Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:08:30 (27522): wrapper (7.7.26015): starting
06:08:30 (27522): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 06:08:30] Arguments: --nthreads 8
[2026-02-02 06:08:30] Threads: 8
[2026-02-02 06:08:30] Checking for CVMFS
[2026-02-02 06:08:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 06:08:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 06:08:30] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 06:08:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 06:08:30] 2.11.0.0 4155 162972 73692 155775 1 11 3005895 4096001 1834 130560 4 16070355 99.612 13786098 602 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-02 06:08:30] CVMFS is ok
[2026-02-02 06:08:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 06:08:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 06:08:30] Further information can be found at the LHC@home message board.
[2026-02-02 06:08:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 06:08:30] Checking for apptainer binary...
[2026-02-02 06:08:30] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-02 06:08:30] apptainer is not installed, using version from CVMFS
[2026-02-02 06:08:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 06:08:30] WARNING: Environment variable TMPDIR already has value [/tmp/job_11072628/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node294
[2026-02-02 06:08:30] apptainer works
[2026-02-02 06:08:30] Set ATHENA_PROC_NUMBER=8
[2026-02-02 06:08:30] Set ATHENA_CORE_NUMBER=8
[2026-02-02 06:08:30] Starting ATLAS job with PandaID=6996275345
[2026-02-02 06:08:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11072628/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 06:58:06]  *** The last 200 lines of the pilot log: ***
[2026-02-02 06:58:06]  domain=
[2026-02-02 06:58:06]  filesize=299281
[2026-02-02 06:58:06]  filetype=log
[2026-02-02 06:58:06]  guid=c3136f74-12c8-4e9c-ab7b-66e9d0d6ae03
[2026-02-02 06:58:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 06:58:06]  is_altstaged=None
[2026-02-02 06:58:06]  is_tar=False
[2026-02-02 06:58:06]  lfn=log.48317872._017987.job.log.tgz.1
[2026-02-02 06:58:06]  mtime=0
[2026-02-02 06:58:06]  protocol_id=None
[2026-02-02 06:58:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 06:58:06]  replicas=None
[2026-02-02 06:58:06]  scope=mc23_13p6TeV
[2026-02-02 06:58:06]  status=None
[2026-02-02 06:58:06]  status_code=0
[2026-02-02 06:58:06]  storage_token=
[2026-02-02 06:58:06]  surl=/tmp/job_11072628/atlas/pilot/slots/0/PanDA_Pilot-6996275345/log.48317872._017987.job.log.tgz.1
[2026-02-02 06:58:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/b1/log.48317872._017987.job.log.tgz.1
[2026-02-02 06:58:06]  workdir=None
[2026-02-02 06:58:06] ]
[2026-02-02 06:58:06] 2026-02-02 05:57:32,662 | INFO     | transferring file log.48317872._017987.job.log.tgz.1 from /tmp/job_11072628/atlas/pilot/slots/0/PanDA_Pilot-6996275345/log.48317872._017987.job.log.tgz.1 to /tmp/j
[2026-02-02 06:58:06] 2026-02-02 05:57:32,662 | INFO     | executing command: /usr/bin/env mv /tmp/job_11072628/atlas/pilot/slots/0/PanDA_Pilot-6996275345/log.48317872._017987.job.log.tgz.1 /tmp/job_11072628/atlas/pilot/sl
[2026-02-02 06:58:06] 2026-02-02 05:57:32,671 | INFO     | adding to output.list: log.48317872._017987.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/b1/log.48317872._017987.job.log.tg
[2026-02-02 06:58:06] 2026-02-02 05:57:32,671 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 06:58:06] 2026-02-02 05:57:32,671 | INFO     | summary of transferred files:
[2026-02-02 06:58:06] 2026-02-02 05:57:32,671 | INFO     |  -- lfn=log.48317872._017987.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 06:58:06] 2026-02-02 05:57:32,671 | INFO     | stage-out finished correctly
