50:40] 2026-02-02 05:49:45,267 | INFO     | . stage-out = 0 s
[2026-02-02 05:50:40] 2026-02-02 05:49:45,267 | INFO     | . log creation = 0 s
[2026-02-02 05:50:40] 2026-02-02 05:49:45,267 | INFO     | ..............................
[2026-02-02 05:50:40] 2026-02-02 05:49:45,364 | INFO     | 
[2026-02-02 05:50:40] 2026-02-02 05:49:45,365 | INFO     | job summary report
[2026-02-02 05:50:40] 2026-02-02 05:49:45,365 | INFO     | --------------------------------------------------
[2026-02-02 05:50:40] 2026-02-02 05:49:45,365 | INFO     | PanDA job id: 6992588013
[2026-02-02 05:50:40] 2026-02-02 05:49:45,365 | INFO     | task id: 48310749
[2026-02-02 05:50:40] 2026-02-02 05:49:45,365 | INFO     | errors: (none)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,366 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 05:50:40] 2026-02-02 05:49:45,366 | INFO     | pilot state: finished 
[2026-02-02 05:50:40] 2026-02-02 05:49:45,366 | INFO     | transexitcode: 0
[2026-02-02 05:50:40] 2026-02-02 05:49:45,366 | INFO     | exeerrorcode: 0
[2026-02-02 05:50:40] 2026-02-02 05:49:45,366 | INFO     | exeerrordiag: 
[2026-02-02 05:50:40] 2026-02-02 05:49:45,366 | INFO     | exitcode: 0
[2026-02-02 05:50:40] 2026-02-02 05:49:45,367 | INFO     | exitmsg: OK
[2026-02-02 05:50:40] 2026-02-02 05:49:45,367 | INFO     | cpuconsumptiontime: 28928 s
[2026-02-02 05:50:40] 2026-02-02 05:49:45,367 | INFO     | nevents: 400
[2026-02-02 05:50:40] 2026-02-02 05:49:45,367 | INFO     | neventsw: 0
[2026-02-02 05:50:40] 2026-02-02 05:49:45,367 | INFO     | pid: 3165836
[2026-02-02 05:50:40] 2026-02-02 05:49:45,367 | INFO     | pgrp: 3165836
[2026-02-02 05:50:40] 2026-02-02 05:49:45,367 | INFO     | corecount: 12
[2026-02-02 05:50:40] 2026-02-02 05:49:45,368 | INFO     | event service: False
[2026-02-02 05:50:40] 2026-02-02 05:49:45,368 | INFO     | sizes: {0: 2277960, 1: 2278222, 11: 2278250, 2758: 2303725, 2759: 2303724, 2761: 2312962, 2763: 2313132}
[2026-02-02 05:50:40] 2026-02-02 05:49:45,368 | INFO     | --------------------------------------------------
[2026-02-02 05:50:40] 2026-02-02 05:49:45,368 | INFO     | 
[2026-02-02 05:50:40] 2026-02-02 05:49:45,368 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-02-02 05:50:40] 2026-02-02 05:49:45,402 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,402 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,402 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,402 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,405 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,405 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 05:50:40] 2026-02-02 05:49:45,405 | INFO     | job 6992588013 has completed (purged errors)
[2026-02-02 05:50:40] 2026-02-02 05:49:45,405 | INFO     | overall cleanup function is called
[2026-02-02 05:50:40] 2026-02-02 05:49:46,203 | INFO     | number of running child processes to parent process 3165836: 1
[2026-02-02 05:50:40] 2026-02-02 05:49:46,203 | INFO     | maximum number of monitored processes: 6
[2026-02-02 05:50:40] 2026-02-02 05:49:46,203 | INFO     | aborting job monitoring since job object (job id=6992588013) has expired
[2026-02-02 05:50:40] 2026-02-02 05:49:46,416 | INFO     | --- collectZombieJob: --- 10, [3165836]
[2026-02-02 05:50:40] 2026-02-02 05:49:46,417 | INFO     | zombie collector waiting for pid 3165836
[2026-02-02 05:50:40] 2026-02-02 05:49:46,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 05:50:40] 2026-02-02 05:49:46,417 | INFO     | collected zombie processes
[2026-02-02 05:50:40] 2026-02-02 05:49:46,417 | INFO     | will attempt to kill all subprocesses of pid=3165836
[2026-02-02 05:50:40] 2026-02-02 05:49:47,911 | INFO     | PID=3154656 has CPU usage=29.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-02 05:50:40] 2026-02-02 05:49:47,912 | INFO     | .. there are 14 such processes running
