Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:09:51 (31506): wrapper (7.7.26015): starting
21:09:51 (31506): wrapper: running run_atlas (--nthreads 12)
[2026-02-01 21:09:51] Arguments: --nthreads 12
[2026-02-01 21:09:51] Threads: 12
[2026-02-01 21:09:51] Checking for CVMFS
[2026-02-01 21:09:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 21:09:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 21:09:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 21:09:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 21:09:52] 2.11.2.0 3103 174958 105780 155769 1 52 14474760 20275201 1 130560 0 74431934 99.921 9302816 30547 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-01 21:09:52] CVMFS is ok
[2026-02-01 21:09:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 21:09:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 21:09:52] Further information can be found at the LHC@home message board.
[2026-02-01 21:09:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 21:09:52] Checking for apptainer binary...
[2026-02-01 21:09:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 21:09:52] Running /usr/bin/apptainer --version
[2026-02-01 21:09:52] apptainer version 1.3.2-1.el7
[2026-02-01 21:09:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 21:09:53] c-115-41.aglt2.org
[2026-02-01 21:09:53] apptainer works
[2026-02-01 21:09:53] Set ATHENA_PROC_NUMBER=12
[2026-02-01 21:09:53] Set ATHENA_CORE_NUMBER=12
[2026-02-01 21:09:53] Starting ATLAS job with PandaID=6996275505
[2026-02-01 21:09:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 22:10:24]  *** The last 200 lines of the pilot log: ***
[2026-02-01 22:10:24]  guid=c97b197a-426f-4b23-8051-06d2bcbe1518
[2026-02-01 22:10:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-01 22:10:24]  is_altstaged=None
[2026-02-01 22:10:24]  is_tar=False
[2026-02-01 22:10:24]  lfn=log.48310589._010489.job.log.tgz.1
[2026-02-01 22:10:24]  mtime=0
[2026-02-01 22:10:24]  protocol_id=None
[2026-02-01 22:10:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 22:10:24]  replicas=None
[2026-02-01 22:10:24]  scope=mc23_13p6TeV
[2026-02-01 22:10:24]  status=None
[2026-02-01 22:10:24]  status_code=0
[2026-02-01 22:10:24]  storage_token=
[2026-02-01 22:10:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6996275505/log.48310589._010489.job.log.tgz.1
[2026-02-01 22:10:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/4d/log.48310589._010489.job.log.tgz.1
[2026-02-01 22:10:24]  workdir=None
[2026-02-01 22:10:24] ]
[2026-02-01 22:10:24] 2026-02-02 03:09:31,613 | INFO     | transferring file log.48310589._010489.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6996275505/log.48310589._010489.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-01 22:10:24] 2026-02-02 03:09:31,613 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6996275505/log.48310589._010489.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310589._010489.job
[2026-02-01 22:10:24] 2026-02-02 03:09:31,635 | INFO     | adding to output.list: log.48310589._010489.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/4d/log.48310589._010489.job.log.tg
[2026-02-01 22:10:24] 2026-02-02 03:09:31,636 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 22:10:24] 2026-02-02 03:09:31,636 | INFO     | summary of transferred files:
[2026-02-01 22:10:24] 2026-02-02 03:09:31,636 | INFO     |  -- lfn=log.48310589._010489.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 22:10:24] 2026-02-02 03:09:31,636 | INFO     | stage-out finished correctly
[2026-02-01 22:10:24] 2026-02-02 03:09:32,261 | INFO     | time since job start (3560s) is within the limit (349056.0s)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,168 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 22:10:24] 2026-02-02 03:09:33,237 | INFO     | job 6996275505 has state=finished
[2026-02-01 22:10:24] 2026-02-02 03:09:33,237 | INFO     | preparing for final server update for job 6996275505 in state='finished'
[2026-02-01 22:10:24] 2026-02-02 03:09:33,237 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6996275505/jobReport.json
[2026-02-01 22:10:24] 2026-02-02 03:09:33,239 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-01 22:10:24] 2026-02-02 03:09:33,240 | INFO     | this job has now completed (state=finished)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,240 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,240 | INFO     | log transfer has been attempted: DONE