[2026-02-02 06:58:06] 2026-02-02 05:57:32,766 | INFO     | time since job start (2934s) is within the limit (349056.0s)
[2026-02-02 06:58:06] 2026-02-02 05:57:32,855 | INFO     | monitor loop #225: job 0:6996275345 is in state 'finished'
[2026-02-02 06:58:06] 2026-02-02 05:57:32,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 06:58:06] 2026-02-02 05:57:33,798 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 06:58:06] 2026-02-02 05:57:34,279 | INFO     | job 6996275345 has state=finished
[2026-02-02 06:58:06] 2026-02-02 05:57:34,279 | INFO     | preparing for final server update for job 6996275345 in state='finished'
[2026-02-02 06:58:06] 2026-02-02 05:57:34,279 | INFO     | reading metadata from: /tmp/job_11072628/atlas/pilot/slots/0/PanDA_Pilot-6996275345/jobReport.json
[2026-02-02 06:58:06] 2026-02-02 05:57:34,281 | INFO     | added worker_node to metadata from /tmp/job_11072628/atlas/pilot/slots/0/workernode_map.json
[2026-02-02 06:58:06] 2026-02-02 05:57:34,281 | INFO     | this job has now completed (state=finished)
[2026-02-02 06:58:06] 2026-02-02 05:57:34,281 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 06:58:06] 2026-02-02 05:57:34,281 | INFO     | log transfer has been attempted: DONE
[2026-02-02 06:58:06] 2026-02-02 05:57:34,281 | INFO     | job 6996275345 has finished - writing final server update
[2026-02-02 06:58:06] 2026-02-02 05:57:34,281 | INFO     | total number of processed events: 400 (read)
[2026-02-02 06:58:06] 2026-02-02 05:57:34,298 | INFO     | using path: /tmp/job_11072628/atlas/pilot/slots/0/PanDA_Pilot-6996275345/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 06:58:06] 2026-02-02 05:57:34,299 | INFO     | extracted standard info from prmon json
[2026-02-02 06:58:06] 2026-02-02 05:57:34,299 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 06:58:06] 2026-02-02 05:57:34,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 06:58:06] 2026-02-02 05:57:34,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 06:58:06] 2026-02-02 05:57:34,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | fitting pss+swap vs Time
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | sum of square deviations: 21358540.0
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | sum of deviations: 21120517.999999948
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | mean x: 1770010460.0
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | mean y: 2537777.7317073173
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | intersect: -1747747484.304845
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | chi2: 0.02389155595057476
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | current memory leak: 0.99 B/s (using 41 data points, chi2=0.02)
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | could have reported an average CPU frequency of 2599 MHz (5 samples)
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | ..............................
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | . Timing measurements:
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | . get job = 0 s
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | . initial setup = 3 s
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | . payload setup = 2 s
[2026-02-02 06:58:06] 2026-02-02 05:57:34,300 | INFO     | . stage-in = 0 s
[2026-02-02 06:58:06] 2026-02-02 05:57:34,301 | INFO     | . payload execution = 2916 s
[2026-02-02 06:58:06] 2026-02-02 05:57:34,301 | INFO     | . stage-out = 0 s
[2026-02-02 06:58:06] 2026-02-02 05:57:34,301 | INFO     | . log creation = 0 s
[2026-02-02 06:58:06] 2026-02-02 05:57:34,301 | INFO     | ..............................
