Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:52:55 (23972): wrapper (7.7.26015): starting
05:52:55 (23972): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 05:52:55] Arguments: --nthreads 8
[2026-02-02 05:52:55] Threads: 8
[2026-02-02 05:52:55] Checking for CVMFS
[2026-02-02 05:52:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 05:52:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 05:52:56] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 05:52:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 05:52:56] 2.11.0.0 7913 163364 75832 155774 1 188 2685585 4096000 917 130560 3 8194095 99.634 7157502 404 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-02 05:52:56] CVMFS is ok
[2026-02-02 05:52:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 05:52:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 05:52:56] Further information can be found at the LHC@home message board.
[2026-02-02 05:52:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 05:52:56] Checking for apptainer binary...
[2026-02-02 05:52:56] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-02 05:52:56] apptainer is not installed, using version from CVMFS
[2026-02-02 05:52:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 05:52:56] WARNING: Environment variable TMPDIR already has value [/tmp/job_11072583/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node373
[2026-02-02 05:52:56] apptainer works
[2026-02-02 05:52:56] Set ATHENA_PROC_NUMBER=8
[2026-02-02 05:52:56] Set ATHENA_CORE_NUMBER=8
[2026-02-02 05:52:56] Starting ATLAS job with PandaID=6992459553
[2026-02-02 05:52:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11072583/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 07:00:15]  *** The last 200 lines of the pilot log: ***
[2026-02-02 07:00:15]  filetype=log
[2026-02-02 07:00:15]  guid=4add8dd9-1be3-4afb-95ba-8129aa1f7cf0
[2026-02-02 07:00:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 07:00:15]  is_altstaged=None
[2026-02-02 07:00:15]  is_tar=False
[2026-02-02 07:00:15]  lfn=log.48431113._000445.job.log.tgz.1
[2026-02-02 07:00:15]  mtime=0
[2026-02-02 07:00:15]  protocol_id=None
[2026-02-02 07:00:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 07:00:15]  replicas=None
[2026-02-02 07:00:15]  scope=mc23_13p6TeV
[2026-02-02 07:00:15]  status=None
[2026-02-02 07:00:15]  status_code=0
[2026-02-02 07:00:15]  storage_token=
[2026-02-02 07:00:15]  surl=/tmp/job_11072583/atlas/pilot/slots/0/PanDA_Pilot-6992459553/log.48431113._000445.job.log.tgz.1
[2026-02-02 07:00:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/85/log.48431113._000445.job.log.tgz.1
[2026-02-02 07:00:15]  workdir=None
[2026-02-02 07:00:15] ]
[2026-02-02 07:00:15] 2026-02-02 05:59:12,525 | INFO     | transferring file log.48431113._000445.job.log.tgz.1 from /tmp/job_11072583/atlas/pilot/slots/0/PanDA_Pilot-6992459553/log.48431113._000445.job.log.tgz.1 to /tmp/j
[2026-02-02 07:00:15] 2026-02-02 05:59:12,525 | INFO     | executing command: /usr/bin/env mv /tmp/job_11072583/atlas/pilot/slots/0/PanDA_Pilot-6992459553/log.48431113._000445.job.log.tgz.1 /tmp/job_11072583/atlas/pilot/sl
[2026-02-02 07:00:15] 2026-02-02 05:59:12,533 | INFO     | adding to output.list: log.48431113._000445.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/85/log.48431113._000445.job.log.tg
[2026-02-02 07:00:15] 2026-02-02 05:59:12,534 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 07:00:15] 2026-02-02 05:59:12,534 | INFO     | summary of transferred files:
[2026-02-02 07:00:15] 2026-02-02 05:59:12,534 | INFO     |  -- lfn=log.48431113._000445.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 07:00:15] 2026-02-02 05:59:12,534 | INFO     | stage-out finished correctly
[2026-02-02 07:00:15] 2026-02-02 05:59:12,584 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 07:00:15] 2026-02-02 05:59:13,947 | INFO     | job 6992459553 has state=finished
[2026-02-02 07:00:15] 2026-02-02 05:59:13,947 | INFO     | preparing for final server update for job 6992459553 in state='finished'
[2026-02-02 07:00:15] 2026-02-02 05:59:13,947 | INFO     | reading metadata from: /tmp/job_11072583/atlas/pilot/slots/0/PanDA_Pilot-6992459553/jobReport.json
[2026-02-02 07:00:15] 2026-02-02 05:59:13,949 | INFO     | added worker_node to metadata from /tmp/job_11072583/atlas/pilot/slots/0/workernode_map.json
[2026-02-02 07:00:15] 2026-02-02 05:59:13,949 | INFO     | this job has now completed (state=finished)
[2026-02-02 07:00:15] 2026-02-02 05:59:13,949 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 07:00:15] 2026-02-02 05:59:13,949 | INFO     | log transfer has been attempted: DONE
[2026-02-02 07:00:15] 2026-02-02 05:59:13,949 | INFO     | job 6992459553 has finished - writing final server update
[2026-02-02 07:00:15] 2026-02-02 05:59:13,949 | INFO     | total number of processed events: 400 (read)
[2026-02-02 07:00:15] 2026-02-02 05:59:13,966 | INFO     | using path: /tmp/job_11072583/atlas/pilot/slots/0/PanDA_Pilot-6992459553/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 07:00:15] 2026-02-02 05:59:13,966 | INFO     | extracted standard info from prmon json