[2026-02-01 22:10:24] 2026-02-02 03:09:33,240 | INFO     | job 6996275505 has finished - writing final server update
[2026-02-01 22:10:24] 2026-02-02 03:09:33,240 | INFO     | total number of processed events: 400 (read)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,242 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996275505/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,242 | INFO     | extracted standard info from prmon json
[2026-02-01 22:10:24] 2026-02-02 03:09:33,242 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 22:10:24] 2026-02-02 03:09:33,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 22:10:24] 2026-02-02 03:09:33,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 22:10:24] 2026-02-02 03:09:33,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 22:10:24] 2026-02-02 03:09:33,244 | INFO     | fitting pss+swap vs Time
[2026-02-01 22:10:24] 2026-02-02 03:09:33,244 | INFO     | sum of square deviations: 41117050.0
[2026-02-01 22:10:24] 2026-02-02 03:09:33,244 | INFO     | sum of deviations: 844051754.0000007
[2026-02-01 22:10:24] 2026-02-02 03:09:33,244 | INFO     | mean x: 1770000066.0
[2026-02-01 22:10:24] 2026-02-02 03:09:33,244 | INFO     | mean y: 2678051.8235294116
[2026-02-01 22:10:24] 2026-02-02 03:09:33,244 | INFO     | intersect: -36331924267.34618
[2026-02-01 22:10:24] 2026-02-02 03:09:33,245 | INFO     | chi2: 0.0012270266764984688
[2026-02-01 22:10:24] 2026-02-02 03:09:33,245 | INFO     | current memory leak: 20.53 B/s (using 51 data points, chi2=0.00)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,245 | INFO     | could have reported an average CPU frequency of 1817 MHz (5 samples)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,245 | INFO     | ..............................
[2026-02-01 22:10:24] 2026-02-02 03:09:33,245 | INFO     | . Timing measurements:
[2026-02-01 22:10:24] 2026-02-02 03:09:33,245 | INFO     | . get job = 0 s
[2026-02-01 22:10:24] 2026-02-02 03:09:33,245 | INFO     | . initial setup = 7 s
[2026-02-01 22:10:24] 2026-02-02 03:09:33,245 | INFO     | . payload setup = 6 s
[2026-02-01 22:10:24] 2026-02-02 03:09:33,246 | INFO     | . stage-in = 0 s
[2026-02-01 22:10:24] 2026-02-02 03:09:33,246 | INFO     | . payload execution = 3536 s
[2026-02-01 22:10:24] 2026-02-02 03:09:33,246 | INFO     | . stage-out = 0 s
[2026-02-01 22:10:24] 2026-02-02 03:09:33,246 | INFO     | . log creation = 0 s
[2026-02-01 22:10:24] 2026-02-02 03:09:33,246 | INFO     | ..............................
[2026-02-01 22:10:24] 2026-02-02 03:09:33,316 | INFO     | 
[2026-02-01 22:10:24] 2026-02-02 03:09:33,316 | INFO     | job summary report
[2026-02-01 22:10:24] 2026-02-02 03:09:33,316 | INFO     | --------------------------------------------------
[2026-02-01 22:10:24] 2026-02-02 03:09:33,316 | INFO     | PanDA job id: 6996275505
[2026-02-01 22:10:24] 2026-02-02 03:09:33,316 | INFO     | task id: 48310589
[2026-02-01 22:10:24] 2026-02-02 03:09:33,317 | INFO     | errors: (none)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,317 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 22:10:24] 2026-02-02 03:09:33,317 | INFO     | pilot state: finished 
[2026-02-01 22:10:24] 2026-02-02 03:09:33,317 | INFO     | transexitcode: 0
[2026-02-01 22:10:24] 2026-02-02 03:09:33,317 | INFO     | exeerrorcode: 0
[2026-02-01 22:10:24] 2026-02-02 03:09:33,317 | INFO     | exeerrordiag: 
[2026-02-01 22:10:24] 2026-02-02 03:09:33,318 | INFO     | exitcode: 0
[2026-02-01 22:10:24] 2026-02-02 03:09:33,318 | INFO     | exitmsg: OK
[2026-02-01 22:10:24] 2026-02-02 03:09:33,318 | INFO     | cpuconsumptiontime: 38365 s
[2026-02-01 22:10:24] 2026-02-02 03:09:33,318 | INFO     | nevents: 400
[2026-02-01 22:10:24] 2026-02-02 03:09:33,318 | INFO     | neventsw: 0
[2026-02-01 22:10:24] 2026-02-02 03:09:33,318 | INFO     | pid: 7430
[2026-02-01 22:10:24] 2026-02-02 03:09:33,318 | INFO     | pgrp: 7430
[2026-02-01 22:10:24] 2026-02-02 03:09:33,318 | INFO     | corecount: 12
[2026-02-01 22:10:24] 2026-02-02 03:09:33,318 | INFO     | event service: False
[2026-02-01 22:10:24] 2026-02-02 03:09:33,319 | INFO     | sizes: {0: 2277847, 1: 2278308, 11: 2278308, 3547: 2303921, 3548: 2312919, 3550: 2313329}
[2026-02-01 22:10:24] 2026-02-02 03:09:33,319 | INFO     | --------------------------------------------------