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | 
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | job summary report
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | --------------------------------------------------
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | PanDA job id: 6996275345
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | task id: 48317872
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | errors: (none)
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | pilot state: finished 
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | transexitcode: 0
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | exeerrorcode: 0
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | exeerrordiag: 
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | exitcode: 0
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | exitmsg: OK
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | cpuconsumptiontime: 20127 s
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | nevents: 400
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | neventsw: 0
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | pid: 3693
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | pgrp: 3693
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | corecount: 8
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | event service: False
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | sizes: {0: 2278396, 11: 2278396, 2922: 2303914, 2923: 2312942, 2924: 2313224}
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | --------------------------------------------------
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | 
[2026-02-02 06:58:06] 2026-02-02 05:57:34,350 | INFO     | executing command: ls -lF /tmp/job_11072628/atlas/pilot/slots/0
[2026-02-02 06:58:06] 2026-02-02 05:57:34,360 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | job 6996275345 has completed (purged errors)
[2026-02-02 06:58:06] 2026-02-02 05:57:34,361 | INFO     | overall cleanup function is called
[2026-02-02 06:58:06] 2026-02-02 05:57:35,367 | INFO     | --- collectZombieJob: --- 10, [3693]
[2026-02-02 06:58:06] 2026-02-02 05:57:35,367 | INFO     | zombie collector waiting for pid 3693
[2026-02-02 06:58:06] 2026-02-02 05:57:35,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 06:58:06] 2026-02-02 05:57:35,368 | INFO     | collected zombie processes
[2026-02-02 06:58:06] 2026-02-02 05:57:35,368 | INFO     | will attempt to kill all subprocesses of pid=3693
[2026-02-02 06:58:06] 2026-02-02 05:57:35,459 | INFO     | process IDs to be killed: [3693] (in reverse order)
[2026-02-02 06:58:06] 2026-02-02 05:57:35,489 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 06:58:06] 2026-02-02 05:57:35,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 06:58:06] 2026-02-02 05:57:35,493 | INFO     | did not find any defunct processes belonging to 3693
[2026-02-02 06:58:06] 2026-02-02 05:57:35,495 | INFO     | did not find any defunct processes belonging to 3693
[2026-02-02 06:58:06] 2026-02-02 05:57:35,495 | INFO     | ready for new job
[2026-02-02 06:58:06] 2026-02-02 05:57:35,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 06:58:06] 2026-02-02 05:57:35,496 | INFO     | **************************************
[2026-02-02 06:58:06] 2026-02-02 05:57:35,496 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 06:58:06] 2026-02-02 05:57:35,496 | INFO     | **************************************
[2026-02-02 06:58:06] 2026-02-02 05:57:35,496 | INFO     | 
[2026-02-02 06:58:06] 2026-02-02 05:57:35,510 | INFO     | architecture information:
[2026-02-02 06:58:06] 2026-02-02 05:57:35,510 | INFO     | executing command: cat /etc/os-release
[2026-02-02 06:58:06] 2026-02-02 05:57:35,516 | INFO     | cat /etc/os-release:
[2026-02-02 06:58:06] NAME="CentOS Linux"
[2026-02-02 06:58:06] VERSION="7 (Core)"
[2026-02-02 06:58:06] ID="centos"
[2026-02-02 06:58:06] ID_LIKE="rhel fedora"
[2026-02-02 06:58:06] VERSION_ID="7"
[2026-02-02 06:58:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 06:58:06] ANSI_COLOR="0;31"
[2026-02-02 06:58:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 06:58:06] HOME_URL="https://www.centos.org/"
[2026-02-02 06:58:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 06:58:06] 
[2026-02-02 06:58:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 06:58:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 06:58:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 06:58:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 06:58:06] 