[2026-02-02 07:00:15] 2026-02-02 05:59:13,966 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 07:00:15] 2026-02-02 05:59:13,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 07:00:15] 2026-02-02 05:59:13,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 07:00:15] 2026-02-02 05:59:13,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 07:00:15] 2026-02-02 05:59:13,967 | INFO     | fitting pss+swap vs Time
[2026-02-02 07:00:15] 2026-02-02 05:59:13,967 | INFO     | sum of square deviations: 60482994.5
[2026-02-02 07:00:15] 2026-02-02 05:59:13,967 | INFO     | sum of deviations: -1109341303.0
[2026-02-02 07:00:15] 2026-02-02 05:59:13,967 | INFO     | mean x: 1770010042.5
[2026-02-02 07:00:15] 2026-02-02 05:59:13,967 | INFO     | mean y: 2639633.9310344825
[2026-02-02 07:00:15] 2026-02-02 05:59:13,967 | INFO     | intersect: 32467058155.240116
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | chi2: 0.021672992844093415
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | current memory leak: -18.34 B/s (using 58 data points, chi2=0.02)
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | could have reported an average CPU frequency of 2483 MHz (6 samples)
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | ..............................
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | . Timing measurements:
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | . get job = 0 s
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | . initial setup = 2 s
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | . payload setup = 2 s
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | . stage-in = 0 s
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | . payload execution = 3951 s
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | . stage-out = 0 s
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | . log creation = 0 s
[2026-02-02 07:00:15] 2026-02-02 05:59:13,968 | INFO     | ..............................
[2026-02-02 07:00:15] 2026-02-02 05:59:14,099 | INFO     | time since job start (3971s) is within the limit (349056.0s)
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | 
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | job summary report
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | --------------------------------------------------
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | PanDA job id: 6992459553
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | task id: 48431113
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | errors: (none)
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | pilot state: finished 
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | transexitcode: 0
[2026-02-02 07:00:15] 2026-02-02 05:59:14,201 | INFO     | exeerrorcode: 0
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | exeerrordiag: 
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | exitcode: 0
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | exitmsg: OK
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | cpuconsumptiontime: 26350 s
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | nevents: 400
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | neventsw: 0
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | pid: 32184
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | pgrp: 32184
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | corecount: 8
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | event service: False
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | sizes: {0: 2278424, 11: 2278424, 3957: 2304428, 3958: 2313511, 3959: 2313649}
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | --------------------------------------------------
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | 
[2026-02-02 07:00:15] 2026-02-02 05:59:14,202 | INFO     | executing command: ls -lF /tmp/job_11072583/atlas/pilot/slots/0
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,213 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 07:00:15] 2026-02-02 05:59:14,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,213 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 07:00:15] 2026-02-02 05:59:14,213 | INFO     | job 6992459553 has completed (purged errors)
[2026-02-02 07:00:15] 2026-02-02 05:59:14,213 | INFO     | overall cleanup function is called
[2026-02-02 07:00:15] 2026-02-02 05:59:15,219 | INFO     | --- collectZombieJob: --- 10, [32184]
[2026-02-02 07:00:15] 2026-02-02 05:59:15,219 | INFO     | zombie collector waiting for pid 32184
[2026-02-02 07:00:15] 2026-02-02 05:59:15,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 07:00:15] 2026-02-02 05:59:15,219 | INFO     | collected zombie processes
[2026-02-02 07:00:15] 2026-02-02 05:59:15,219 | INFO     | will attempt to kill all subprocesses of pid=32184
[2026-02-02 07:00:15] 2026-02-02 05:59:15,305 | INFO     | process IDs to be killed: [32184] (in reverse order)
[2026-02-02 07:00:15] 2026-02-02 05:59:15,336 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 07:00:15] 2026-02-02 05:59:15,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 07:00:15] 2026-02-02 05:59:15,339 | INFO     | did not find any defunct processes belonging to 32184
[2026-02-02 07:00:15] 2026-02-02 05:59:15,342 | INFO     | did not find any defunct processes belonging to 32184
[2026-02-02 07:00:15] 2026-02-02 05:59:15,342 | INFO     | ready for new job
