Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:41:38 (1469570): wrapper (7.7.26015): starting
14:41:38 (1469570): wrapper: running run_atlas (--nthreads 4)
[2026-02-05 14:41:38] Arguments: --nthreads 4
[2026-02-05 14:41:38] Threads: 4
[2026-02-05 14:41:38] Checking for CVMFS
[2026-02-05 14:41:38] No cvmfs_config command found, will try listing directly
[2026-02-05 14:41:38] CVMFS is ok
[2026-02-05 14:41:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 14:41:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 14:41:38] Further information can be found at the LHC@home message board.
[2026-02-05 14:41:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 14:41:38] Checking for apptainer binary...
[2026-02-05 14:41:38] which: no apptainer in ((null))
[2026-02-05 14:41:38] apptainer is not installed, using version from CVMFS
[2026-02-05 14:41:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 14:41:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot104/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-02-05 14:41:39] apptainer works
[2026-02-05 14:41:39] Set ATHENA_PROC_NUMBER=4
[2026-02-05 14:41:39] Set ATHENA_CORE_NUMBER=4
[2026-02-05 14:41:39] Starting ATLAS job with PandaID=6992459606
[2026-02-05 14:41:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot104/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 20:50:05]  *** The last 200 lines of the pilot log: ***
[2026-02-05 20:50:05] 2026-02-05 19:46:36,401 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-05 20:50:05] 2026-02-05 19:46:36,495 | INFO     | job 6992459606 has state=finished
[2026-02-05 20:50:05] 2026-02-05 19:46:36,495 | INFO     | preparing for final server update for job 6992459606 in state='finished'
[2026-02-05 20:50:05] 2026-02-05 19:46:36,495 | INFO     | reading metadata from: /var/lib/boinc/var/slot104/slots/9/PanDA_Pilot-6992459606/jobReport.json
[2026-02-05 20:50:05] 2026-02-05 19:46:36,497 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot104/slots/9/workernode_map.json
[2026-02-05 20:50:05] 2026-02-05 19:46:36,498 | INFO     | this job has now completed (state=finished)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,498 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,498 | INFO     | log transfer has been attempted: DONE
[2026-02-05 20:50:05] 2026-02-05 19:46:36,498 | INFO     | job 6992459606 has finished - writing final server update
[2026-02-05 20:50:05] 2026-02-05 19:46:36,499 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_964990/.job.ad'
[2026-02-05 20:50:05] 2026-02-05 19:46:36,500 | INFO     | total number of processed events: 400 (read)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,530 | INFO     | using path: /var/lib/boinc/var/slot104/slots/9/PanDA_Pilot-6992459606/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,530 | INFO     | extracted standard info from prmon json
[2026-02-05 20:50:05] 2026-02-05 19:46:36,530 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 20:50:05] 2026-02-05 19:46:36,531 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 20:50:05] 2026-02-05 19:46:36,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 20:50:05] 2026-02-05 19:46:36,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 20:50:05] 2026-02-05 19:46:36,538 | INFO     | fitting pss+swap vs Time
[2026-02-05 20:50:05] 2026-02-05 19:46:36,539 | INFO     | sum of square deviations: 14108384529.09249
[2026-02-05 20:50:05] 2026-02-05 19:46:36,543 | INFO     | sum of deviations: 45412326629.58823
[2026-02-05 20:50:05] 2026-02-05 19:46:36,543 | INFO     | mean x: 1770309877.0504203
[2026-02-05 20:50:05] 2026-02-05 19:46:36,543 | INFO     | mean y: 2355404.0784313725
[2026-02-05 20:50:05] 2026-02-05 19:46:36,543 | INFO     | intersect: -5695950465.486008
[2026-02-05 20:50:05] 2026-02-05 19:46:36,543 | INFO     | chi2: 1.6486113955974775
