Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:35:04 (861405): wrapper (7.7.26015): starting
16:35:04 (861405): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 16:35:04] Arguments: --nthreads 4
[2026-02-02 16:35:04] Threads: 4
[2026-02-02 16:35:04] Checking for CVMFS
[2026-02-02 16:35:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 16:35:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 16:35:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 16:35:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 16:35:04] 2.9.2.0 3785696 7163 100976 155792 0 50 23870314 36864000 0 130560 0 3589022 99.987 232073 14378 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 16:35:04] CVMFS is ok
[2026-02-02 16:35:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 16:35:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 16:35:04] Further information can be found at the LHC@home message board.
[2026-02-02 16:35:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 16:35:04] Checking for apptainer binary...
[2026-02-02 16:35:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 16:35:04] Running /usr/bin/apptainer --version
[2026-02-02 16:35:04] apptainer version 1.4.1-1.1
[2026-02-02 16:35:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 16:35:04] cosA131
[2026-02-02 16:35:04] apptainer works
[2026-02-02 16:35:04] Set ATHENA_PROC_NUMBER=4
[2026-02-02 16:35:04] Set ATHENA_CORE_NUMBER=4
[2026-02-02 16:35:04] Starting ATLAS job with PandaID=6996293545
[2026-02-02 16:35:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 17:52:27]  *** The last 200 lines of the pilot log: ***
[2026-02-02 17:52:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 17:52:27]  replicas=None
[2026-02-02 17:52:27]  scope=mc23_13p6TeV
[2026-02-02 17:52:27]  status=None
[2026-02-02 17:52:27]  status_code=0
[2026-02-02 17:52:27]  storage_token=
[2026-02-02 17:52:27]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6996293545/log.48317892._008510.job.log.tgz.1
[2026-02-02 17:52:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/f5/log.48317892._008510.job.log.tgz.1
[2026-02-02 17:52:27]  workdir=None
[2026-02-02 17:52:27] ]
[2026-02-02 17:52:27] 2026-02-02 16:51:35,263 | INFO     | transferring file log.48317892._008510.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6996293545/log.48317892._008510.job.log.tgz.1 to /local/data/boinc/
[2026-02-02 17:52:27] 2026-02-02 16:51:35,263 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6996293545/log.48317892._008510.job.log.tgz.1 /local/data/boinc/slots/0/log.48317892._0085
[2026-02-02 17:52:27] 2026-02-02 16:51:35,280 | INFO     | adding to output.list: log.48317892._008510.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/f5/log.48317892._008510.job.log.tg
[2026-02-02 17:52:27] 2026-02-02 16:51:35,281 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 17:52:27] 2026-02-02 16:51:35,281 | INFO     | summary of transferred files:
[2026-02-02 17:52:27] 2026-02-02 16:51:35,281 | INFO     |  -- lfn=log.48317892._008510.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 17:52:27] 2026-02-02 16:51:35,281 | INFO     | stage-out finished correctly
[2026-02-02 17:52:27] 2026-02-02 16:51:36,113 | INFO     | time since job start (4580s) is within the limit (349056.0s)
[2026-02-02 17:52:27] 2026-02-02 16:51:37,957 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 17:52:27] 2026-02-02 16:51:38,119 | INFO     | time since job start (4582s) is within the limit (349056.0s)
[2026-02-02 17:52:27] 2026-02-02 16:51:38,195 | WARNING  | process 870031 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 17:52:27] 2026-02-02 16:51:38,195 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6996293545/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 17:52:27] 2026-02-02 16:51:38,232 | INFO     | number of running child processes to parent process 870031: 1
[2026-02-02 17:52:27] 2026-02-02 16:51:38,232 | INFO     | maximum number of monitored processes: 6
[2026-02-02 17:52:27] 2026-02-02 16:51:40,125 | INFO     | time since job start (4584s) is within the limit (349056.0s)
[2026-02-02 17:52:27] 2026-02-02 16:51:40,126 | INFO     | 4588s have passed since pilot start - server update state is 'RUNNING'
[2026-02-02 17:52:27] 2026-02-02 16:51:40,736 | INFO     | monitor loop #354: job 0:6996293545 is in state 'finished'