[2026-02-02 05:50:40] 2026-02-02 05:49:48,003 | INFO     | process IDs to be killed: [3165836] (in reverse order)
[2026-02-02 05:50:40] 2026-02-02 05:49:48,278 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 05:50:40] 2026-02-02 05:49:48,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 05:50:40] 2026-02-02 05:49:48,307 | INFO     | did not find any defunct processes belonging to 3165836
[2026-02-02 05:50:40] 2026-02-02 05:49:48,334 | INFO     | did not find any defunct processes belonging to 3165836
[2026-02-02 05:50:40] 2026-02-02 05:49:48,334 | INFO     | ready for new job
[2026-02-02 05:50:40] 2026-02-02 05:49:48,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 05:50:40] 2026-02-02 05:49:48,336 | INFO     | **************************************
[2026-02-02 05:50:40] 2026-02-02 05:49:48,336 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 05:50:40] 2026-02-02 05:49:48,336 | INFO     | **************************************
[2026-02-02 05:50:40] 2026-02-02 05:49:48,336 | INFO     | 
[2026-02-02 05:50:40] 2026-02-02 05:49:48,374 | INFO     | architecture information:
[2026-02-02 05:50:40] 2026-02-02 05:49:48,375 | INFO     | executing command: cat /etc/os-release
[2026-02-02 05:50:40] 2026-02-02 05:49:48,397 | INFO     | cat /etc/os-release:
[2026-02-02 05:50:40] NAME="CentOS Linux"
[2026-02-02 05:50:40] VERSION="7 (Core)"
[2026-02-02 05:50:40] ID="centos"
[2026-02-02 05:50:40] ID_LIKE="rhel fedora"
[2026-02-02 05:50:40] VERSION_ID="7"
[2026-02-02 05:50:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 05:50:40] ANSI_COLOR="0;31"
[2026-02-02 05:50:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 05:50:40] HOME_URL="https://www.centos.org/"
[2026-02-02 05:50:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 05:50:40] 
[2026-02-02 05:50:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 05:50:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 05:50:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 05:50:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 05:50:40] 
[2026-02-02 05:50:40] 2026-02-02 05:49:48,398 | INFO     | **************************************
[2026-02-02 05:50:40] 2026-02-02 05:49:48,901 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-02-02 05:50:40] 2026-02-02 05:49:48,930 | INFO     | sufficient remaining disk space (1704263155712 B)
[2026-02-02 05:50:40] 2026-02-02 05:49:48,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 05:50:40] 2026-02-02 05:49:48,930 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 05:50:40] 2026-02-02 05:49:48,931 | INFO     | update_server=False
[2026-02-02 05:50:40] 2026-02-02 05:49:48,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 05:50:40] 2026-02-02 05:49:48,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 05:50:40] 2026-02-02 05:49:49,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 05:50:40] 2026-02-02 05:49:49,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:50:40] 2026-02-02 05:49:49,712 | INFO     | aborting loop
[2026-02-02 05:50:40] 2026-02-02 05:49:49,916 | INFO     | all data control threads have been joined
[2026-02-02 05:50:40] 2026-02-02 05:49:49,921 | INFO     | all job control threads have been joined
[2026-02-02 05:50:40] 2026-02-02 05:49:49,936 | INFO     | [job] retrieve thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:50,185 | INFO     | [payload] validate_post thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:50,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:50:40] 2026-02-02 05:49:50,418 | INFO     | all payload control threads have been joined
