Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:02:53 (3476283): wrapper (7.7.26015): starting
12:02:53 (3476283): wrapper: running run_atlas (--nthreads 3)
[2026-02-02 12:02:53] Arguments: --nthreads 3
[2026-02-02 12:02:53] Threads: 3
[2026-02-02 12:02:53] Checking for CVMFS
[2026-02-02 12:02:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 12:02:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 12:02:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 12:02:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 12:02:53] 2.9.2.0 2379912 7105 89176 155783 3 50 24953089 36864001 0 130560 0 3124648 99.987 222864 14818 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 12:02:53] CVMFS is ok
[2026-02-02 12:02:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 12:02:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 12:02:53] Further information can be found at the LHC@home message board.
[2026-02-02 12:02:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 12:02:53] Checking for apptainer binary...
[2026-02-02 12:02:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 12:02:53] Running /usr/bin/apptainer --version
[2026-02-02 12:02:53] apptainer version 1.4.1-1.1
[2026-02-02 12:02:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 12:02:53] atlasA228b
[2026-02-02 12:02:53] apptainer works
[2026-02-02 12:02:53] Set ATHENA_PROC_NUMBER=3
[2026-02-02 12:02:53] Set ATHENA_CORE_NUMBER=3
[2026-02-02 12:02:53] Starting ATLAS job with PandaID=6996275994
[2026-02-02 12:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 13:18:44]  *** The last 200 lines of the pilot log: ***
[2026-02-02 13:18:44] 2026-02-02 12:18:12,707 | INFO     | did not find any defunct processes belonging to 3484768
[2026-02-02 13:18:44] 2026-02-02 12:18:12,707 | INFO     | ready for new job
[2026-02-02 13:18:44] 2026-02-02 12:18:12,707 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 13:18:44] 2026-02-02 12:18:12,708 | INFO     | **************************************
[2026-02-02 13:18:44] 2026-02-02 12:18:12,708 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 13:18:44] 2026-02-02 12:18:12,708 | INFO     | **************************************
[2026-02-02 13:18:44] 2026-02-02 12:18:12,708 | INFO     | 
[2026-02-02 13:18:44] 2026-02-02 12:18:12,708 | INFO     | architecture information:
[2026-02-02 13:18:44] 2026-02-02 12:18:12,709 | INFO     | executing command: cat /etc/os-release
[2026-02-02 13:18:44] 2026-02-02 12:18:12,718 | INFO     | cat /etc/os-release:
[2026-02-02 13:18:44] NAME="CentOS Linux"
[2026-02-02 13:18:44] VERSION="7 (Core)"
[2026-02-02 13:18:44] ID="centos"
[2026-02-02 13:18:44] ID_LIKE="rhel fedora"
[2026-02-02 13:18:44] VERSION_ID="7"
[2026-02-02 13:18:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 13:18:44] ANSI_COLOR="0;31"
[2026-02-02 13:18:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 13:18:44] HOME_URL="https://www.centos.org/"
[2026-02-02 13:18:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 13:18:44] 
[2026-02-02 13:18:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 13:18:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 13:18:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 13:18:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 13:18:44] 
[2026-02-02 13:18:44] 2026-02-02 12:18:12,718 | INFO     | **************************************
[2026-02-02 13:18:44] 2026-02-02 12:18:13,221 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-02 13:18:44] 2026-02-02 12:18:13,235 | INFO     | sufficient remaining disk space (276574502912 B)
[2026-02-02 13:18:44] 2026-02-02 12:18:13,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 13:18:44] 2026-02-02 12:18:13,235 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 13:18:44] 2026-02-02 12:18:13,235 | INFO     | update_server=False
[2026-02-02 13:18:44] 2026-02-02 12:18:13,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 13:18:44] 2026-02-02 12:18:13,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 13:18:44] 2026-02-02 12:18:13,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:18:44] 2026-02-02 12:18:13,278 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:18:44] 2026-02-02 12:18:13,279 | INFO     | aborting loop