[2026-02-05 20:50:05] 2026-02-05 19:46:36,544 | INFO     | sum of square deviations: 13523858129.079556
[2026-02-05 20:50:05] 2026-02-05 19:46:36,547 | INFO     | sum of deviations: 44618980795.3238
[2026-02-05 20:50:05] 2026-02-05 19:46:36,548 | INFO     | mean x: 1770309724.5511363
[2026-02-05 20:50:05] 2026-02-05 19:46:36,548 | INFO     | mean y: 2355197.065340909
[2026-02-05 20:50:05] 2026-02-05 19:46:36,548 | INFO     | intersect: -5838390457.584483
[2026-02-05 20:50:05] 2026-02-05 19:46:36,548 | INFO     | chi2: 1.6490166448988315
[2026-02-05 20:50:05] 2026-02-05 19:46:36,548 | INFO     | current chi2=1.6490166448988315 (change=-0.024581250768749317 %)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,548 | INFO     | right removable region: 351
[2026-02-05 20:50:05] 2026-02-05 19:46:36,549 | INFO     | sum of square deviations: 13523847149.079563
[2026-02-05 20:50:05] 2026-02-05 19:46:36,552 | INFO     | sum of deviations: -13111381117.244328
[2026-02-05 20:50:05] 2026-02-05 19:46:36,553 | INFO     | mean x: 1770310029.5511363
[2026-02-05 20:50:05] 2026-02-05 19:46:36,553 | INFO     | mean y: 2370591.4857954546
[2026-02-05 20:50:05] 2026-02-05 19:46:36,553 | INFO     | intersect: 1718687645.1508672
[2026-02-05 20:50:05] 2026-02-05 19:46:36,553 | INFO     | chi2: 0.05732116295217323
[2026-02-05 20:50:05] 2026-02-05 19:46:36,553 | INFO     | current chi2=0.05732116295217323 (change=96.52306400979357 %)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,554 | INFO     | sum of square deviations: 12955682169.06641
[2026-02-05 20:50:05] 2026-02-05 19:46:36,557 | INFO     | sum of deviations: -16776353462.089344
[2026-02-05 20:50:05] 2026-02-05 19:46:36,557 | INFO     | mean x: 1770310182.0518732
[2026-02-05 20:50:05] 2026-02-05 19:46:36,557 | INFO     | mean y: 2371572.060518732
[2026-02-05 20:50:05] 2026-02-05 19:46:36,558 | INFO     | intersect: 2294751777.4463463
[2026-02-05 20:50:05] 2026-02-05 19:46:36,558 | INFO     | chi2: 0.05021299581137093
[2026-02-05 20:50:05] 2026-02-05 19:46:36,558 | INFO     | current chi2=0.05021299581137093 (change=12.400598268972848 %)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,558 | INFO     | left removable region: 20
[2026-02-05 20:50:05] 2026-02-05 19:46:36,559 | INFO     | sum of square deviations: 11244922161.22657
[2026-02-05 20:50:05] 2026-02-05 19:46:36,561 | INFO     | sum of deviations: -5081056593.809669
[2026-02-05 20:50:05] 2026-02-05 19:46:36,562 | INFO     | mean x: 1770310304.0483384
[2026-02-05 20:50:05] 2026-02-05 19:46:36,562 | INFO     | mean y: 2368222.80060423
[2026-02-05 20:50:05] 2026-02-05 19:46:36,562 | INFO     | intersect: 802288997.2182059
[2026-02-05 20:50:05] 2026-02-05 19:46:36,562 | INFO     | chi2: 0.030935066149905543
[2026-02-05 20:50:05] 2026-02-05 19:46:36,562 | INFO     | current memory leak: -0.45 B/s (using 331 data points, chi2=0.03)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | could have reported an average CPU frequency of 1497 MHz (16 samples)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | ..............................
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | . Timing measurements:
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | . get job = 0 s
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | . initial setup = 24 s
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | . payload setup = 26 s
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | . stage-in = 0 s
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | . payload execution = 21790 s
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | . stage-out = 2 s
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | . log creation = 0 s
[2026-02-05 20:50:05] 2026-02-05 19:46:36,563 | INFO     | ..............................