[2026-02-02 05:50:40] 2026-02-02 05:49:50,477 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:50,504 | INFO     | [job] validate thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:50,717 | INFO     | [job] job monitor thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:50,768 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:50,924 | INFO     | [data] control thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:50,926 | INFO     | [job] control thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:50,942 | INFO     | [data] copytool_out thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:51,024 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:51,283 | INFO     | [payload] failed_post thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:51,316 | INFO     | [data] copytool_in thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:51,382 | INFO     | [job] queue monitor thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:51,424 | INFO     | [payload] control thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:53,532 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:49:59,260 | INFO     | job.realtimelogging is not enabled
[2026-02-02 05:50:40] 2026-02-02 05:50:00,265 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 05:50:40] 2026-02-02 05:50:18,987 | INFO     | 2788s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-02 05:50:40] 2026-02-02 05:50:20,864 | INFO     | PID=3154656 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 05:50:40] 2026-02-02 05:50:20,864 | INFO     | .. there are 14 such processes running
[2026-02-02 05:50:40] 2026-02-02 05:50:20,865 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 05:50:40] 2026-02-02 05:50:20,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 05:50:40] 2026-02-02 05:50:20,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 05:50:40] 2026-02-02 05:50:34,644 | INFO     | [monitor] cgroup control has ended
[2026-02-02 05:50:40] 2026-02-02 05:50:34,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995115833152)>', '<ExcThread(monitor, started 139994819700480)>']
[2026-02-02 05:50:40] 2026-02-02 05:50:34,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 05:50:40] 2026-02-02 05:50:34,925 | INFO     | [monitor] control thread has ended
[2026-02-02 05:50:40] 2026-02-02 05:50:39,828 | INFO     | all workflow threads have been joined
[2026-02-02 05:50:40] 2026-02-02 05:50:39,828 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 05:50:40] 2026-02-02 05:50:39,829 | INFO     | traces error code: 0
[2026-02-02 05:50:40] 2026-02-02 05:50:39,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 05:50:40] 2026-02-02 05:50:40,009 [wrapper] ==== pilot stdout END ====
[2026-02-02 05:50:40] 2026-02-02 05:50:40,012 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 05:50:40] 2026-02-02 05:50:40,015 [wrapper] pilotpid: 3154656
[2026-02-02 05:50:40] 2026-02-02 05:50:40,018 [wrapper] Pilot exit status: 0
[2026-02-02 05:50:40] 2026-02-02 05:50:40,031 [wrapper] pandaids: 6992588013
[2026-02-02 05:50:40] 2026-02-02 05:50:40,212 [wrapper] cleanup supervisor_pilot 3370771 3154657
[2026-02-02 05:50:40] 2026-02-02 05:50:40,216 [wrapper] Test setup, not cleaning
[2026-02-02 05:50:40] 2026-02-02 05:50:40,220 [wrapper] apfmon messages muted
[2026-02-02 05:50:40] 2026-02-02 05:50:40,223 [wrapper] ==== wrapper stdout END ====
[2026-02-02 05:50:40] 2026-02-02 05:50:40,226 [wrapper] ==== wrapper stderr END ====
[2026-02-02 05:50:40]  *** Error codes and diagnostics ***
[2026-02-02 05:50:40]     "exeErrorCode": 0,
[2026-02-02 05:50:40]     "exeErrorDiag": "",
[2026-02-02 05:50:40]     "pilotErrorCode": 0,
[2026-02-02 05:50:40]     "pilotErrorDiag": "",
[2026-02-02 05:50:40]  *** Listing of results directory ***
[2026-02-02 05:50:40] total 660792
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc    584422 Feb  1 22:04 pilot3.tar.gz
[2026-02-02 05:50:40] -rwx------ 1 boinc boinc     36322 Feb  1 22:07 runpilot2-wrapper.sh