[2026-02-02 13:18:44] 2026-02-02 12:18:13,501 | INFO     | all job control threads have been joined
[2026-02-02 13:18:44] 2026-02-02 12:18:13,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 13:18:44] 2026-02-02 12:18:13,967 | INFO     | all payload control threads have been joined
[2026-02-02 13:18:44] 2026-02-02 12:18:14,241 | INFO     | [job] retrieve thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:14,241 | INFO     | [job] queue monitor thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:14,284 | INFO     | [job] job monitor thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:14,293 | INFO     | all data control threads have been joined
[2026-02-02 13:18:44] 2026-02-02 12:18:14,384 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:14,507 | INFO     | [job] control thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:14,729 | INFO     | [payload] validate_post thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:14,932 | INFO     | [job] validate thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:14,971 | INFO     | [payload] control thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:14,987 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:14,991 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:15,135 | INFO     | [data] copytool_in thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:15,221 | INFO     | [payload] failed_post thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:15,299 | INFO     | [data] control thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:15,700 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-02-02 13:18:44] 2026-02-02 12:18:15,708 | INFO     | [data] copytool_out thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:17,242 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:23,991 | INFO     | job.realtimelogging is not enabled
[2026-02-02 13:18:44] 2026-02-02 12:18:24,124 | INFO     | [monitor] cgroup control has ended
[2026-02-02 13:18:44] 2026-02-02 12:18:24,996 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 13:18:44] 2026-02-02 12:18:25,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137573033792)>', '<ExcThread(monitor, started 140136847234816)>']
[2026-02-02 13:18:44] 2026-02-02 12:18:30,256 | INFO     | all workflow threads have been joined
[2026-02-02 13:18:44] 2026-02-02 12:18:30,256 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 13:18:44] 2026-02-02 12:18:30,257 | INFO     | traces error code: 0
[2026-02-02 13:18:44] 2026-02-02 12:18:30,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 13:18:44] 2026-02-02 12:18:44,242 | INFO     | PID=3480343 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 13:18:44] 2026-02-02 12:18:44,242 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 13:18:44] 2026-02-02 12:18:44,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 13:18:44] 2026-02-02 12:18:44,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 13:18:44] 2026-02-02 12:18:44,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 13:18:44] 2026-02-02 12:18:44,242 | INFO     | [monitor] control thread has ended
[2026-02-02 13:18:44] 2026-02-02 12:18:44,292 [wrapper] ==== pilot stdout END ====
[2026-02-02 13:18:44] 2026-02-02 12:18:44,294 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 13:18:44] 2026-02-02 12:18:44,297 [wrapper] pilotpid: 3480343
[2026-02-02 13:18:44] 2026-02-02 12:18:44,299 [wrapper] Pilot exit status: 0
[2026-02-02 13:18:44] 2026-02-02 12:18:44,307 [wrapper] pandaids: 6996275994
[2026-02-02 13:18:44] 2026-02-02 12:18:44,324 [wrapper] cleanup supervisor_pilot 3490415 3480344
[2026-02-02 13:18:44] 2026-02-02 12:18:44,326 [wrapper] Test setup, not cleaning
[2026-02-02 13:18:44] 2026-02-02 12:18:44,329 [wrapper] apfmon messages muted
[2026-02-02 13:18:44] 2026-02-02 12:18:44,331 [wrapper] ==== wrapper stdout END ====
[2026-02-02 13:18:44] 2026-02-02 12:18:44,334 [wrapper] ==== wrapper stderr END ====
[2026-02-02 13:18:44]  *** Error codes and diagnostics ***
[2026-02-02 13:18:44]     "exeErrorCode": 0,
[2026-02-02 13:18:44]     "exeErrorDiag": "",
[2026-02-02 13:18:44]     "pilotErrorCode": 0,