[2026-02-02 06:58:06] 2026-02-02 05:57:35,516 | INFO     | **************************************
[2026-02-02 06:58:06] 2026-02-02 05:57:36,019 | INFO     | executing command: df -mP /tmp/job_11072628/atlas/pilot/slots/0
[2026-02-02 06:58:06] 2026-02-02 05:57:36,025 | INFO     | sufficient remaining disk space (225613709312 B)
[2026-02-02 06:58:06] 2026-02-02 05:57:36,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 06:58:06] 2026-02-02 05:57:36,025 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 06:58:06] 2026-02-02 05:57:36,025 | INFO     | update_server=False
[2026-02-02 06:58:06] 2026-02-02 05:57:36,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 06:58:06] 2026-02-02 05:57:36,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 06:58:06] 2026-02-02 05:57:36,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 06:58:06] 2026-02-02 05:57:36,026 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 06:58:06] 2026-02-02 05:57:36,151 | INFO     | all data control threads have been joined
[2026-02-02 06:58:06] 2026-02-02 05:57:36,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 06:58:06] 2026-02-02 05:57:36,363 | INFO     | aborting loop
[2026-02-02 06:58:06] 2026-02-02 05:57:37,031 | INFO     | [job] retrieve thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:37,031 | INFO     | [job] queue monitor thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:37,124 | INFO     | [payload] failed_post thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:37,156 | INFO     | [data] control thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:37,241 | INFO     | all payload control threads have been joined
[2026-02-02 06:58:06] 2026-02-02 05:57:37,329 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:37,369 | INFO     | [job] job monitor thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:37,618 | INFO     | [job] validate thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:37,630 | INFO     | all job control threads have been joined
[2026-02-02 06:58:06] 2026-02-02 05:57:37,671 | INFO     | [payload] validate_post thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:37,716 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:38,031 | INFO     | [data] copytool_out thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:38,175 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:38,183 | INFO     | [data] copytool_in thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:38,246 | INFO     | [payload] control thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:38,635 | INFO     | [job] control thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:40,031 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:42,553 | INFO     | [monitor] cgroup control has ended
[2026-02-02 06:58:06] 2026-02-02 05:57:46,910 | INFO     | job.realtimelogging is not enabled
[2026-02-02 06:58:06] 2026-02-02 05:57:47,915 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 06:58:06] 2026-02-02 05:57:49,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-02-02 06:58:06] 2026-02-02 05:57:54,401 | INFO     | all workflow threads have been joined
[2026-02-02 06:58:06] 2026-02-02 05:57:54,401 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 06:58:06] 2026-02-02 05:57:54,401 | INFO     | traces error code: 0
[2026-02-02 06:58:06] 2026-02-02 05:57:54,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 06:58:06] 2026-02-02 05:58:05,944 | INFO     | PID=31284 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 06:58:06] 2026-02-02 05:58:05,945 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 06:58:06] 2026-02-02 05:58:05,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 06:58:06] 2026-02-02 05:58:05,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 06:58:06] 2026-02-02 05:58:05,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 06:58:06] 2026-02-02 05:58:05,945 | INFO     | [monitor] control thread has ended
[2026-02-02 06:58:06] 2026-02-02 05:58:06,013 [wrapper] ==== pilot stdout END ====
[2026-02-02 06:58:06] 2026-02-02 05:58:06,014 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 06:58:06] 2026-02-02 05:58:06,016 [wrapper] pilotpid: 31284
[2026-02-02 06:58:06] 2026-02-02 05:58:06,017 [wrapper] Pilot exit status: 0
[2026-02-02 06:58:06] 2026-02-02 05:58:06,022 [wrapper] pandaids: 6996275345
[2026-02-02 06:58:06] 2026-02-02 05:58:06,044 [wrapper] cleanup supervisor_pilot 18172 31285
[2026-02-02 06:58:06] 2026-02-02 05:58:06,045 [wrapper] Test setup, not cleaning
[2026-02-02 06:58:06] 2026-02-02 05:58:06,047 [wrapper] apfmon messages muted
[2026-02-02 06:58:06] 2026-02-02 05:58:06,048 [wrapper] ==== wrapper stdout END ====
