Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:01:04 (2193107): wrapper (7.7.26015): starting
01:01:04 (2193107): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 01:01:04] Arguments: --nthreads 12
[2026-02-02 01:01:04] Threads: 12
[2026-02-02 01:01:04] Checking for CVMFS
[2026-02-02 01:01:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 01:01:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 01:01:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 01:01:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 01:01:05] 2.11.0.0 921820 4550 92752 155768 2 188 4199489 6144000 11919 130560 0 45138517 99.999 168684 167 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-02 01:01:05] CVMFS is ok
[2026-02-02 01:01:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 01:01:05] Checking for apptainer binary...
[2026-02-02 01:01:05] apptainer is not installed, using version from CVMFS
[2026-02-02 01:01:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 01:01:05] radiat0r
[2026-02-02 01:01:05] apptainer works
[2026-02-02 01:01:05] Set ATHENA_PROC_NUMBER=12
[2026-02-02 01:01:05] Set ATHENA_CORE_NUMBER=12
[2026-02-02 01:01:05] Starting ATLAS job with PandaID=6992459602
[2026-02-02 01:01:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/29 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 02:13:36]  *** The last 200 lines of the pilot log: ***
[2026-02-02 02:13:36]  filetype=log
[2026-02-02 02:13:36]  guid=d83e73dc-9a4f-4cdb-be22-efd8f629d32e
[2026-02-02 02:13:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 02:13:36]  is_altstaged=None
[2026-02-02 02:13:36]  is_tar=False
[2026-02-02 02:13:36]  lfn=log.48431113._000458.job.log.tgz.1
[2026-02-02 02:13:36]  mtime=0
[2026-02-02 02:13:36]  protocol_id=None
[2026-02-02 02:13:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 02:13:36]  replicas=None
[2026-02-02 02:13:36]  scope=mc23_13p6TeV
[2026-02-02 02:13:36]  status=None
[2026-02-02 02:13:36]  status_code=0
[2026-02-02 02:13:36]  storage_token=
[2026-02-02 02:13:36]  surl=/var/lib/boinc/slots/29/PanDA_Pilot-6992459602/log.48431113._000458.job.log.tgz.1
[2026-02-02 02:13:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/16/log.48431113._000458.job.log.tgz.1
[2026-02-02 02:13:36]  workdir=None
[2026-02-02 02:13:36] ]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,256 | INFO     | transferring file log.48431113._000458.job.log.tgz.1 from /var/lib/boinc/slots/29/PanDA_Pilot-6992459602/log.48431113._000458.job.log.tgz.1 to /var/lib/boinc/slots
[2026-02-02 02:13:36] 2026-02-02 02:12:36,256 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/29/PanDA_Pilot-6992459602/log.48431113._000458.job.log.tgz.1 /var/lib/boinc/slots/29/log.48431113._000458.j
[2026-02-02 02:13:36] 2026-02-02 02:12:36,286 | INFO     | adding to output.list: log.48431113._000458.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/16/log.48431113._000458.job.log.tg
[2026-02-02 02:13:36] 2026-02-02 02:12:36,288 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 02:13:36] 2026-02-02 02:12:36,288 | INFO     | summary of transferred files:
[2026-02-02 02:13:36] 2026-02-02 02:12:36,288 | INFO     |  -- lfn=log.48431113._000458.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 02:13:36] 2026-02-02 02:12:36,288 | INFO     | stage-out finished correctly
[2026-02-02 02:13:36] 2026-02-02 02:12:36,387 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 02:13:36] 2026-02-02 02:12:36,628 | INFO     | job 6992459602 has state=finished
[2026-02-02 02:13:36] 2026-02-02 02:12:36,629 | INFO     | preparing for final server update for job 6992459602 in state='finished'
[2026-02-02 02:13:36] 2026-02-02 02:12:36,629 | INFO     | reading metadata from: /var/lib/boinc/slots/29/PanDA_Pilot-6992459602/jobReport.json
[2026-02-02 02:13:36] 2026-02-02 02:12:36,632 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/29/workernode_map.json
[2026-02-02 02:13:36] 2026-02-02 02:12:36,632 | INFO     | this job has now completed (state=finished)
[2026-02-02 02:13:36] 2026-02-02 02:12:36,632 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 02:13:36] 2026-02-02 02:12:36,632 | INFO     | log transfer has been attempted: DONE
[2026-02-02 02:13:36] 2026-02-02 02:12:36,632 | INFO     | job 6992459602 has finished - writing final server update
[2026-02-02 02:13:36] 2026-02-02 02:12:36,633 | INFO     | total number of processed events: 400 (read)
[2026-02-02 02:13:36] 2026-02-02 02:12:36,704 | INFO     | using path: /var/lib/boinc/slots/29/PanDA_Pilot-6992459602/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 02:13:36] 2026-02-02 02:12:36,704 | INFO     | extracted standard info from prmon json
[2026-02-02 02:13:36] 2026-02-02 02:12:36,704 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 02:13:36] 2026-02-02 02:12:36,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 02:13:36] 2026-02-02 02:12:36,705 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 02:13:36] 2026-02-02 02:12:36,705 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 02:13:36] 2026-02-02 02:12:36,707 | INFO     | fitting pss+swap vs Time