[2026-02-02 07:00:15] 2026-02-02 05:59:15,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 07:00:15] 2026-02-02 05:59:15,343 | INFO     | **************************************
[2026-02-02 07:00:15] 2026-02-02 05:59:15,343 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 07:00:15] 2026-02-02 05:59:15,343 | INFO     | **************************************
[2026-02-02 07:00:15] 2026-02-02 05:59:15,343 | INFO     | 
[2026-02-02 07:00:15] 2026-02-02 05:59:15,356 | INFO     | architecture information:
[2026-02-02 07:00:15] 2026-02-02 05:59:15,356 | INFO     | executing command: cat /etc/os-release
[2026-02-02 07:00:15] 2026-02-02 05:59:15,363 | INFO     | cat /etc/os-release:
[2026-02-02 07:00:15] NAME="CentOS Linux"
[2026-02-02 07:00:15] VERSION="7 (Core)"
[2026-02-02 07:00:15] ID="centos"
[2026-02-02 07:00:15] ID_LIKE="rhel fedora"
[2026-02-02 07:00:15] VERSION_ID="7"
[2026-02-02 07:00:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 07:00:15] ANSI_COLOR="0;31"
[2026-02-02 07:00:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 07:00:15] HOME_URL="https://www.centos.org/"
[2026-02-02 07:00:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 07:00:15] 
[2026-02-02 07:00:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 07:00:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 07:00:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 07:00:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 07:00:15] 
[2026-02-02 07:00:15] 2026-02-02 05:59:15,363 | INFO     | **************************************
[2026-02-02 07:00:15] 2026-02-02 05:59:15,866 | INFO     | executing command: df -mP /tmp/job_11072583/atlas/pilot/slots/0
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | INFO     | sufficient remaining disk space (224704593920 B)
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | INFO     | update_server=False
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 07:00:15] 2026-02-02 05:59:15,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 07:00:15] 2026-02-02 05:59:16,692 | INFO     | all payload control threads have been joined
[2026-02-02 07:00:15] 2026-02-02 05:59:16,878 | INFO     | [job] retrieve thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:16,878 | INFO     | [job] queue monitor thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:16,946 | INFO     | all data control threads have been joined
[2026-02-02 07:00:15] 2026-02-02 05:59:17,036 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,061 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,170 | INFO     | all job control threads have been joined
[2026-02-02 07:00:15] 2026-02-02 05:59:17,234 | INFO     | [job] validate thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,234 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,250 | INFO     | [data] copytool_in thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,264 | WARNING  | process 32184 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 07:00:15] 2026-02-02 05:59:17,334 | INFO     | using path: /tmp/job_11072583/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 07:00:15] 2026-02-02 05:59:17,415 | INFO     | number of running child processes to parent process 32184: 1
[2026-02-02 07:00:15] 2026-02-02 05:59:17,415 | INFO     | maximum number of monitored processes: 6
[2026-02-02 07:00:15] 2026-02-02 05:59:17,415 | INFO     | aborting job monitoring since job object (job id=6992459553) has expired
[2026-02-02 07:00:15] 2026-02-02 05:59:17,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 07:00:15] 2026-02-02 05:59:17,415 | INFO     | will abort loop
[2026-02-02 07:00:15] 2026-02-02 05:59:17,437 | INFO     | [payload] failed_post thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,698 | INFO     | [payload] control thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,860 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,878 | INFO     | [data] copytool_out thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,926 | INFO     | [payload] validate_post thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:17,950 | INFO     | [data] control thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:18,175 | INFO     | [job] control thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:18,421 | INFO     | [job] job monitor thread has finished
[2026-02-02 07:00:15] 2026-02-02 05:59:18,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 07:00:15] 2026-02-02 05:59:22,640 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 07:00:15] 2026-02-02 06:00:08,979 | INFO     | [monitor] cgroup control has ended
[2026-02-02 07:00:15] 2026-02-02 06:00:09,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-02-02 07:00:15] 2026-02-02 06:00:10,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 07:00:15] 2026-02-02 06:00:10,133 | INFO     | [monitor] control thread has ended
[2026-02-02 07:00:15] 2026-02-02 06:00:15,009 | INFO     | all workflow threads have been joined
[2026-02-02 07:00:15] 2026-02-02 06:00:15,009 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 07:00:15] 2026-02-02 06:00:15,010 | INFO     | traces error code: 0
[2026-02-02 07:00:15] 2026-02-02 06:00:15,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 07:00:15] 2026-02-02 06:00:15,062 [wrapper] ==== pilot stdout END ====
