Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:04:20 (2461099): wrapper (7.7.26015): starting
09:04:20 (2461099): wrapper: running run_atlas (--nthreads 3)
[2026-02-02 09:04:20] Arguments: --nthreads 3
[2026-02-02 09:04:20] Threads: 3
[2026-02-02 09:04:20] Checking for CVMFS
[2026-02-02 09:04:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 09:04:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 09:04:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 09:04:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 09:04:21] 2.9.2.0 1473095 6958 72572 155779 3 50 21977986 36864000 0 130560 0 2813495 99.985 217962 14695 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 09:04:21] CVMFS is ok
[2026-02-02 09:04:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 09:04:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 09:04:21] Further information can be found at the LHC@home message board.
[2026-02-02 09:04:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 09:04:21] Checking for apptainer binary...
[2026-02-02 09:04:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 09:04:21] Running /usr/bin/apptainer --version
[2026-02-02 09:04:21] apptainer version 1.3.6-6.1
[2026-02-02 09:04:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 09:04:22] atlasA226
[2026-02-02 09:04:22] apptainer works
[2026-02-02 09:04:22] Set ATHENA_PROC_NUMBER=3
[2026-02-02 09:04:22] Set ATHENA_CORE_NUMBER=3
[2026-02-02 09:04:22] Starting ATLAS job with PandaID=6996292763
[2026-02-02 09:04:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 10:43:57]  *** The last 200 lines of the pilot log: ***
[2026-02-02 10:43:57]  filesize=294180
[2026-02-02 10:43:57]  filetype=log
[2026-02-02 10:43:57]  guid=729e29d2-f69b-40c6-b2f6-70e716e096f5
[2026-02-02 10:43:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 10:43:57]  is_altstaged=None
[2026-02-02 10:43:57]  is_tar=False
[2026-02-02 10:43:57]  lfn=log.48317892._007943.job.log.tgz.1
[2026-02-02 10:43:57]  mtime=0
[2026-02-02 10:43:57]  protocol_id=None
[2026-02-02 10:43:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 10:43:57]  replicas=None
[2026-02-02 10:43:57]  scope=mc23_13p6TeV
[2026-02-02 10:43:57]  status=None
[2026-02-02 10:43:57]  status_code=0
[2026-02-02 10:43:57]  storage_token=
[2026-02-02 10:43:57]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6996292763/log.48317892._007943.job.log.tgz.1
[2026-02-02 10:43:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/ad/log.48317892._007943.job.log.tgz.1
[2026-02-02 10:43:57]  workdir=None
[2026-02-02 10:43:57] ]
[2026-02-02 10:43:57] 2026-02-02 09:43:21,081 | INFO     | transferring file log.48317892._007943.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6996292763/log.48317892._007943.job.log.tgz.1 to /local/data/boinc/
[2026-02-02 10:43:57] 2026-02-02 09:43:21,082 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6996292763/log.48317892._007943.job.log.tgz.1 /local/data/boinc/slots/0/log.48317892._0079
[2026-02-02 10:43:57] 2026-02-02 09:43:21,094 | INFO     | adding to output.list: log.48317892._007943.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/ad/log.48317892._007943.job.log.tg
[2026-02-02 10:43:57] 2026-02-02 09:43:21,094 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 10:43:57] 2026-02-02 09:43:21,094 | INFO     | summary of transferred files:
[2026-02-02 10:43:57] 2026-02-02 09:43:21,094 | INFO     |  -- lfn=log.48317892._007943.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 10:43:57] 2026-02-02 09:43:21,094 | INFO     | stage-out finished correctly
[2026-02-02 10:43:57] 2026-02-02 09:43:21,749 | INFO     | time since job start (5923s) is within the limit (349056.0s)
[2026-02-02 10:43:57] 2026-02-02 09:43:21,819 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 10:43:57] 2026-02-02 09:43:23,196 | INFO     | monitor loop #457: job 0:6996292763 is in state 'finished'
[2026-02-02 10:43:57] 2026-02-02 09:43:23,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 10:43:57] 2026-02-02 09:43:23,756 | INFO     | time since job start (5925s) is within the limit (349056.0s)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,607 | INFO     | job 6996292763 has state=finished