[2026-02-02 02:13:36] 2026-02-02 02:12:36,707 | INFO     | sum of square deviations: 77515872.0
[2026-02-02 02:13:36] 2026-02-02 02:12:36,708 | INFO     | sum of deviations: 1015004803.0
[2026-02-02 02:13:36] 2026-02-02 02:12:36,708 | INFO     | mean x: 1769996306.0
[2026-02-02 02:13:36] 2026-02-02 02:12:36,708 | INFO     | mean y: 2735369.777777778
[2026-02-02 02:13:36] 2026-02-02 02:12:36,708 | INFO     | intersect: -23173869698.694622
[2026-02-02 02:13:36] 2026-02-02 02:12:36,708 | INFO     | chi2: 0.0017342082459221085
[2026-02-02 02:13:36] 2026-02-02 02:12:36,708 | INFO     | current memory leak: 13.09 B/s (using 63 data points, chi2=0.00)
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | could have reported an average CPU frequency of 2416 MHz (6 samples)
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | ..............................
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | . Timing measurements:
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | . get job = 0 s
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | . initial setup = 7 s
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | . payload setup = 7 s
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | . stage-in = 0 s
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | . payload execution = 4247 s
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | . stage-out = 1 s
[2026-02-02 02:13:36] 2026-02-02 02:12:36,709 | INFO     | . log creation = 0 s
[2026-02-02 02:13:36] 2026-02-02 02:12:36,710 | INFO     | ..............................
[2026-02-02 02:13:36] 2026-02-02 02:12:36,805 | INFO     | 
[2026-02-02 02:13:36] 2026-02-02 02:12:36,808 | INFO     | job summary report
[2026-02-02 02:13:36] 2026-02-02 02:12:36,808 | INFO     | --------------------------------------------------
[2026-02-02 02:13:36] 2026-02-02 02:12:36,808 | INFO     | PanDA job id: 6992459602
[2026-02-02 02:13:36] 2026-02-02 02:12:36,808 | INFO     | task id: 48431113
[2026-02-02 02:13:36] 2026-02-02 02:12:36,808 | INFO     | errors: (none)
[2026-02-02 02:13:36] 2026-02-02 02:12:36,808 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 02:13:36] 2026-02-02 02:12:36,808 | INFO     | pilot state: finished 
[2026-02-02 02:13:36] 2026-02-02 02:12:36,808 | INFO     | transexitcode: 0
[2026-02-02 02:13:36] 2026-02-02 02:12:36,808 | INFO     | exeerrorcode: 0
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | exeerrordiag: 
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | exitcode: 0
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | exitmsg: OK
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | cpuconsumptiontime: 46318 s
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | nevents: 400
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | neventsw: 0
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | pid: 2203366
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | pgrp: 2203366
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | corecount: 12
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | event service: False
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | sizes: {0: 2277864, 1: 2278325, 12: 2278325, 4259: 2304605, 4260: 2313799}
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | --------------------------------------------------
[2026-02-02 02:13:36] 2026-02-02 02:12:36,809 | INFO     | 
[2026-02-02 02:13:36] 2026-02-02 02:12:36,810 | INFO     | executing command: ls -lF /var/lib/boinc/slots/29
[2026-02-02 02:13:36] 2026-02-02 02:12:36,843 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,843 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,843 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,843 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,845 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 02:13:36] 2026-02-02 02:12:36,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,845 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 02:13:36] 2026-02-02 02:12:36,845 | INFO     | job 6992459602 has completed (purged errors)
[2026-02-02 02:13:36] 2026-02-02 02:12:36,845 | INFO     | overall cleanup function is called
[2026-02-02 02:13:36] 2026-02-02 02:12:37,852 | INFO     | --- collectZombieJob: --- 10, [2203366]
[2026-02-02 02:13:36] 2026-02-02 02:12:37,852 | INFO     | zombie collector waiting for pid 2203366
[2026-02-02 02:13:36] 2026-02-02 02:12:37,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 02:13:36] 2026-02-02 02:12:37,852 | INFO     | collected zombie processes
[2026-02-02 02:13:36] 2026-02-02 02:12:37,852 | INFO     | will attempt to kill all subprocesses of pid=2203366
[2026-02-02 02:13:36] 2026-02-02 02:12:38,664 | INFO     | process IDs to be killed: [2203366] (in reverse order)
[2026-02-02 02:13:36] 2026-02-02 02:12:38,938 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 02:13:36] 2026-02-02 02:12:38,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 02:13:36] 2026-02-02 02:12:38,971 | INFO     | did not find any defunct processes belonging to 2203366
[2026-02-02 02:13:36] 2026-02-02 02:12:39,003 | INFO     | did not find any defunct processes belonging to 2203366
