Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:57:26 (26703): wrapper (7.7.26015): starting
19:57:26 (26703): wrapper: running run_atlas (--nthreads 12)
[2026-02-01 19:57:26] Arguments: --nthreads 12
[2026-02-01 19:57:26] Threads: 12
[2026-02-01 19:57:26] Checking for CVMFS
[2026-02-01 19:57:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 19:57:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 19:57:26] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 19:57:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 19:57:26] 2.11.2.0 3103 174886 101712 155768 1 50 14383982 20275201 1 130560 0 74379975 99.921 9301469 30544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-01 19:57:26] CVMFS is ok
[2026-02-01 19:57:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 19:57:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 19:57:26] Further information can be found at the LHC@home message board.
[2026-02-01 19:57:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 19:57:26] Checking for apptainer binary...
[2026-02-01 19:57:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 19:57:26] Running /usr/bin/apptainer --version
[2026-02-01 19:57:27] apptainer version 1.3.2-1.el7
[2026-02-01 19:57:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 19:57:28] c-115-41.aglt2.org
[2026-02-01 19:57:28] apptainer works
[2026-02-01 19:57:28] Set ATHENA_PROC_NUMBER=12
[2026-02-01 19:57:28] Set ATHENA_CORE_NUMBER=12
[2026-02-01 19:57:28] Starting ATLAS job with PandaID=6996292301
[2026-02-01 19:57:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 21:09:07]  *** The last 200 lines of the pilot log: ***
[2026-02-01 21:09:07]  filetype=log
[2026-02-01 21:09:07]  guid=f2584e17-c3b7-40bc-87d4-838059a0c7e1
[2026-02-01 21:09:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-01 21:09:07]  is_altstaged=None
[2026-02-01 21:09:07]  is_tar=False
[2026-02-01 21:09:07]  lfn=log.48317892._007534.job.log.tgz.1
[2026-02-01 21:09:07]  mtime=0
[2026-02-01 21:09:07]  protocol_id=None
[2026-02-01 21:09:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 21:09:07]  replicas=None
[2026-02-01 21:09:07]  scope=mc23_13p6TeV
[2026-02-01 21:09:07]  status=None
[2026-02-01 21:09:07]  status_code=0
[2026-02-01 21:09:07]  storage_token=
[2026-02-01 21:09:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6996292301/log.48317892._007534.job.log.tgz.1
[2026-02-01 21:09:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/5c/log.48317892._007534.job.log.tgz.1
[2026-02-01 21:09:07]  workdir=None
[2026-02-01 21:09:07] ]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,174 | INFO     | transferring file log.48317892._007534.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6996292301/log.48317892._007534.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-01 21:09:07] 2026-02-02 02:08:34,174 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6996292301/log.48317892._007534.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317892._007534.job
[2026-02-01 21:09:07] 2026-02-02 02:08:34,197 | INFO     | adding to output.list: log.48317892._007534.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/5c/log.48317892._007534.job.log.tg
[2026-02-01 21:09:07] 2026-02-02 02:08:34,198 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 21:09:07] 2026-02-02 02:08:34,198 | INFO     | summary of transferred files:
[2026-02-01 21:09:07] 2026-02-02 02:08:34,198 | INFO     |  -- lfn=log.48317892._007534.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 21:09:07] 2026-02-02 02:08:34,198 | INFO     | stage-out finished correctly
[2026-02-01 21:09:07] 2026-02-02 02:08:34,529 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 21:09:07] 2026-02-02 02:08:34,601 | INFO     | job 6996292301 has state=finished
[2026-02-01 21:09:07] 2026-02-02 02:08:34,602 | INFO     | preparing for final server update for job 6996292301 in state='finished'
[2026-02-01 21:09:07] 2026-02-02 02:08:34,602 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6996292301/jobReport.json
[2026-02-01 21:09:07] 2026-02-02 02:08:34,605 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-01 21:09:07] 2026-02-02 02:08:34,606 | INFO     | this job has now completed (state=finished)
[2026-02-01 21:09:07] 2026-02-02 02:08:34,606 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 21:09:07] 2026-02-02 02:08:34,606 | INFO     | log transfer has been attempted: DONE