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc      5111 Feb  1 22:10 queuedata.json
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc       100 Feb  2 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 05:50:40] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 05:03 run_atlas
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc       105 Feb  2 05:03 job.xml
[2026-02-02 05:50:40] -rw-r--r-- 2 boinc boinc 491604740 Feb  2 05:03 EVNT.48310747._000072.pool.root.1
[2026-02-02 05:50:40] -rw-r--r-- 2 boinc boinc     15845 Feb  2 05:03 start_atlas.sh
[2026-02-02 05:50:40] drwxrwx--x 2 boinc boinc      4096 Feb  2 05:03 shared
[2026-02-02 05:50:40] -rw-r--r-- 2 boinc boinc    597761 Feb  2 05:03 input.tar.gz
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc      9416 Feb  2 05:03 init_data.xml
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc         0 Feb  2 05:03 boinc_setup_complete
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc         0 Feb  2 05:03 boinc_lockfile
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc      2523 Feb  2 05:03 pandaJob.out
[2026-02-02 05:50:40] -rw------- 1 boinc boinc   1009823 Feb  2 05:03 agis_schedconf.cvmfs.json
[2026-02-02 05:50:40] -rw------- 1 boinc boinc   1511668 Feb  2 05:03 agis_ddmendpoints.agis.ALL.json
[2026-02-02 05:50:40] -rw------- 1 boinc boinc       421 Feb  2 05:03 workernode_map.json
[2026-02-02 05:50:40] drwx------ 5 boinc boinc      4096 Feb  2 05:03 pilot3
[2026-02-02 05:50:40] -rw------- 1 boinc boinc 179534480 Feb  2 05:49 HITS.48310749._003569.pool.root.1
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc       531 Feb  2 05:49 boinc_task_state.xml
[2026-02-02 05:50:40] -rw------- 1 boinc boinc      1029 Feb  2 05:49 memory_monitor_summary.json
[2026-02-02 05:50:40] -rw------- 1 boinc boinc    366671 Feb  2 05:49 log.48310749._003569.job.log.tgz.1
[2026-02-02 05:50:40] -rw------- 1 boinc boinc      6291 Feb  2 05:49 heartbeat.json
[2026-02-02 05:50:40] -rw------- 1 boinc boinc        95 Feb  2 05:50 pilot_heartbeat.json
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc      8192 Feb  2 05:50 boinc_mmap_file
[2026-02-02 05:50:40] -rw------- 1 boinc boinc      5009 Feb  2 05:50 pilotlog.txt
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc        27 Feb  2 05:50 wrapper_checkpoint.txt
[2026-02-02 05:50:40] -rw------- 1 boinc boinc    418676 Feb  2 05:50 log.48310749._003569.job.log.1
[2026-02-02 05:50:40] -rw------- 1 boinc boinc       357 Feb  2 05:50 output.list
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc       620 Feb  2 05:50 runtime_log
[2026-02-02 05:50:40] -rw------- 1 boinc boinc    798720 Feb  2 05:50 result.tar.gz
[2026-02-02 05:50:40] -rw------- 1 boinc boinc       643 Feb  2 05:50 yReLDmwmu68n9Rq4apOajLDm4fhM0noT9bVooX4SDmQ0QKDmhjJuGn.diag
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc      8771 Feb  2 05:50 runtime_log.err
[2026-02-02 05:50:40] -rw-r--r-- 1 boinc boinc     21466 Feb  2 05:50 stderr.txt
[2026-02-02 05:50:40] HITS file was successfully produced:
[2026-02-02 05:50:40] -rw------- 1 boinc boinc 179534480 Feb  2 05:49 shared/HITS.pool.root.1
[2026-02-02 05:50:40]  *** Contents of shared directory: ***
[2026-02-02 05:50:40] total 656800
[2026-02-02 05:50:40] -rw-r--r-- 2 boinc boinc 491604740 Feb  2 05:03 ATLAS.root_0
[2026-02-02 05:50:40] -rw-r--r-- 2 boinc boinc     15845 Feb  2 05:03 start_atlas.sh
[2026-02-02 05:50:40] -rw-r--r-- 2 boinc boinc    597761 Feb  2 05:03 input.tar.gz
[2026-02-02 05:50:40] -rw------- 1 boinc boinc 179534480 Feb  2 05:49 HITS.pool.root.1
[2026-02-02 05:50:40] -rw------- 1 boinc boinc    798720 Feb  2 05:50 result.tar.gz
05:50:42 (3144920): run_atlas exited; CPU time 29095.979980
05:50:42 (3144920): called boinc_finish(0)

</stderr_txt>
]]>

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