[2026-02-01 22:10:24] 2026-02-02 03:09:33,319 | INFO     | 
[2026-02-01 22:10:24] 2026-02-02 03:09:33,319 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-01 22:10:24] 2026-02-02 03:09:33,341 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,342 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,342 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,342 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,344 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,345 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 22:10:24] 2026-02-02 03:09:33,345 | INFO     | job 6996275505 has completed (purged errors)
[2026-02-01 22:10:24] 2026-02-02 03:09:33,345 | INFO     | overall cleanup function is called
[2026-02-01 22:10:24] 2026-02-02 03:09:34,354 | INFO     | --- collectZombieJob: --- 10, [7430]
[2026-02-01 22:10:24] 2026-02-02 03:09:34,354 | INFO     | zombie collector waiting for pid 7430
[2026-02-01 22:10:24] 2026-02-02 03:09:34,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 22:10:24] 2026-02-02 03:09:34,355 | INFO     | collected zombie processes
[2026-02-01 22:10:24] 2026-02-02 03:09:34,355 | INFO     | will attempt to kill all subprocesses of pid=7430
[2026-02-01 22:10:24] 2026-02-02 03:09:34,443 | INFO     | process IDs to be killed: [7430] (in reverse order)
[2026-02-01 22:10:24] 2026-02-02 03:09:34,497 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 22:10:24] 2026-02-02 03:09:34,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 22:10:24] 2026-02-02 03:09:34,500 | INFO     | did not find any defunct processes belonging to 7430
[2026-02-01 22:10:24] 2026-02-02 03:09:34,502 | INFO     | did not find any defunct processes belonging to 7430
[2026-02-01 22:10:24] 2026-02-02 03:09:34,502 | INFO     | ready for new job
[2026-02-01 22:10:24] 2026-02-02 03:09:34,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 22:10:24] 2026-02-02 03:09:34,503 | INFO     | **************************************
[2026-02-01 22:10:24] 2026-02-02 03:09:34,504 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 22:10:24] 2026-02-02 03:09:34,504 | INFO     | **************************************
[2026-02-01 22:10:24] 2026-02-02 03:09:34,504 | INFO     | 
[2026-02-01 22:10:24] 2026-02-02 03:09:34,504 | INFO     | architecture information:
[2026-02-01 22:10:24] 2026-02-02 03:09:34,505 | INFO     | executing command: cat /etc/os-release
[2026-02-01 22:10:24] 2026-02-02 03:09:34,519 | INFO     | cat /etc/os-release:
[2026-02-01 22:10:24] NAME="CentOS Linux"
[2026-02-01 22:10:24] VERSION="7 (Core)"
[2026-02-01 22:10:24] ID="centos"
[2026-02-01 22:10:24] ID_LIKE="rhel fedora"
[2026-02-01 22:10:24] VERSION_ID="7"
[2026-02-01 22:10:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 22:10:24] ANSI_COLOR="0;31"
[2026-02-01 22:10:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 22:10:24] HOME_URL="https://www.centos.org/"
[2026-02-01 22:10:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 22:10:24] 
[2026-02-01 22:10:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 22:10:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 22:10:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 22:10:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 22:10:24] 
[2026-02-01 22:10:24] 2026-02-02 03:09:34,520 | INFO     | **************************************
[2026-02-01 22:10:24] 2026-02-02 03:09:35,023 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-01 22:10:24] 2026-02-02 03:09:35,040 | INFO     | sufficient remaining disk space (18036555776 B)
[2026-02-01 22:10:24] 2026-02-02 03:09:35,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 22:10:24] 2026-02-02 03:09:35,041 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 22:10:24] 2026-02-02 03:09:35,041 | INFO     | update_server=False
[2026-02-01 22:10:24] 2026-02-02 03:09:35,041 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 22:10:24] 2026-02-02 03:09:35,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 22:10:24] 2026-02-02 03:09:35,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 22:10:24] 2026-02-02 03:09:35,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 22:10:24] 2026-02-02 03:09:35,425 | INFO     | all payload control threads have been joined
[2026-02-01 22:10:24] 2026-02-02 03:09:35,600 | INFO     | all job control threads have been joined
[2026-02-01 22:10:24] 2026-02-02 03:09:35,902 | INFO     | all data control threads have been joined