[2026-02-02 17:52:27] 2026-02-02 16:51:40,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 17:52:27] 2026-02-02 16:51:40,858 | INFO     | job 6996293545 has state=finished
[2026-02-02 17:52:27] 2026-02-02 16:51:40,858 | INFO     | preparing for final server update for job 6996293545 in state='finished'
[2026-02-02 17:52:27] 2026-02-02 16:51:41,439 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,439 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6996293545/jobReport.json
[2026-02-02 17:52:27] 2026-02-02 16:51:41,440 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-02 17:52:27] 2026-02-02 16:51:41,440 | INFO     | this job has now completed (state=finished)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,441 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,441 | INFO     | log transfer has been attempted: DONE
[2026-02-02 17:52:27] 2026-02-02 16:51:41,441 | INFO     | job 6996293545 has finished - writing final server update
[2026-02-02 17:52:27] 2026-02-02 16:51:41,441 | INFO     | total number of processed events: 400 (read)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,442 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6996293545/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,443 | INFO     | extracted standard info from prmon json
[2026-02-02 17:52:27] 2026-02-02 16:51:41,443 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 17:52:27] 2026-02-02 16:51:41,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 17:52:27] 2026-02-02 16:51:41,443 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 17:52:27] 2026-02-02 16:51:41,443 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | fitting pss+swap vs Time
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | sum of square deviations: 97479037.0
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | sum of deviations: -10187127886.5
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | mean x: 1770048883.5
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | mean y: 2537829.25
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | intersect: 184982969484.22253
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | chi2: 0.04108690654505763
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | current memory leak: -104.51 B/s (using 68 data points, chi2=0.04)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | could have reported an average CPU frequency of 3832 MHz (6 samples)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | ..............................
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | . Timing measurements:
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | . get job = 0 s
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | . initial setup = 4 s
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | . payload setup = 3 s
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | . stage-in = 0 s
[2026-02-02 17:52:27] 2026-02-02 16:51:41,444 | INFO     | . payload execution = 4560 s
[2026-02-02 17:52:27] 2026-02-02 16:51:41,445 | INFO     | . stage-out = 0 s
[2026-02-02 17:52:27] 2026-02-02 16:51:41,445 | INFO     | . log creation = 0 s
[2026-02-02 17:52:27] 2026-02-02 16:51:41,445 | INFO     | ..............................
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | 
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | job summary report
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | --------------------------------------------------
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | PanDA job id: 6996293545
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | task id: 48317892
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | errors: (none)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | pilot state: finished 
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | transexitcode: 0
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | exeerrorcode: 0
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | exeerrordiag: 
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | exitcode: 0
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | exitmsg: OK
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | cpuconsumptiontime: 17156 s
[2026-02-02 17:52:27] 2026-02-02 16:51:41,480 | INFO     | nevents: 400
[2026-02-02 17:52:27] 2026-02-02 16:51:41,481 | INFO     | neventsw: 0