[2026-02-01 21:09:07] 2026-02-02 02:08:34,606 | INFO     | job 6996292301 has finished - writing final server update
[2026-02-01 21:09:07] 2026-02-02 02:08:34,606 | INFO     | total number of processed events: 400 (read)
[2026-02-01 21:09:07] 2026-02-02 02:08:34,609 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6996292301/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 21:09:07] 2026-02-02 02:08:34,609 | INFO     | extracted standard info from prmon json
[2026-02-01 21:09:07] 2026-02-02 02:08:34,609 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 21:09:07] 2026-02-02 02:08:34,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 21:09:07] 2026-02-02 02:08:34,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 21:09:07] 2026-02-02 02:08:34,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 21:09:07] 2026-02-02 02:08:34,611 | INFO     | fitting pss+swap vs Time
[2026-02-01 21:09:07] 2026-02-02 02:08:34,611 | INFO     | sum of square deviations: 77515872.0
[2026-02-01 21:09:07] 2026-02-02 02:08:34,611 | INFO     | sum of deviations: -4378974914.0
[2026-02-01 21:09:07] 2026-02-02 02:08:34,611 | INFO     | mean x: 1769996088.0
[2026-02-01 21:09:07] 2026-02-02 02:08:34,611 | INFO     | mean y: 2749204.126984127
[2026-02-01 21:09:07] 2026-02-02 02:08:34,612 | INFO     | intersect: 99992187073.44666
[2026-02-01 21:09:07] 2026-02-02 02:08:34,612 | INFO     | chi2: 0.04807352630938255
[2026-02-01 21:09:07] 2026-02-02 02:08:34,612 | INFO     | current memory leak: -56.49 B/s (using 63 data points, chi2=0.05)
[2026-02-01 21:09:07] 2026-02-02 02:08:34,612 | INFO     | could have reported an average CPU frequency of 1718 MHz (6 samples)
[2026-02-01 21:09:07] 2026-02-02 02:08:34,612 | INFO     | ..............................
[2026-02-01 21:09:07] 2026-02-02 02:08:34,612 | INFO     | . Timing measurements:
[2026-02-01 21:09:07] 2026-02-02 02:08:34,612 | INFO     | . get job = 0 s
[2026-02-01 21:09:07] 2026-02-02 02:08:34,613 | INFO     | . initial setup = 7 s
[2026-02-01 21:09:07] 2026-02-02 02:08:34,613 | INFO     | . payload setup = 6 s
[2026-02-01 21:09:07] 2026-02-02 02:08:34,613 | INFO     | . stage-in = 0 s
[2026-02-01 21:09:07] 2026-02-02 02:08:34,613 | INFO     | . payload execution = 4222 s
[2026-02-01 21:09:07] 2026-02-02 02:08:34,613 | INFO     | . stage-out = 0 s
[2026-02-01 21:09:07] 2026-02-02 02:08:34,613 | INFO     | . log creation = 0 s
[2026-02-01 21:09:07] 2026-02-02 02:08:34,613 | INFO     | ..............................
[2026-02-01 21:09:07] 2026-02-02 02:08:34,682 | INFO     | 
[2026-02-01 21:09:07] 2026-02-02 02:08:34,682 | INFO     | job summary report
[2026-02-01 21:09:07] 2026-02-02 02:08:34,682 | INFO     | --------------------------------------------------
[2026-02-01 21:09:07] 2026-02-02 02:08:34,682 | INFO     | PanDA job id: 6996292301
[2026-02-01 21:09:07] 2026-02-02 02:08:34,683 | INFO     | task id: 48317892
[2026-02-01 21:09:07] 2026-02-02 02:08:34,683 | INFO     | errors: (none)
[2026-02-01 21:09:07] 2026-02-02 02:08:34,683 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 21:09:07] 2026-02-02 02:08:34,683 | INFO     | pilot state: finished 
[2026-02-01 21:09:07] 2026-02-02 02:08:34,683 | INFO     | transexitcode: 0
[2026-02-01 21:09:07] 2026-02-02 02:08:34,683 | INFO     | exeerrorcode: 0
[2026-02-01 21:09:07] 2026-02-02 02:08:34,684 | INFO     | exeerrordiag: 
[2026-02-01 21:09:07] 2026-02-02 02:08:34,684 | INFO     | exitcode: 0
[2026-02-01 21:09:07] 2026-02-02 02:08:34,684 | INFO     | exitmsg: OK
[2026-02-01 21:09:07] 2026-02-02 02:08:34,684 | INFO     | cpuconsumptiontime: 46244 s
[2026-02-01 21:09:07] 2026-02-02 02:08:34,684 | INFO     | nevents: 400
[2026-02-01 21:09:07] 2026-02-02 02:08:34,684 | INFO     | neventsw: 0
[2026-02-01 21:09:07] 2026-02-02 02:08:34,684 | INFO     | pid: 2735
[2026-02-01 21:09:07] 2026-02-02 02:08:34,685 | INFO     | pgrp: 2735
[2026-02-01 21:09:07] 2026-02-02 02:08:34,685 | INFO     | corecount: 12
[2026-02-01 21:09:07] 2026-02-02 02:08:34,685 | INFO     | event service: False
[2026-02-01 21:09:07] 2026-02-02 02:08:34,685 | INFO     | sizes: {0: 2277788, 1: 2278249, 11: 2278249, 4233: 2304142, 4235: 2313334}
[2026-02-01 21:09:07] 2026-02-02 02:08:34,685 | INFO     | --------------------------------------------------
[2026-02-01 21:09:07] 2026-02-02 02:08:34,685 | INFO     | 