[2026-02-01 22:10:24] 2026-02-02 03:09:36,047 | INFO     | [job] retrieve thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:36,048 | INFO     | [job] queue monitor thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:36,205 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:36,431 | INFO     | [payload] control thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:36,580 | INFO     | [payload] validate_post thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:36,605 | INFO     | [job] control thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:36,806 | INFO     | [job] validate thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:36,844 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:36,907 | INFO     | [data] control thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:37,046 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:37,047 | INFO     | [data] copytool_out thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:37,109 | INFO     | [payload] failed_post thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:37,132 | INFO     | [data] copytool_in thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:37,174 | WARNING  | process 7430 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 22:10:24] 2026-02-02 03:09:37,244 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:37,246 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 22:10:24] 2026-02-02 03:09:37,330 | INFO     | number of running child processes to parent process 7430: 1
[2026-02-01 22:10:24] 2026-02-02 03:09:37,331 | INFO     | maximum number of monitored processes: 6
[2026-02-01 22:10:24] 2026-02-02 03:09:37,331 | INFO     | aborting job monitoring since job object (job id=6996275505) has expired
[2026-02-01 22:10:24] 2026-02-02 03:09:37,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 22:10:24] 2026-02-02 03:09:37,331 | INFO     | will abort loop
[2026-02-01 22:10:24] 2026-02-02 03:09:38,336 | INFO     | [job] job monitor thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:09:39,048 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 22:10:24] 2026-02-02 03:10:05,463 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-02-01 22:10:24] 2026-02-02 03:10:05,465 | INFO     | PID=2959 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-01 22:10:24] 2026-02-02 03:10:05,466 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 22:10:24] 2026-02-02 03:10:05,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 22:10:24] 2026-02-02 03:10:05,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 22:10:24] 2026-02-02 03:10:17,912 | INFO     | [monitor] cgroup control has ended
[2026-02-01 22:10:24] 2026-02-02 03:10:18,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140391105083200)>', '<ExcThread(monitor, started 140390510348032)>']
[2026-02-01 22:10:24] 2026-02-02 03:10:19,530 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 22:10:24] 2026-02-02 03:10:19,530 | INFO     | [monitor] control thread has ended
[2026-02-01 22:10:24] 2026-02-02 03:10:24,017 | INFO     | all workflow threads have been joined
[2026-02-01 22:10:24] 2026-02-02 03:10:24,017 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 22:10:24] 2026-02-02 03:10:24,017 | INFO     | traces error code: 0
[2026-02-01 22:10:24] 2026-02-02 03:10:24,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 22:10:24] 2026-02-02 03:10:24,093 [wrapper] ==== pilot stdout END ====
[2026-02-01 22:10:24] 2026-02-02 03:10:24,096 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 22:10:24] 2026-02-02 03:10:24,100 [wrapper] pilotpid: 2959
[2026-02-01 22:10:24] 2026-02-02 03:10:24,104 [wrapper] Pilot exit status: 0
[2026-02-01 22:10:24] 2026-02-02 03:10:24,119 [wrapper] pandaids: 6996275505
[2026-02-01 22:10:24] 2026-02-02 03:10:24,161 [wrapper] cleanup supervisor_pilot 31694 2960
[2026-02-01 22:10:24] 2026-02-02 03:10:24,164 [wrapper] Test setup, not cleaning
[2026-02-01 22:10:24] 2026-02-02 03:10:24,168 [wrapper] apfmon messages muted
[2026-02-01 22:10:24] 2026-02-02 03:10:24,171 [wrapper] ==== wrapper stdout END ====
[2026-02-01 22:10:24] 2026-02-02 03:10:24,175 [wrapper] ==== wrapper stderr END ====
[2026-02-01 22:10:24]  *** Error codes and diagnostics ***
[2026-02-01 22:10:24]     "exeErrorCode": 0,
[2026-02-01 22:10:24]     "exeErrorDiag": "",
[2026-02-01 22:10:24]     "pilotErrorCode": 0,