[2026-02-02 07:00:15] 2026-02-02 06:00:15,064 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 07:00:15] 2026-02-02 06:00:15,065 [wrapper] pilotpid: 27720
[2026-02-02 07:00:15] 2026-02-02 06:00:15,066 [wrapper] Pilot exit status: 0
[2026-02-02 07:00:15] 2026-02-02 06:00:15,071 [wrapper] pandaids: 6992459553
[2026-02-02 07:00:15] 2026-02-02 06:00:15,093 [wrapper] cleanup supervisor_pilot 16639 27721
[2026-02-02 07:00:15] 2026-02-02 06:00:15,095 [wrapper] Test setup, not cleaning
[2026-02-02 07:00:15] 2026-02-02 06:00:15,096 [wrapper] apfmon messages muted
[2026-02-02 07:00:15] 2026-02-02 06:00:15,097 [wrapper] ==== wrapper stdout END ====
[2026-02-02 07:00:15] 2026-02-02 06:00:15,098 [wrapper] ==== wrapper stderr END ====
[2026-02-02 07:00:15]  *** Error codes and diagnostics ***
[2026-02-02 07:00:15]     "exeErrorCode": 0,
[2026-02-02 07:00:15]     "exeErrorDiag": "",
[2026-02-02 07:00:15]     "pilotErrorCode": 0,
[2026-02-02 07:00:15]     "pilotErrorDiag": "",
[2026-02-02 07:00:15]  *** Listing of results directory ***
[2026-02-02 07:00:15] total 882728
[2026-02-02 07:00:15] -rwx------ 1 mf493845 unix-user     36322 Feb  1 18:37 runpilot2-wrapper.sh
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user      5111 Feb  1 18:42 queuedata.json
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user    584422 Feb  1 18:42 pilot3.tar.gz
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user       100 Feb  2 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 07:00:15] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb  2 03:38 run_atlas
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user       105 Feb  2 03:38 job.xml
[2026-02-02 07:00:15] -rw-r--r-- 2 mf493845 unix-user 647465719 Feb  2 05:52 EVNT.48431111._000009.pool.root.1
[2026-02-02 07:00:15] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  2 05:52 start_atlas.sh
[2026-02-02 07:00:15] drwxrwx--x 2 mf493845 unix-user       100 Feb  2 05:52 shared
[2026-02-02 07:00:15] -rw-r--r-- 2 mf493845 unix-user    597764 Feb  2 05:52 input.tar.gz
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user      6391 Feb  2 05:52 init_data.xml
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user         0 Feb  2 05:52 boinc_setup_complete
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user      8192 Feb  2 05:52 boinc_mmap_file
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user         0 Feb  2 05:52 boinc_lockfile
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user      2543 Feb  2 05:52 pandaJob.out
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user   1009823 Feb  2 05:53 agis_schedconf.cvmfs.json
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user   1511668 Feb  2 05:53 agis_ddmendpoints.agis.ALL.json
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user       420 Feb  2 05:53 workernode_map.json
[2026-02-02 07:00:15] drwx------ 5 mf493845 unix-user       440 Feb  2 05:53 pilot3
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user        95 Feb  2 06:58 pilot_heartbeat.json
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user 250625610 Feb  2 06:58 HITS.48431113._000445.pool.root.1
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user      1014 Feb  2 06:59 memory_monitor_summary.json
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user    351231 Feb  2 06:59 log.48431113._000445.job.log.tgz.1
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user      6312 Feb  2 06:59 heartbeat.json
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user      5094 Feb  2 07:00 pilotlog.txt
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user    604146 Feb  2 07:00 log.48431113._000445.job.log.1
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user       357 Feb  2 07:00 output.list
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user       620 Feb  2 07:00 runtime_log
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user    972800 Feb  2 07:00 result.tar.gz
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user      9219 Feb  2 07:00 runtime_log.err
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user       643 Feb  2 07:00 5YmNDmdZq68n9Rq4apOajLDm4fhM0noT9bVooX4SDmrYQKDmELDt4m.diag
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user     21752 Feb  2 07:00 stderr.txt
[2026-02-02 07:00:15] HITS file was successfully produced:
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user 250625610 Feb  2 06:58 shared/HITS.pool.root.1
[2026-02-02 07:00:15]  *** Contents of shared directory: ***
[2026-02-02 07:00:15] total 878596
[2026-02-02 07:00:15] -rw-r--r-- 2 mf493845 unix-user 647465719 Feb  2 05:52 ATLAS.root_0
[2026-02-02 07:00:15] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  2 05:52 start_atlas.sh
[2026-02-02 07:00:15] -rw-r--r-- 2 mf493845 unix-user    597764 Feb  2 05:52 input.tar.gz
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user 250625610 Feb  2 06:58 HITS.pool.root.1
[2026-02-02 07:00:15] -rw------- 1 mf493845 unix-user    972800 Feb  2 07:00 result.tar.gz
07:00:16 (23972): run_atlas exited; CPU time 26395.298886
07:00:16 (23972): called boinc_finish(0)

</stderr_txt>
]]>

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