[2026-02-05 20:50:05] 2026-02-05 19:46:36,655 | INFO     | 
[2026-02-05 20:50:05] 2026-02-05 19:46:36,655 | INFO     | job summary report
[2026-02-05 20:50:05] 2026-02-05 19:46:36,655 | INFO     | --------------------------------------------------
[2026-02-05 20:50:05] 2026-02-05 19:46:36,655 | INFO     | PanDA job id: 6992459606
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | task id: 48431113
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | errors: (none)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | pilot state: finished 
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | transexitcode: 0
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | exeerrorcode: 0
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | exeerrordiag: 
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | exitcode: 0
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | exitmsg: OK
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | cpuconsumptiontime: 78259 s
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | nevents: 400
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | neventsw: 0
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | pid: 1491841
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | pgrp: 1491841
[2026-02-05 20:50:05] 2026-02-05 19:46:36,656 | INFO     | corecount: 4
[2026-02-05 20:50:05] 2026-02-05 19:46:36,657 | INFO     | event service: False
[2026-02-05 20:50:05] 2026-02-05 19:46:36,657 | INFO     | sizes: {0: 2282635, 1: 2282719, 2: 2283152, 3: 2283180, 21821: 2316916, 21824: 2325938, 21828: 2326316}
[2026-02-05 20:50:05] 2026-02-05 19:46:36,657 | INFO     | --------------------------------------------------
[2026-02-05 20:50:05] 2026-02-05 19:46:36,657 | INFO     | 
[2026-02-05 20:50:05] 2026-02-05 19:46:36,657 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot104/slots/9
[2026-02-05 20:50:05] 2026-02-05 19:46:36,690 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,690 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,690 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,690 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,691 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,692 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 20:50:05] 2026-02-05 19:46:36,692 | INFO     | job 6992459606 has completed (purged errors)
[2026-02-05 20:50:05] 2026-02-05 19:46:36,692 | INFO     | overall cleanup function is called
[2026-02-05 20:50:05] 2026-02-05 19:46:37,700 | INFO     | --- collectZombieJob: --- 10, [1491841]
[2026-02-05 20:50:05] 2026-02-05 19:46:37,700 | INFO     | zombie collector waiting for pid 1491841
[2026-02-05 20:50:05] 2026-02-05 19:46:37,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 20:50:05] 2026-02-05 19:46:37,701 | INFO     | collected zombie processes
[2026-02-05 20:50:05] 2026-02-05 19:46:37,701 | INFO     | will attempt to kill all subprocesses of pid=1491841
[2026-02-05 20:50:05] 2026-02-05 19:46:38,590 | INFO     | process IDs to be killed: [1491841] (in reverse order)
[2026-02-05 20:50:05] 2026-02-05 19:46:38,935 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 20:50:05] 2026-02-05 19:46:38,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 20:50:05] 2026-02-05 19:46:38,977 | INFO     | did not find any defunct processes belonging to 1491841
[2026-02-05 20:50:05] 2026-02-05 19:46:39,016 | INFO     | did not find any defunct processes belonging to 1491841
[2026-02-05 20:50:05] 2026-02-05 19:46:39,018 | INFO     | ready for new job
[2026-02-05 20:50:05] 2026-02-05 19:46:39,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 20:50:05] 2026-02-05 19:46:39,021 | INFO     | **************************************
[2026-02-05 20:50:05] 2026-02-05 19:46:39,022 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 20:50:05] 2026-02-05 19:46:39,022 | INFO     | **************************************
[2026-02-05 20:50:05] 2026-02-05 19:46:39,022 | INFO     | 
[2026-02-05 20:50:05] 2026-02-05 19:46:39,033 | INFO     | architecture information:
[2026-02-05 20:50:05] 2026-02-05 19:46:39,034 | INFO     | executing command: cat /etc/os-release
[2026-02-05 20:50:05] 2026-02-05 19:46:39,056 | INFO     | cat /etc/os-release:
[2026-02-05 20:50:05] NAME="CentOS Linux"
[2026-02-05 20:50:05] VERSION="7 (Core)"
[2026-02-05 20:50:05] ID="centos"
[2026-02-05 20:50:05] ID_LIKE="rhel fedora"
[2026-02-05 20:50:05] VERSION_ID="7"
[2026-02-05 20:50:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 20:50:05] ANSI_COLOR="0;31"
[2026-02-05 20:50:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 20:50:05] HOME_URL="https://www.centos.org/"
[2026-02-05 20:50:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 20:50:05] 