[2026-02-01 21:09:07] 2026-02-02 02:08:34,686 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-01 21:09:07] 2026-02-02 02:08:34,710 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,710 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,710 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,710 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,713 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 21:09:07] 2026-02-02 02:08:34,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 21:09:07] 2026-02-02 02:08:34,713 | INFO     | job 6996292301 has completed (purged errors)
[2026-02-01 21:09:07] 2026-02-02 02:08:34,713 | INFO     | overall cleanup function is called
[2026-02-01 21:09:07] 2026-02-02 02:08:35,722 | INFO     | --- collectZombieJob: --- 10, [2735]
[2026-02-01 21:09:07] 2026-02-02 02:08:35,722 | INFO     | zombie collector waiting for pid 2735
[2026-02-01 21:09:07] 2026-02-02 02:08:35,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 21:09:07] 2026-02-02 02:08:35,722 | INFO     | collected zombie processes
[2026-02-01 21:09:07] 2026-02-02 02:08:35,723 | INFO     | will attempt to kill all subprocesses of pid=2735
[2026-02-01 21:09:07] 2026-02-02 02:08:35,811 | INFO     | process IDs to be killed: [2735] (in reverse order)
[2026-02-01 21:09:07] 2026-02-02 02:08:35,867 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 21:09:07] 2026-02-02 02:08:35,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 21:09:07] 2026-02-02 02:08:35,870 | INFO     | did not find any defunct processes belonging to 2735
[2026-02-01 21:09:07] 2026-02-02 02:08:35,873 | INFO     | did not find any defunct processes belonging to 2735
[2026-02-01 21:09:07] 2026-02-02 02:08:35,873 | INFO     | ready for new job
[2026-02-01 21:09:07] 2026-02-02 02:08:35,873 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 21:09:07] 2026-02-02 02:08:35,874 | INFO     | **************************************
[2026-02-01 21:09:07] 2026-02-02 02:08:35,874 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 21:09:07] 2026-02-02 02:08:35,874 | INFO     | **************************************
[2026-02-01 21:09:07] 2026-02-02 02:08:35,874 | INFO     | 
[2026-02-01 21:09:07] 2026-02-02 02:08:35,875 | INFO     | architecture information:
[2026-02-01 21:09:07] 2026-02-02 02:08:35,875 | INFO     | executing command: cat /etc/os-release
[2026-02-01 21:09:07] 2026-02-02 02:08:35,891 | INFO     | cat /etc/os-release:
[2026-02-01 21:09:07] NAME="CentOS Linux"
[2026-02-01 21:09:07] VERSION="7 (Core)"
[2026-02-01 21:09:07] ID="centos"
[2026-02-01 21:09:07] ID_LIKE="rhel fedora"
[2026-02-01 21:09:07] VERSION_ID="7"
[2026-02-01 21:09:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 21:09:07] ANSI_COLOR="0;31"
[2026-02-01 21:09:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 21:09:07] HOME_URL="https://www.centos.org/"
[2026-02-01 21:09:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 21:09:07] 
[2026-02-01 21:09:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 21:09:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 21:09:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 21:09:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 21:09:07] 
[2026-02-01 21:09:07] 2026-02-02 02:08:35,891 | INFO     | **************************************
[2026-02-01 21:09:07] 2026-02-02 02:08:36,394 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-01 21:09:07] 2026-02-02 02:08:36,411 | INFO     | sufficient remaining disk space (18014535680 B)
[2026-02-01 21:09:07] 2026-02-02 02:08:36,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 21:09:07] 2026-02-02 02:08:36,412 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 21:09:07] 2026-02-02 02:08:36,412 | INFO     | update_server=False
[2026-02-01 21:09:07] 2026-02-02 02:08:36,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 21:09:07] 2026-02-02 02:08:36,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 21:09:07] 2026-02-02 02:08:36,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 21:09:07] 2026-02-02 02:08:37,053 | INFO     | all data control threads have been joined
[2026-02-01 21:09:07] 2026-02-02 02:08:37,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 21:09:07] 2026-02-02 02:08:37,340 | INFO     | job.realtimelogging is not enabled