[2026-02-02 10:43:57] 2026-02-02 09:43:24,607 | INFO     | preparing for final server update for job 6996292763 in state='finished'
[2026-02-02 10:43:57] 2026-02-02 09:43:24,608 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6996292763/jobReport.json
[2026-02-02 10:43:57] 2026-02-02 09:43:24,612 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-02 10:43:57] 2026-02-02 09:43:24,612 | INFO     | this job has now completed (state=finished)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,612 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,613 | INFO     | log transfer has been attempted: DONE
[2026-02-02 10:43:57] 2026-02-02 09:43:24,613 | INFO     | job 6996292763 has finished - writing final server update
[2026-02-02 10:43:57] 2026-02-02 09:43:24,613 | INFO     | total number of processed events: 400 (read)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,614 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6996292763/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,614 | INFO     | extracted standard info from prmon json
[2026-02-02 10:43:57] 2026-02-02 09:43:24,614 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 10:43:57] 2026-02-02 09:43:24,614 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 10:43:57] 2026-02-02 09:43:24,614 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 10:43:57] 2026-02-02 09:43:24,614 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | fitting pss+swap vs Time
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | sum of square deviations: 226022842.5
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | sum of deviations: -4385151011.500001
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | mean x: 1770022517.5
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | mean y: 2377355.7444444443
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | intersect: 34343225152.988228
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | chi2: 0.11407057377946601
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | current memory leak: -19.40 B/s (using 90 data points, chi2=0.11)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | could have reported an average CPU frequency of 4337 MHz (7 samples)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | ..............................
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | . Timing measurements:
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | . get job = 0 s
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | . initial setup = 6 s
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | . payload setup = 6 s
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | . stage-in = 0 s
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | . payload execution = 5901 s
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | . stage-out = 0 s
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | . log creation = 0 s
[2026-02-02 10:43:57] 2026-02-02 09:43:24,615 | INFO     | ..............................
[2026-02-02 10:43:57] 2026-02-02 09:43:24,642 | INFO     | 
[2026-02-02 10:43:57] 2026-02-02 09:43:24,642 | INFO     | job summary report
[2026-02-02 10:43:57] 2026-02-02 09:43:24,642 | INFO     | --------------------------------------------------
[2026-02-02 10:43:57] 2026-02-02 09:43:24,642 | INFO     | PanDA job id: 6996292763
[2026-02-02 10:43:57] 2026-02-02 09:43:24,642 | INFO     | task id: 48317892
[2026-02-02 10:43:57] 2026-02-02 09:43:24,642 | INFO     | errors: (none)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,642 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 10:43:57] 2026-02-02 09:43:24,642 | INFO     | pilot state: finished 
[2026-02-02 10:43:57] 2026-02-02 09:43:24,642 | INFO     | transexitcode: 0
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | exeerrorcode: 0
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | exeerrordiag: 
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | exitcode: 0
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | exitmsg: OK
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | cpuconsumptiontime: 16925 s
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | nevents: 400