[2026-02-05 20:50:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 20:50:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 20:50:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 20:50:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 20:50:05] 
[2026-02-05 20:50:05] 2026-02-05 19:46:39,056 | INFO     | **************************************
[2026-02-05 20:50:05] 2026-02-05 19:46:39,558 | INFO     | executing command: df -mP /var/lib/boinc/var/slot104/slots/9
[2026-02-05 20:50:05] 2026-02-05 19:46:39,585 | INFO     | sufficient remaining disk space (162474754048 B)
[2026-02-05 20:50:05] 2026-02-05 19:46:39,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 20:50:05] 2026-02-05 19:46:39,585 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 20:50:05] 2026-02-05 19:46:39,585 | INFO     | update_server=False
[2026-02-05 20:50:05] 2026-02-05 19:46:39,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 20:50:05] 2026-02-05 19:46:39,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 20:50:05] 2026-02-05 19:46:39,586 | INFO     | aborting loop
[2026-02-05 20:50:05] 2026-02-05 19:46:39,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 20:50:05] 2026-02-05 19:46:39,680 | INFO     | all data control threads have been joined
[2026-02-05 20:50:05] 2026-02-05 19:46:39,688 | INFO     | all payload control threads have been joined
[2026-02-05 20:50:05] 2026-02-05 19:46:40,590 | INFO     | [job] retrieve thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:40,591 | INFO     | [job] job monitor thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:40,609 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:40,635 | INFO     | [payload] validate_post thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:40,684 | INFO     | [data] copytool_in thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:40,685 | INFO     | [data] control thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:40,693 | INFO     | [payload] control thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:40,799 | INFO     | [job] validate thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:40,925 | INFO     | all job control threads have been joined
[2026-02-05 20:50:05] 2026-02-05 19:46:41,181 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:41,471 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:41,591 | INFO     | [data] copytool_out thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:41,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 20:50:05] 2026-02-05 19:46:41,930 | INFO     | [job] control thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:41,958 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:42,003 | INFO     | [payload] failed_post thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:42,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 20:50:05] 2026-02-05 19:46:42,673 | INFO     | [job] queue monitor thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:46:46,509 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 20:50:05] 2026-02-05 19:47:10,173 | INFO     | PID=1477938 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-05 20:50:05] 2026-02-05 19:47:10,173 | INFO     | .. there are 10 such processes running
[2026-02-05 20:50:05] 2026-02-05 19:47:10,174 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 20:50:05] 2026-02-05 19:47:10,174 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 20:50:05] 2026-02-05 19:47:10,174 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 20:50:05] 2026-02-05 19:47:22,521 | INFO     | [monitor] cgroup control has ended
[2026-02-05 20:50:05] 2026-02-05 19:47:24,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22752948569920)>', '<ExcThread(monitor, started 22752710113024)>']
[2026-02-05 20:50:05] 2026-02-05 19:47:25,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 20:50:05] 2026-02-05 19:47:25,262 | INFO     | [monitor] control thread has ended
[2026-02-05 20:50:05] 2026-02-05 19:47:29,368 | INFO     | all workflow threads have been joined
[2026-02-05 20:50:05] 2026-02-05 19:47:29,368 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 20:50:05] 2026-02-05 19:47:29,369 | INFO     | traces error code: 0
[2026-02-05 20:50:05] 2026-02-05 19:47:29,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 20:50:05] 2026-02-05 19:47:29,527 [wrapper] ==== pilot stdout END ====
[2026-02-05 20:50:05] 2026-02-05 19:47:29,531 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 20:50:05] 2026-02-05 19:47:29,538 [wrapper] pilotpid: 1477938
[2026-02-05 20:50:05] 2026-02-05 19:47:29,541 [wrapper] Pilot exit status: 0
[2026-02-05 20:50:05] 2026-02-05 19:47:29,604 [wrapper] pandaids: 6992459606
[2026-02-05 20:50:05] 2026-02-05 19:47:29,880 [wrapper] cleanup supervisor_pilot 2220190 1477939