[2026-02-02 06:58:06] 2026-02-02 05:58:06,049 [wrapper] ==== wrapper stderr END ====
[2026-02-02 06:58:06]  *** Error codes and diagnostics ***
[2026-02-02 06:58:06]     "exeErrorCode": 0,
[2026-02-02 06:58:06]     "exeErrorDiag": "",
[2026-02-02 06:58:06]     "pilotErrorCode": 0,
[2026-02-02 06:58:06]     "pilotErrorDiag": "",
[2026-02-02 06:58:06]  *** Listing of results directory ***
[2026-02-02 06:58:06] total 671932
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user      5111 Feb  1 20:04 queuedata.json
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user    584422 Feb  1 20:04 pilot3.tar.gz
[2026-02-02 06:58:06] -rwx------ 1 mf493845 unix-user     36322 Feb  1 20:04 runpilot2-wrapper.sh
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user       100 Feb  2 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 06:58:06] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb  2 04:00 run_atlas
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user       105 Feb  2 04:00 job.xml
[2026-02-02 06:58:06] -rw-r--r-- 2 mf493845 unix-user 501132639 Feb  2 06:08 EVNT.48317869._000330.pool.root.1
[2026-02-02 06:58:06] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  2 06:08 start_atlas.sh
[2026-02-02 06:58:06] drwxrwx--x 2 mf493845 unix-user       100 Feb  2 06:08 shared
[2026-02-02 06:58:06] -rw-r--r-- 2 mf493845 unix-user    597755 Feb  2 06:08 input.tar.gz
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user      6389 Feb  2 06:08 init_data.xml
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user         0 Feb  2 06:08 boinc_setup_complete
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user      8192 Feb  2 06:08 boinc_mmap_file
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user         0 Feb  2 06:08 boinc_lockfile
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user      2519 Feb  2 06:08 pandaJob.out
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user   1009823 Feb  2 06:08 agis_schedconf.cvmfs.json
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user   1511668 Feb  2 06:08 agis_ddmendpoints.agis.ALL.json
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user       420 Feb  2 06:08 workernode_map.json
[2026-02-02 06:58:06] drwx------ 5 mf493845 unix-user       440 Feb  2 06:08 pilot3
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user        95 Feb  2 06:57 pilot_heartbeat.json
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user 181490131 Feb  2 06:57 HITS.48317872._017987.pool.root.1
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user      1017 Feb  2 06:57 memory_monitor_summary.json
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user    299281 Feb  2 06:57 log.48317872._017987.job.log.tgz.1
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user      6314 Feb  2 06:57 heartbeat.json
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user       745 Feb  2 06:58 pilotlog.txt
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user    465356 Feb  2 06:58 log.48317872._017987.job.log.1
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user       357 Feb  2 06:58 output.list
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user       620 Feb  2 06:58 runtime_log
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user    778240 Feb  2 06:58 result.tar.gz
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user       643 Feb  2 06:58 XWkNDmPvr68n9Rq4apOajLDm4fhM0noT9bVooX4SDmddQKDmGrEwdm.diag
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user      9219 Feb  2 06:58 runtime_log.err
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user     21605 Feb  2 06:58 stderr.txt
[2026-02-02 06:58:06] HITS file was successfully produced:
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user 181490131 Feb  2 06:57 shared/HITS.pool.root.1
[2026-02-02 06:58:06]  *** Contents of shared directory: ***
[2026-02-02 06:58:06] total 667988
[2026-02-02 06:58:06] -rw-r--r-- 2 mf493845 unix-user 501132639 Feb  2 06:08 ATLAS.root_0
[2026-02-02 06:58:06] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  2 06:08 start_atlas.sh
[2026-02-02 06:58:06] -rw-r--r-- 2 mf493845 unix-user    597755 Feb  2 06:08 input.tar.gz
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user 181490131 Feb  2 06:57 HITS.pool.root.1
[2026-02-02 06:58:06] -rw------- 1 mf493845 unix-user    778240 Feb  2 06:58 result.tar.gz
06:58:07 (27522): run_atlas exited; CPU time 20163.439645
06:58:07 (27522): called boinc_finish(0)

</stderr_txt>
]]>

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