[2026-02-02 17:52:27] 2026-02-02 16:51:41,481 | INFO     | pid: 870031
[2026-02-02 17:52:27] 2026-02-02 16:51:41,481 | INFO     | pgrp: 870031
[2026-02-02 17:52:27] 2026-02-02 16:51:41,481 | INFO     | corecount: 4
[2026-02-02 17:52:27] 2026-02-02 16:51:41,481 | INFO     | event service: False
[2026-02-02 17:52:27] 2026-02-02 16:51:41,481 | INFO     | sizes: {0: 2278220, 11: 2278220, 4567: 2304539, 4568: 2313543, 4571: 2313599, 4574: 2313793}
[2026-02-02 17:52:27] 2026-02-02 16:51:41,481 | INFO     | --------------------------------------------------
[2026-02-02 17:52:27] 2026-02-02 16:51:41,481 | INFO     | 
[2026-02-02 17:52:27] 2026-02-02 16:51:41,481 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-02 17:52:27] 2026-02-02 16:51:41,498 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,498 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,498 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,498 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | job 6996293545 has completed (purged errors)
[2026-02-02 17:52:27] 2026-02-02 16:51:41,499 | INFO     | overall cleanup function is called
[2026-02-02 17:52:27] 2026-02-02 16:51:42,506 | INFO     | --- collectZombieJob: --- 10, [870031]
[2026-02-02 17:52:27] 2026-02-02 16:51:42,506 | INFO     | zombie collector waiting for pid 870031
[2026-02-02 17:52:27] 2026-02-02 16:51:42,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 17:52:27] 2026-02-02 16:51:42,506 | INFO     | collected zombie processes
[2026-02-02 17:52:27] 2026-02-02 16:51:42,506 | INFO     | will attempt to kill all subprocesses of pid=870031
[2026-02-02 17:52:27] 2026-02-02 16:51:42,547 | INFO     | process IDs to be killed: [870031] (in reverse order)
[2026-02-02 17:52:27] 2026-02-02 16:51:42,578 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 17:52:27] 2026-02-02 16:51:42,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 17:52:27] 2026-02-02 16:51:42,580 | INFO     | did not find any defunct processes belonging to 870031
[2026-02-02 17:52:27] 2026-02-02 16:51:42,581 | INFO     | did not find any defunct processes belonging to 870031
[2026-02-02 17:52:27] 2026-02-02 16:51:42,581 | INFO     | ready for new job
[2026-02-02 17:52:27] 2026-02-02 16:51:42,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 17:52:27] 2026-02-02 16:51:42,582 | INFO     | **************************************
[2026-02-02 17:52:27] 2026-02-02 16:51:42,582 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 17:52:27] 2026-02-02 16:51:42,582 | INFO     | **************************************
[2026-02-02 17:52:27] 2026-02-02 16:51:42,582 | INFO     | 
[2026-02-02 17:52:27] 2026-02-02 16:51:42,583 | INFO     | architecture information:
[2026-02-02 17:52:27] 2026-02-02 16:51:42,583 | INFO     | executing command: cat /etc/os-release
[2026-02-02 17:52:27] 2026-02-02 16:51:42,597 | INFO     | cat /etc/os-release:
[2026-02-02 17:52:27] NAME="CentOS Linux"
[2026-02-02 17:52:27] VERSION="7 (Core)"
[2026-02-02 17:52:27] ID="centos"
[2026-02-02 17:52:27] ID_LIKE="rhel fedora"
[2026-02-02 17:52:27] VERSION_ID="7"
[2026-02-02 17:52:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 17:52:27] ANSI_COLOR="0;31"
[2026-02-02 17:52:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 17:52:27] HOME_URL="https://www.centos.org/"
[2026-02-02 17:52:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 17:52:27] 
[2026-02-02 17:52:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 17:52:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 17:52:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 17:52:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 17:52:27] 
[2026-02-02 17:52:27] 2026-02-02 16:51:42,597 | INFO     | **************************************
[2026-02-02 17:52:27] 2026-02-02 16:51:43,100 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-02 17:52:27] 2026-02-02 16:51:43,117 | INFO     | sufficient remaining disk space (332128059392 B)
[2026-02-02 17:52:27] 2026-02-02 16:51:43,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 17:52:27] 2026-02-02 16:51:43,118 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 17:52:27] 2026-02-02 16:51:43,118 | INFO     | update_server=False