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | neventsw: 0
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | pid: 2469578
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | pgrp: 2469578
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | corecount: 3
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | event service: False
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | sizes: {0: 2278225, 11: 2278225, 5910: 2305064, 5911: 2314123, 5912: 2314123, 5915: 2314317}
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | --------------------------------------------------
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | 
[2026-02-02 10:43:57] 2026-02-02 09:43:24,643 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 10:43:57] 2026-02-02 09:43:24,656 | INFO     | job 6996292763 has completed (purged errors)
[2026-02-02 10:43:57] 2026-02-02 09:43:24,657 | INFO     | overall cleanup function is called
[2026-02-02 10:43:57] 2026-02-02 09:43:24,852 | INFO     | PID=2465146 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 10:43:57] 2026-02-02 09:43:25,663 | INFO     | --- collectZombieJob: --- 10, [2469578]
[2026-02-02 10:43:57] 2026-02-02 09:43:25,663 | INFO     | zombie collector waiting for pid 2469578
[2026-02-02 10:43:57] 2026-02-02 09:43:25,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 10:43:57] 2026-02-02 09:43:25,664 | INFO     | collected zombie processes
[2026-02-02 10:43:57] 2026-02-02 09:43:25,664 | INFO     | will attempt to kill all subprocesses of pid=2469578
[2026-02-02 10:43:57] 2026-02-02 09:43:25,703 | INFO     | process IDs to be killed: [2469578] (in reverse order)
[2026-02-02 10:43:57] 2026-02-02 09:43:25,730 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 10:43:57] 2026-02-02 09:43:25,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 10:43:57] 2026-02-02 09:43:25,731 | INFO     | did not find any defunct processes belonging to 2469578
[2026-02-02 10:43:57] 2026-02-02 09:43:25,732 | INFO     | did not find any defunct processes belonging to 2469578
[2026-02-02 10:43:57] 2026-02-02 09:43:25,732 | INFO     | ready for new job
[2026-02-02 10:43:57] 2026-02-02 09:43:25,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 10:43:57] 2026-02-02 09:43:25,733 | INFO     | **************************************
[2026-02-02 10:43:57] 2026-02-02 09:43:25,733 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 10:43:57] 2026-02-02 09:43:25,733 | INFO     | **************************************
[2026-02-02 10:43:57] 2026-02-02 09:43:25,733 | INFO     | 
[2026-02-02 10:43:57] 2026-02-02 09:43:25,733 | INFO     | architecture information:
[2026-02-02 10:43:57] 2026-02-02 09:43:25,733 | INFO     | executing command: cat /etc/os-release
[2026-02-02 10:43:57] 2026-02-02 09:43:25,744 | INFO     | cat /etc/os-release:
[2026-02-02 10:43:57] NAME="CentOS Linux"
[2026-02-02 10:43:57] VERSION="7 (Core)"
[2026-02-02 10:43:57] ID="centos"
[2026-02-02 10:43:57] ID_LIKE="rhel fedora"
[2026-02-02 10:43:57] VERSION_ID="7"
[2026-02-02 10:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 10:43:57] ANSI_COLOR="0;31"
[2026-02-02 10:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 10:43:57] HOME_URL="https://www.centos.org/"
[2026-02-02 10:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 10:43:57] 
[2026-02-02 10:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 10:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 10:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 10:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 10:43:57] 
[2026-02-02 10:43:57] 2026-02-02 09:43:25,744 | INFO     | **************************************
[2026-02-02 10:43:57] 2026-02-02 09:43:26,247 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-02 10:43:57] 2026-02-02 09:43:26,261 | INFO     | sufficient remaining disk space (332951191552 B)
[2026-02-02 10:43:57] 2026-02-02 09:43:26,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 10:43:57] 2026-02-02 09:43:26,261 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 10:43:57] 2026-02-02 09:43:26,261 | INFO     | update_server=False