[2026-02-01 22:10:24]     "pilotErrorDiag": "",
[2026-02-01 22:10:24]  *** Listing of results directory ***
[2026-02-01 22:10:24] total 659756
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas    584422 Feb  1 14:04 pilot3.tar.gz
[2026-02-01 22:10:24] -rwx------ 1 boincer umatlas     36322 Feb  1 14:07 runpilot2-wrapper.sh
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas      5111 Feb  1 14:10 queuedata.json
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas       100 Feb  1 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 22:10:24] -rwxr-xr-x 1 boincer umatlas      7986 Feb  1 21:09 run_atlas
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas       105 Feb  1 21:09 job.xml
[2026-02-01 22:10:24] -rw-r--r-- 2 boincer umatlas 491839448 Feb  1 21:09 EVNT.48310585._000198.pool.root.1
[2026-02-01 22:10:24] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 21:09 start_atlas.sh
[2026-02-01 22:10:24] drwxrwx--x 2 boincer umatlas      4096 Feb  1 21:09 shared
[2026-02-01 22:10:24] -rw-r--r-- 2 boincer umatlas    597767 Feb  1 21:09 input.tar.gz
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas         0 Feb  1 21:09 boinc_lockfile
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas      2530 Feb  1 21:09 pandaJob.out
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas        57 Feb  1 21:09 setup.sh.local
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas   1009765 Feb  1 21:10 agis_schedconf.cvmfs.json
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas   1511668 Feb  1 21:10 agis_ddmendpoints.agis.ALL.json
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas       434 Feb  1 21:10 workernode_map.json
[2026-02-01 22:10:24] drwx------ 5 boincer umatlas      4096 Feb  1 21:10 pilot3
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas      5954 Feb  1 22:00 init_data.xml
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas 177932653 Feb  1 22:09 HITS.48310589._010489.pool.root.1
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas       530 Feb  1 22:09 boinc_task_state.xml
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas      1044 Feb  1 22:09 memory_monitor_summary.json
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas    407524 Feb  1 22:09 log.48310589._010489.job.log.tgz.1
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas      6400 Feb  1 22:09 heartbeat.json
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas        95 Feb  1 22:10 pilot_heartbeat.json
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas        27 Feb  1 22:10 wrapper_checkpoint.txt
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas      8192 Feb  1 22:10 boinc_mmap_file
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas      5256 Feb  1 22:10 pilotlog.txt
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas    528451 Feb  1 22:10 log.48310589._010489.job.log.1
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas       357 Feb  1 22:10 output.list
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas       620 Feb  1 22:10 runtime_log
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas    952320 Feb  1 22:10 result.tar.gz
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas      9343 Feb  1 22:10 runtime_log.err
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas       659 Feb  1 22:10 5E1NDm5xr68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmW7QKDmewZypn.diag
[2026-02-01 22:10:24] -rw-r--r-- 1 boincer umatlas     21352 Feb  1 22:10 stderr.txt
[2026-02-01 22:10:24] HITS file was successfully produced:
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas 177932653 Feb  1 22:09 shared/HITS.pool.root.1
[2026-02-01 22:10:24]  *** Contents of shared directory: ***
[2026-02-01 22:10:24] total 655616
[2026-02-01 22:10:24] -rw-r--r-- 2 boincer umatlas 491839448 Feb  1 21:09 ATLAS.root_0
[2026-02-01 22:10:24] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 21:09 start_atlas.sh
[2026-02-01 22:10:24] -rw-r--r-- 2 boincer umatlas    597767 Feb  1 21:09 input.tar.gz
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas 177932653 Feb  1 22:09 HITS.pool.root.1
[2026-02-01 22:10:24] -rw------- 1 boincer umatlas    952320 Feb  1 22:10 result.tar.gz
22:10:25 (31506): run_atlas exited; CPU time 38334.865279
22:10:25 (31506): called boinc_finish(0)

</stderr_txt>
]]>

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