[2026-02-02 17:52:27] 2026-02-02 16:51:43,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 17:52:27] 2026-02-02 16:51:43,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 17:52:27] 2026-02-02 16:51:43,240 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 17:52:27] 2026-02-02 16:51:43,240 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 17:52:27] 2026-02-02 16:51:43,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 17:52:27] 2026-02-02 16:51:43,240 | INFO     | will abort loop
[2026-02-02 17:52:27] 2026-02-02 16:51:43,242 | INFO     | all payload control threads have been joined
[2026-02-02 17:52:27] 2026-02-02 16:51:43,314 | INFO     | all job control threads have been joined
[2026-02-02 17:52:27] 2026-02-02 16:51:43,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 17:52:27] 2026-02-02 16:51:43,491 | INFO     | all data control threads have been joined
[2026-02-02 17:52:27] 2026-02-02 16:51:44,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 17:52:27] 2026-02-02 16:51:44,123 | INFO     | [job] queue monitor thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:44,124 | INFO     | [job] retrieve thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:44,246 | INFO     | [job] job monitor thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:44,248 | INFO     | [payload] control thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:44,320 | INFO     | [job] control thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:44,451 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:44,497 | INFO     | [data] control thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:45,085 | INFO     | [payload] validate_post thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:45,140 | INFO     | [job] validate thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:45,244 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:45,279 | INFO     | [payload] failed_post thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:45,336 | INFO     | [data] copytool_out thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:45,338 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:45,488 | INFO     | [data] copytool_in thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:48,009 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:51:53,578 | INFO     | job.realtimelogging is not enabled
[2026-02-02 17:52:27] 2026-02-02 16:51:54,579 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 17:52:27] 2026-02-02 16:52:13,241 | INFO     | PID=865516 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 17:52:27] 2026-02-02 16:52:13,241 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 17:52:27] 2026-02-02 16:52:13,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 17:52:27] 2026-02-02 16:52:13,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 17:52:27] 2026-02-02 16:52:21,690 | INFO     | [monitor] cgroup control has ended
[2026-02-02 17:52:27] 2026-02-02 16:52:22,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140367153268544)>', '<ExcThread(monitor, started 140366795740928)>']
[2026-02-02 17:52:27] 2026-02-02 16:52:22,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 17:52:27] 2026-02-02 16:52:22,289 | INFO     | [monitor] control thread has ended
[2026-02-02 17:52:27] 2026-02-02 16:52:27,038 | INFO     | all workflow threads have been joined
[2026-02-02 17:52:27] 2026-02-02 16:52:27,038 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 17:52:27] 2026-02-02 16:52:27,038 | INFO     | traces error code: 0
[2026-02-02 17:52:27] 2026-02-02 16:52:27,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 17:52:27] 2026-02-02 16:52:27,118 [wrapper] ==== pilot stdout END ====
[2026-02-02 17:52:27] 2026-02-02 16:52:27,121 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 17:52:27] 2026-02-02 16:52:27,125 [wrapper] pilotpid: 865516
[2026-02-02 17:52:27] 2026-02-02 16:52:27,129 [wrapper] Pilot exit status: 0
[2026-02-02 17:52:27] 2026-02-02 16:52:27,139 [wrapper] pandaids: 6996293545
[2026-02-02 17:52:27] 2026-02-02 16:52:27,159 [wrapper] cleanup supervisor_pilot  875147 865517
[2026-02-02 17:52:27] 2026-02-02 16:52:27,163 [wrapper] Test setup, not cleaning
[2026-02-02 17:52:27] 2026-02-02 16:52:27,166 [wrapper] apfmon messages muted
[2026-02-02 17:52:27] 2026-02-02 16:52:27,170 [wrapper] ==== wrapper stdout END ====
[2026-02-02 17:52:27] 2026-02-02 16:52:27,174 [wrapper] ==== wrapper stderr END ====
[2026-02-02 17:52:27]  *** Error codes and diagnostics ***