[2026-02-01 21:09:07] 2026-02-02 02:08:37,418 | INFO     | [job] retrieve thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:37,418 | INFO     | [job] queue monitor thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:37,557 | INFO     | all payload control threads have been joined
[2026-02-01 21:09:07] 2026-02-02 02:08:37,583 | INFO     | [data] copytool_in thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:37,683 | INFO     | all job control threads have been joined
[2026-02-01 21:09:07] 2026-02-02 02:08:38,058 | INFO     | [data] control thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,259 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,346 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,563 | INFO     | [payload] control thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,625 | INFO     | [payload] validate_post thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,688 | INFO     | [job] control thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,741 | INFO     | [job] validate thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,850 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,854 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,892 | WARNING  | process 2735 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 21:09:07] 2026-02-02 02:08:38,913 | INFO     | [payload] failed_post thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:38,964 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 21:09:07] 2026-02-02 02:08:39,047 | INFO     | number of running child processes to parent process 2735: 1
[2026-02-01 21:09:07] 2026-02-02 02:08:39,047 | INFO     | maximum number of monitored processes: 6
[2026-02-01 21:09:07] 2026-02-02 02:08:39,047 | INFO     | aborting job monitoring since job object (job id=6996292301) has expired
[2026-02-01 21:09:07] 2026-02-02 02:08:39,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 21:09:07] 2026-02-02 02:08:39,048 | INFO     | will abort loop
[2026-02-01 21:09:07] 2026-02-02 02:08:39,284 | INFO     | [data] copytool_out thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:40,053 | INFO     | [job] job monitor thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:40,419 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 21:09:07] 2026-02-02 02:08:54,835 | INFO     | [monitor] cgroup control has ended
[2026-02-01 21:09:07] 2026-02-02 02:08:55,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864691877696)>', '<ExcThread(monitor, started 139863504439040)>']
[2026-02-01 21:09:07] 2026-02-02 02:09:00,899 | INFO     | all workflow threads have been joined
[2026-02-01 21:09:07] 2026-02-02 02:09:00,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 21:09:07] 2026-02-02 02:09:00,899 | INFO     | traces error code: 0
[2026-02-01 21:09:07] 2026-02-02 02:09:00,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 21:09:07] 2026-02-02 02:09:06,923 | INFO     | PID=30668 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-01 21:09:07] 2026-02-02 02:09:06,924 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 21:09:07] 2026-02-02 02:09:06,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 21:09:07] 2026-02-02 02:09:06,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 21:09:07] 2026-02-02 02:09:06,924 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 21:09:07] 2026-02-02 02:09:06,924 | INFO     | [monitor] control thread has ended
[2026-02-01 21:09:07] 2026-02-02 02:09:07,014 [wrapper] ==== pilot stdout END ====
[2026-02-01 21:09:07] 2026-02-02 02:09:07,018 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 21:09:07] 2026-02-02 02:09:07,022 [wrapper] pilotpid: 30668
[2026-02-01 21:09:07] 2026-02-02 02:09:07,025 [wrapper] Pilot exit status: 0
[2026-02-01 21:09:07] 2026-02-02 02:09:07,042 [wrapper] pandaids: 6996292301
[2026-02-01 21:09:07] 2026-02-02 02:09:07,080 [wrapper] cleanup supervisor_pilot 26989 30669
[2026-02-01 21:09:07] 2026-02-02 02:09:07,084 [wrapper] Test setup, not cleaning
[2026-02-01 21:09:07] 2026-02-02 02:09:07,088 [wrapper] apfmon messages muted
[2026-02-01 21:09:07] 2026-02-02 02:09:07,093 [wrapper] ==== wrapper stdout END ====
[2026-02-01 21:09:07] 2026-02-02 02:09:07,096 [wrapper] ==== wrapper stderr END ====
[2026-02-01 21:09:07]  *** Error codes and diagnostics ***
[2026-02-01 21:09:07]     "exeErrorCode": 0,
[2026-02-01 21:09:07]     "exeErrorDiag": "",
[2026-02-01 21:09:07]     "pilotErrorCode": 0,