[2026-02-02 10:43:57] 2026-02-02 09:43:26,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 10:43:57] 2026-02-02 09:43:26,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 10:43:57] 2026-02-02 09:43:26,410 | INFO     | all data control threads have been joined
[2026-02-02 10:43:57] 2026-02-02 09:43:26,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 10:43:57] 2026-02-02 09:43:26,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 10:43:57] 2026-02-02 09:43:26,706 | INFO     | aborting loop
[2026-02-02 10:43:57] 2026-02-02 09:43:27,196 | INFO     | all job control threads have been joined
[2026-02-02 10:43:57] 2026-02-02 09:43:27,260 | INFO     | all payload control threads have been joined
[2026-02-02 10:43:57] 2026-02-02 09:43:27,267 | INFO     | [job] queue monitor thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:27,268 | INFO     | [job] retrieve thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:27,279 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:27,412 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:27,415 | INFO     | [data] control thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:27,494 | INFO     | [payload] failed_post thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:27,712 | INFO     | [job] job monitor thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:27,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 10:43:57] 2026-02-02 09:43:27,952 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:28,044 | INFO     | [payload] validate_post thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:28,202 | INFO     | [job] control thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:28,266 | INFO     | [payload] control thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:28,641 | INFO     | [data] copytool_out thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:28,712 | INFO     | [job] validate thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:28,721 | INFO     | [data] copytool_in thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:28,765 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:31,866 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 10:43:57] 2026-02-02 09:43:46,741 | INFO     | [monitor] cgroup control has ended
[2026-02-02 10:43:57] 2026-02-02 09:43:46,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140632257455936)>', '<ExcThread(monitor, started 140631313737472)>']
[2026-02-02 10:43:57] 2026-02-02 09:43:51,825 | INFO     | all workflow threads have been joined
[2026-02-02 10:43:57] 2026-02-02 09:43:51,825 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 10:43:57] 2026-02-02 09:43:51,826 | INFO     | traces error code: 0
[2026-02-02 10:43:57] 2026-02-02 09:43:51,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 10:43:57] 2026-02-02 09:43:56,966 | INFO     | PID=2465146 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 10:43:57] 2026-02-02 09:43:56,968 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 10:43:57] 2026-02-02 09:43:56,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 10:43:57] 2026-02-02 09:43:56,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 10:43:57] 2026-02-02 09:43:56,968 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 10:43:57] 2026-02-02 09:43:56,968 | INFO     | [monitor] control thread has ended
[2026-02-02 10:43:57] 2026-02-02 09:43:57,017 [wrapper] ==== pilot stdout END ====
[2026-02-02 10:43:57] 2026-02-02 09:43:57,020 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 10:43:57] 2026-02-02 09:43:57,023 [wrapper] pilotpid: 2465146
[2026-02-02 10:43:57] 2026-02-02 09:43:57,025 [wrapper] Pilot exit status: 0
[2026-02-02 10:43:57] 2026-02-02 09:43:57,033 [wrapper] pandaids: 6996292763
[2026-02-02 10:43:57] 2026-02-02 09:43:57,049 [wrapper] cleanup supervisor_pilot 2474858 2465147
[2026-02-02 10:43:57] 2026-02-02 09:43:57,052 [wrapper] Test setup, not cleaning
[2026-02-02 10:43:57] 2026-02-02 09:43:57,054 [wrapper] apfmon messages muted
[2026-02-02 10:43:57] 2026-02-02 09:43:57,057 [wrapper] ==== wrapper stdout END ====
[2026-02-02 10:43:57] 2026-02-02 09:43:57,059 [wrapper] ==== wrapper stderr END ====
[2026-02-02 10:43:57]  *** Error codes and diagnostics ***
[2026-02-02 10:43:57]     "exeErrorCode": 0,