[2026-02-02 13:18:44]     "pilotErrorDiag": "",
[2026-02-02 13:18:44]  *** Listing of results directory ***
[2026-02-02 13:18:44] total 667128
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc    584422 Feb  1 20:04 pilot3.tar.gz
[2026-02-02 13:18:44] -rwx------ 1 boinc boinc     36322 Feb  1 20:05 runpilot2-wrapper.sh
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc      5111 Feb  1 20:06 queuedata.json
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc       100 Feb  2 12:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 13:18:44] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 12:02 run_atlas
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc       105 Feb  2 12:02 job.xml
[2026-02-02 13:18:44] -rw-r--r-- 2 boinc boinc 491255512 Feb  2 12:02 EVNT.48310585._000200.pool.root.1
[2026-02-02 13:18:44] -rw-r--r-- 2 boinc boinc    597763 Feb  2 12:02 input.tar.gz
[2026-02-02 13:18:44] -rw-r--r-- 2 boinc boinc     15845 Feb  2 12:02 start_atlas.sh
[2026-02-02 13:18:44] drwxrwx--x 2 boinc boinc      4096 Feb  2 12:02 shared
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc         0 Feb  2 12:02 boinc_setup_complete
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc      6449 Feb  2 12:02 init_data.xml
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc         0 Feb  2 12:02 boinc_lockfile
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc      2529 Feb  2 12:02 pandaJob.out
[2026-02-02 13:18:44] -rw------- 1 boinc boinc   1008375 Feb  2 12:03 agis_schedconf.cvmfs.json
[2026-02-02 13:18:44] -rw------- 1 boinc boinc   1511668 Feb  2 12:03 agis_ddmendpoints.agis.ALL.json
[2026-02-02 13:18:44] -rw------- 1 boinc boinc       426 Feb  2 12:03 workernode_map.json
[2026-02-02 13:18:44] drwx------ 5 boinc boinc      4096 Feb  2 12:03 pilot3
[2026-02-02 13:18:44] -rw------- 1 boinc boinc 186064078 Feb  2 13:17 HITS.48310589._010591.pool.root.1
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc       530 Feb  2 13:18 boinc_task_state.xml
[2026-02-02 13:18:44] -rw------- 1 boinc boinc      1012 Feb  2 13:18 memory_monitor_summary.json
[2026-02-02 13:18:44] -rw------- 1 boinc boinc    286197 Feb  2 13:18 log.48310589._010591.job.log.tgz.1
[2026-02-02 13:18:44] -rw------- 1 boinc boinc      6304 Feb  2 13:18 heartbeat.json
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc      8192 Feb  2 13:18 boinc_mmap_file
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc        27 Feb  2 13:18 wrapper_checkpoint.txt
[2026-02-02 13:18:44] -rw------- 1 boinc boinc       747 Feb  2 13:18 pilotlog.txt
[2026-02-02 13:18:44] -rw------- 1 boinc boinc        95 Feb  2 13:18 pilot_heartbeat.json
[2026-02-02 13:18:44] -rw------- 1 boinc boinc    663945 Feb  2 13:18 log.48310589._010591.job.log.1
[2026-02-02 13:18:44] -rw------- 1 boinc boinc       357 Feb  2 13:18 output.list
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc       620 Feb  2 13:18 runtime_log
[2026-02-02 13:18:44] -rw------- 1 boinc boinc    962560 Feb  2 13:18 result.tar.gz
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc      8916 Feb  2 13:18 runtime_log.err
[2026-02-02 13:18:44] -rw------- 1 boinc boinc       661 Feb  2 13:18 0iCODmAwr68n9Rq4apOajLDm4fhM0noT9bVooX4SDmYgQKDmkxoQpn.diag
[2026-02-02 13:18:44] -rw-r--r-- 1 boinc boinc      9836 Feb  2 13:18 stderr.txt
[2026-02-02 13:18:44] HITS file was successfully produced:
[2026-02-02 13:18:44] -rw------- 1 boinc boinc 186064078 Feb  2 13:17 shared/HITS.pool.root.1
[2026-02-02 13:18:44]  *** Contents of shared directory: ***
[2026-02-02 13:18:44] total 662996
[2026-02-02 13:18:44] -rw-r--r-- 2 boinc boinc 491255512 Feb  2 12:02 ATLAS.root_0
[2026-02-02 13:18:44] -rw-r--r-- 2 boinc boinc    597763 Feb  2 12:02 input.tar.gz
[2026-02-02 13:18:44] -rw-r--r-- 2 boinc boinc     15845 Feb  2 12:02 start_atlas.sh
[2026-02-02 13:18:44] -rw------- 1 boinc boinc 186064078 Feb  2 13:17 HITS.pool.root.1
[2026-02-02 13:18:44] -rw------- 1 boinc boinc    962560 Feb  2 13:18 result.tar.gz
13:18:46 (3476283): run_atlas exited; CPU time 12807.052501
13:18:46 (3476283): called boinc_finish(0)

</stderr_txt>
]]>

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