[2026-02-01 21:09:07]     "pilotErrorDiag": "",
[2026-02-01 21:09:07]  *** Listing of results directory ***
[2026-02-01 21:09:07] total 676800
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas    584422 Feb  1 14:04 pilot3.tar.gz
[2026-02-01 21:09:07] -rwx------ 1 boincer umatlas     36322 Feb  1 14:05 runpilot2-wrapper.sh
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas      5111 Feb  1 14:07 queuedata.json
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas       100 Feb  1 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 21:09:07] -rwxr-xr-x 1 boincer umatlas      7986 Feb  1 19:57 run_atlas
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas       105 Feb  1 19:57 job.xml
[2026-02-01 21:09:07] -rw-r--r-- 2 boincer umatlas 495756820 Feb  1 19:57 EVNT.48317889._000144.pool.root.1
[2026-02-01 21:09:07] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 19:57 start_atlas.sh
[2026-02-01 21:09:07] drwxrwx--x 2 boincer umatlas      4096 Feb  1 19:57 shared
[2026-02-01 21:09:07] -rw-r--r-- 2 boincer umatlas    597762 Feb  1 19:57 input.tar.gz
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas         0 Feb  1 19:57 boinc_lockfile
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas      2521 Feb  1 19:57 pandaJob.out
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas        57 Feb  1 19:57 setup.sh.local
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas   1009765 Feb  1 19:57 agis_schedconf.cvmfs.json
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas   1511668 Feb  1 19:57 agis_ddmendpoints.agis.ALL.json
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas       433 Feb  1 19:57 workernode_map.json
[2026-02-01 21:09:07] drwx------ 5 boincer umatlas      4096 Feb  1 19:57 pilot3
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas      5954 Feb  1 21:02 init_data.xml
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas 191309350 Feb  1 21:08 HITS.48317892._007534.pool.root.1
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas       530 Feb  1 21:08 boinc_task_state.xml
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas      1045 Feb  1 21:08 memory_monitor_summary.json
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas    396371 Feb  1 21:08 log.48317892._007534.job.log.tgz.1
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas      6409 Feb  1 21:08 heartbeat.json
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas      8192 Feb  1 21:08 boinc_mmap_file
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas        27 Feb  1 21:08 wrapper_checkpoint.txt
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas       745 Feb  1 21:09 pilotlog.txt
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas        95 Feb  1 21:09 pilot_heartbeat.json
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas    620525 Feb  1 21:09 log.48317892._007534.job.log.1
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas       357 Feb  1 21:09 output.list
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas       620 Feb  1 21:09 runtime_log
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas   1034240 Feb  1 21:09 result.tar.gz
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas       659 Feb  1 21:09 UKJNDmewr68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmT5QKDmNnoe7n.diag
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas      9343 Feb  1 21:09 runtime_log.err
[2026-02-01 21:09:07] -rw-r--r-- 1 boincer umatlas     21242 Feb  1 21:09 stderr.txt
[2026-02-01 21:09:07] HITS file was successfully produced:
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas 191309350 Feb  1 21:08 shared/HITS.pool.root.1
[2026-02-01 21:09:07]  *** Contents of shared directory: ***
[2026-02-01 21:09:07] total 672588
[2026-02-01 21:09:07] -rw-r--r-- 2 boincer umatlas 495756820 Feb  1 19:57 ATLAS.root_0
[2026-02-01 21:09:07] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 19:57 start_atlas.sh
[2026-02-01 21:09:07] -rw-r--r-- 2 boincer umatlas    597762 Feb  1 19:57 input.tar.gz
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas 191309350 Feb  1 21:08 HITS.pool.root.1
[2026-02-01 21:09:07] -rw------- 1 boincer umatlas   1034240 Feb  1 21:09 result.tar.gz
21:09:08 (26703): run_atlas exited; CPU time 46220.203124
21:09:08 (26703): called boinc_finish(0)

</stderr_txt>
]]>

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