[2026-02-02 10:43:57]     "exeErrorDiag": "",
[2026-02-02 10:43:57]     "pilotErrorCode": 0,
[2026-02-02 10:43:57]     "pilotErrorDiag": "",
[2026-02-02 10:43:57]  *** Listing of results directory ***
[2026-02-02 10:43:57] total 668272
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc    584422 Feb  1 23:04 pilot3.tar.gz
[2026-02-02 10:43:57] -rwx------ 1 boinc boinc     36322 Feb  1 23:07 runpilot2-wrapper.sh
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc      5111 Feb  1 23:09 queuedata.json
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc       100 Feb  2 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 10:43:57] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 09:04 run_atlas
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc       105 Feb  2 09:04 job.xml
[2026-02-02 10:43:57] -rw-r--r-- 2 boinc boinc 496293694 Feb  2 09:04 EVNT.48317889._000152.pool.root.1
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc      6680 Feb  2 09:04 init_data.xml
[2026-02-02 10:43:57] drwxrwx--x 2 boinc boinc      4096 Feb  2 09:04 shared
[2026-02-02 10:43:57] -rw-r--r-- 2 boinc boinc    597762 Feb  2 09:04 input.tar.gz
[2026-02-02 10:43:57] -rw-r--r-- 2 boinc boinc     15845 Feb  2 09:04 start_atlas.sh
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc         0 Feb  2 09:04 boinc_lockfile
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc      2522 Feb  2 09:04 pandaJob.out
[2026-02-02 10:43:57] -rw------- 1 boinc boinc   1008367 Feb  2 09:04 agis_schedconf.cvmfs.json
[2026-02-02 10:43:57] -rw------- 1 boinc boinc   1511668 Feb  2 09:04 agis_ddmendpoints.agis.ALL.json
[2026-02-02 10:43:57] -rw------- 1 boinc boinc       429 Feb  2 09:04 workernode_map.json
[2026-02-02 10:43:57] drwx------ 5 boinc boinc      4096 Feb  2 09:04 pilot3
[2026-02-02 10:43:57] -rw------- 1 boinc boinc 181779887 Feb  2 10:43 HITS.48317892._007943.pool.root.1
[2026-02-02 10:43:57] -rw------- 1 boinc boinc        95 Feb  2 10:43 pilot_heartbeat.json
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc       530 Feb  2 10:43 boinc_task_state.xml
[2026-02-02 10:43:57] -rw------- 1 boinc boinc      1015 Feb  2 10:43 memory_monitor_summary.json
[2026-02-02 10:43:57] -rw------- 1 boinc boinc    294180 Feb  2 10:43 log.48317892._007943.job.log.tgz.1
[2026-02-02 10:43:57] -rw------- 1 boinc boinc      6312 Feb  2 10:43 heartbeat.json
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc      8192 Feb  2 10:43 boinc_mmap_file
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc        27 Feb  2 10:43 wrapper_checkpoint.txt
[2026-02-02 10:43:57] -rw------- 1 boinc boinc       747 Feb  2 10:43 pilotlog.txt
[2026-02-02 10:43:57] -rw------- 1 boinc boinc    859474 Feb  2 10:43 log.48317892._007943.job.log.1
[2026-02-02 10:43:57] -rw------- 1 boinc boinc       357 Feb  2 10:43 output.list
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc       620 Feb  2 10:43 runtime_log
[2026-02-02 10:43:57] -rw------- 1 boinc boinc   1167360 Feb  2 10:43 result.tar.gz
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc      8911 Feb  2 10:43 runtime_log.err
[2026-02-02 10:43:57] -rw------- 1 boinc boinc       660 Feb  2 10:43 136NDmjmu68n9Rq4apOajLDm4fhM0noT9bVooX4SDmyxQKDmdwt5Wn.diag
[2026-02-02 10:43:57] -rw-r--r-- 1 boinc boinc     21336 Feb  2 10:43 stderr.txt
[2026-02-02 10:43:57] HITS file was successfully produced:
[2026-02-02 10:43:57] -rw------- 1 boinc boinc 181779887 Feb  2 10:43 shared/HITS.pool.root.1
[2026-02-02 10:43:57]  *** Contents of shared directory: ***
[2026-02-02 10:43:57] total 663932
[2026-02-02 10:43:57] -rw-r--r-- 2 boinc boinc 496293694 Feb  2 09:04 ATLAS.root_0
[2026-02-02 10:43:57] -rw-r--r-- 2 boinc boinc    597762 Feb  2 09:04 input.tar.gz
[2026-02-02 10:43:57] -rw-r--r-- 2 boinc boinc     15845 Feb  2 09:04 start_atlas.sh
[2026-02-02 10:43:57] -rw------- 1 boinc boinc 181779887 Feb  2 10:43 HITS.pool.root.1
[2026-02-02 10:43:57] -rw------- 1 boinc boinc   1167360 Feb  2 10:43 result.tar.gz
10:43:59 (2461099): run_atlas exited; CPU time 16959.916194
10:43:59 (2461099): called boinc_finish(0)

</stderr_txt>
]]>

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