[2026-02-05 20:50:05] 2026-02-05 19:47:29,885 [wrapper] Test setup, not cleaning
[2026-02-05 20:50:05] 2026-02-05 19:47:29,889 [wrapper] apfmon messages muted
[2026-02-05 20:50:05] 2026-02-05 19:47:29,905 [wrapper] ==== wrapper stdout END ====
[2026-02-05 20:50:05] 2026-02-05 19:47:29,912 [wrapper] ==== wrapper stderr END ====
[2026-02-05 20:50:05]  *** Error codes and diagnostics ***
[2026-02-05 20:50:05]     "exeErrorCode": 0,
[2026-02-05 20:50:05]     "exeErrorDiag": "",
[2026-02-05 20:50:05]     "pilotErrorCode": 0,
[2026-02-05 20:50:05]     "pilotErrorDiag": "",
[2026-02-05 20:50:05]  *** Listing of results directory ***
[2026-02-05 20:50:05] total 896256
[2026-02-05 20:50:05] -rwx------. 1 boinc boinc     36322 Feb  1 18:37 runpilot2-wrapper.sh
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc      5111 Feb  1 18:42 queuedata.json
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc    584422 Feb  1 18:42 pilot3.tar.gz
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc       100 Feb  5 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 20:50:05] -rwxr-xr-x. 1 boinc boinc      7986 Feb  5 14:41 run_atlas
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc       105 Feb  5 14:41 job.xml
[2026-02-05 20:50:05] -rw-r--r--. 2 boinc boinc 651144919 Feb  5 14:41 EVNT.48431111._000010.pool.root.1
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc      6693 Feb  5 14:41 init_data.xml
[2026-02-05 20:50:05] -rw-r--r--. 2 boinc boinc    597762 Feb  5 14:41 input.tar.gz
[2026-02-05 20:50:05] -rw-r--r--. 2 boinc boinc     15845 Feb  5 14:41 start_atlas.sh
[2026-02-05 20:50:05] drwxrwx--x. 2 boinc boinc      4096 Feb  5 14:41 shared
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc         0 Feb  5 14:41 boinc_lockfile
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc      2542 Feb  5 14:41 pandaJob.out
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc   1009524 Feb  5 14:42 agis_schedconf.cvmfs.json
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc       444 Feb  5 14:42 workernode_map.json
[2026-02-05 20:50:05] drwx------. 5 boinc boinc      4096 Feb  5 14:42 pilot3
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc 256300320 Feb  5 20:45 HITS.48431113._000462.pool.root.1
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc       529 Feb  5 20:46 boinc_task_state.xml
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc      1028 Feb  5 20:46 memory_monitor_summary.json
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc   1513144 Feb  5 20:46 agis_ddmendpoints.agis.ALL.json
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc    485164 Feb  5 20:46 log.48431113._000462.job.log.tgz.1
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc      6352 Feb  5 20:46 heartbeat.json
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc        95 Feb  5 20:47 pilot_heartbeat.json
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc      4832 Feb  5 20:47 pilotlog.txt
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc   2706012 Feb  5 20:47 log.48431113._000462.job.log.1
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc       357 Feb  5 20:47 output.list
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc       620 Feb  5 20:47 runtime_log
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc   3205120 Feb  5 20:47 result.tar.gz
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc      9222 Feb  5 20:47 runtime_log.err
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc       666 Feb  5 20:47 Rx8NDmdZq68n9Rq4apOajLDm4fhM0noT9bVooX4SDm7YQKDmNfsnam.diag
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc        26 Feb  5 20:49 wrapper_checkpoint.txt
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc      8192 Feb  5 20:50 boinc_mmap_file
[2026-02-05 20:50:05] -rw-r--r--. 1 boinc boinc     21221 Feb  5 20:50 stderr.txt
[2026-02-05 20:50:05] HITS file was successfully produced:
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc 256300320 Feb  5 20:45 shared/HITS.pool.root.1
[2026-02-05 20:50:05]  *** Contents of shared directory: ***
[2026-02-05 20:50:05] total 889920
[2026-02-05 20:50:05] -rw-r--r--. 2 boinc boinc 651144919 Feb  5 14:41 ATLAS.root_0
[2026-02-05 20:50:05] -rw-r--r--. 2 boinc boinc    597762 Feb  5 14:41 input.tar.gz
[2026-02-05 20:50:05] -rw-r--r--. 2 boinc boinc     15845 Feb  5 14:41 start_atlas.sh
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc 256300320 Feb  5 20:45 HITS.pool.root.1
[2026-02-05 20:50:05] -rw-------. 1 boinc boinc   3205120 Feb  5 20:47 result.tar.gz
20:50:07 (1469570): run_atlas exited; CPU time 80630.123503
20:50:07 (1469570): called boinc_finish(0)

</stderr_txt>
]]>

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