[2026-02-02 17:52:27]     "exeErrorCode": 0,
[2026-02-02 17:52:27]     "exeErrorDiag": "",
[2026-02-02 17:52:27]     "pilotErrorCode": 0,
[2026-02-02 17:52:27]     "pilotErrorDiag": "",
[2026-02-02 17:52:27]  *** Listing of results directory ***
[2026-02-02 17:52:27] total 666680
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc    584422 Feb  1 23:04 pilot3.tar.gz
[2026-02-02 17:52:27] -rwx------ 1 boinc boinc     36322 Feb  1 23:05 runpilot2-wrapper.sh
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc      5111 Feb  1 23:06 queuedata.json
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc       100 Feb  2 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 17:52:27] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 16:35 run_atlas
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc       105 Feb  2 16:35 job.xml
[2026-02-02 17:52:27] -rw-r--r-- 2 boinc boinc 492275632 Feb  2 16:35 EVNT.48317889._000164.pool.root.1
[2026-02-02 17:52:27] -rw-r--r-- 2 boinc boinc    597754 Feb  2 16:35 input.tar.gz
[2026-02-02 17:52:27] -rw-r--r-- 2 boinc boinc     15845 Feb  2 16:35 start_atlas.sh
[2026-02-02 17:52:27] drwxrwx--x 2 boinc boinc      4096 Feb  2 16:35 shared
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc         0 Feb  2 16:35 boinc_setup_complete
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc      6377 Feb  2 16:35 init_data.xml
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc         0 Feb  2 16:35 boinc_lockfile
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc      2519 Feb  2 16:35 pandaJob.out
[2026-02-02 17:52:27] -rw------- 1 boinc boinc   1009772 Feb  2 16:35 agis_schedconf.cvmfs.json
[2026-02-02 17:52:27] -rw------- 1 boinc boinc   1511668 Feb  2 16:35 agis_ddmendpoints.agis.ALL.json
[2026-02-02 17:52:27] -rw------- 1 boinc boinc       421 Feb  2 16:35 workernode_map.json
[2026-02-02 17:52:27] drwx------ 5 boinc boinc      4096 Feb  2 16:35 pilot3
[2026-02-02 17:52:27] -rw------- 1 boinc boinc 184616868 Feb  2 17:51 HITS.48317892._008510.pool.root.1
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc       530 Feb  2 17:51 boinc_task_state.xml
[2026-02-02 17:52:27] -rw------- 1 boinc boinc      1016 Feb  2 17:51 memory_monitor_summary.json
[2026-02-02 17:52:27] -rw------- 1 boinc boinc        95 Feb  2 17:51 pilot_heartbeat.json
[2026-02-02 17:52:27] -rw------- 1 boinc boinc    249083 Feb  2 17:51 log.48317892._008510.job.log.tgz.1
[2026-02-02 17:52:27] -rw------- 1 boinc boinc      6304 Feb  2 17:51 heartbeat.json
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc        27 Feb  2 17:51 wrapper_checkpoint.txt
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc      8192 Feb  2 17:51 boinc_mmap_file
[2026-02-02 17:52:27] -rw------- 1 boinc boinc      5005 Feb  2 17:52 pilotlog.txt
[2026-02-02 17:52:27] -rw------- 1 boinc boinc    675524 Feb  2 17:52 log.48317892._008510.job.log.1
[2026-02-02 17:52:27] -rw------- 1 boinc boinc       357 Feb  2 17:52 output.list
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc       620 Feb  2 17:52 runtime_log
[2026-02-02 17:52:27] -rw------- 1 boinc boinc    942080 Feb  2 17:52 result.tar.gz
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc      8901 Feb  2 17:52 runtime_log.err
[2026-02-02 17:52:27] -rw------- 1 boinc boinc       658 Feb  2 17:52 KPvNDmnku68n9Rq4apOajLDm4fhM0noT9bVooX4SDmOuQKDm7RjSBn.diag
[2026-02-02 17:52:27] -rw-r--r-- 1 boinc boinc     21878 Feb  2 17:52 stderr.txt
[2026-02-02 17:52:27] HITS file was successfully produced:
[2026-02-02 17:52:27] -rw------- 1 boinc boinc 184616868 Feb  2 17:51 shared/HITS.pool.root.1
[2026-02-02 17:52:27]  *** Contents of shared directory: ***
[2026-02-02 17:52:27] total 662560
[2026-02-02 17:52:27] -rw-r--r-- 2 boinc boinc 492275632 Feb  2 16:35 ATLAS.root_0
[2026-02-02 17:52:27] -rw-r--r-- 2 boinc boinc    597754 Feb  2 16:35 input.tar.gz
[2026-02-02 17:52:27] -rw-r--r-- 2 boinc boinc     15845 Feb  2 16:35 start_atlas.sh
[2026-02-02 17:52:27] -rw------- 1 boinc boinc 184616868 Feb  2 17:51 HITS.pool.root.1
[2026-02-02 17:52:27] -rw------- 1 boinc boinc    942080 Feb  2 17:52 result.tar.gz
17:52:28 (861405): run_atlas exited; CPU time 17178.182333
17:52:28 (861405): called boinc_finish(0)

</stderr_txt>
]]>

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