[2026-02-02 02:13:36] 2026-02-02 02:12:39,004 | INFO     | ready for new job
[2026-02-02 02:13:36] 2026-02-02 02:12:39,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 02:13:36] 2026-02-02 02:12:39,009 | INFO     | **************************************
[2026-02-02 02:13:36] 2026-02-02 02:12:39,009 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 02:13:36] 2026-02-02 02:12:39,010 | INFO     | **************************************
[2026-02-02 02:13:36] 2026-02-02 02:12:39,010 | INFO     | 
[2026-02-02 02:13:36] 2026-02-02 02:12:39,053 | INFO     | architecture information:
[2026-02-02 02:13:36] 2026-02-02 02:12:39,054 | INFO     | executing command: cat /etc/os-release
[2026-02-02 02:13:36] 2026-02-02 02:12:39,085 | INFO     | cat /etc/os-release:
[2026-02-02 02:13:36] NAME="CentOS Linux"
[2026-02-02 02:13:36] VERSION="7 (Core)"
[2026-02-02 02:13:36] ID="centos"
[2026-02-02 02:13:36] ID_LIKE="rhel fedora"
[2026-02-02 02:13:36] VERSION_ID="7"
[2026-02-02 02:13:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 02:13:36] ANSI_COLOR="0;31"
[2026-02-02 02:13:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 02:13:36] HOME_URL="https://www.centos.org/"
[2026-02-02 02:13:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 02:13:36] 
[2026-02-02 02:13:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 02:13:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 02:13:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 02:13:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 02:13:36] 
[2026-02-02 02:13:36] 2026-02-02 02:12:39,085 | INFO     | **************************************
[2026-02-02 02:13:36] 2026-02-02 02:12:39,589 | INFO     | executing command: df -mP /var/lib/boinc/slots/29
[2026-02-02 02:13:36] 2026-02-02 02:12:39,620 | INFO     | sufficient remaining disk space (1698826289152 B)
[2026-02-02 02:13:36] 2026-02-02 02:12:39,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 02:13:36] 2026-02-02 02:12:39,620 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 02:13:36] 2026-02-02 02:12:39,621 | INFO     | update_server=False
[2026-02-02 02:13:36] 2026-02-02 02:12:39,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 02:13:36] 2026-02-02 02:12:39,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 02:13:36] 2026-02-02 02:12:40,626 | INFO     | [job] retrieve thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:40,670 | INFO     | all job control threads have been joined
[2026-02-02 02:13:36] 2026-02-02 02:12:40,691 | INFO     | all data control threads have been joined
[2026-02-02 02:13:36] 2026-02-02 02:12:40,816 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:40,884 | INFO     | all payload control threads have been joined
[2026-02-02 02:13:36] 2026-02-02 02:12:40,986 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:41,064 | WARNING  | process 2203366 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 02:13:36] 2026-02-02 02:12:41,092 | INFO     | [payload] validate_post thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:41,357 | INFO     | [data] copytool_in thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:41,627 | INFO     | [data] copytool_out thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:41,643 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:41,676 | INFO     | [job] control thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:41,696 | INFO     | [data] control thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:41,716 | INFO     | using path: /var/lib/boinc/slots/29/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 02:13:36] 2026-02-02 02:12:41,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 02:13:36] 2026-02-02 02:12:41,890 | INFO     | [payload] control thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:41,891 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:42,079 | INFO     | [job] validate thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:42,160 | INFO     | [payload] failed_post thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:42,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 02:13:36] 2026-02-02 02:12:42,530 | INFO     | number of running child processes to parent process 2203366: 1
[2026-02-02 02:13:36] 2026-02-02 02:12:42,530 | INFO     | maximum number of monitored processes: 6
[2026-02-02 02:13:36] 2026-02-02 02:12:42,530 | INFO     | aborting job monitoring since job object (job id=6992459602) has expired
[2026-02-02 02:13:36] 2026-02-02 02:12:42,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 02:13:36] 2026-02-02 02:12:42,530 | INFO     | will abort loop
[2026-02-02 02:13:36] 2026-02-02 02:12:42,816 | INFO     | [job] queue monitor thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:43,536 | INFO     | [job] job monitor thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:12:46,492 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 02:13:36] 2026-02-02 02:13:09,704 | INFO     | PID=2197812 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-02 02:13:36] 2026-02-02 02:13:09,704 | INFO     | .. there are 14 such processes running
[2026-02-02 02:13:36] 2026-02-02 02:13:09,704 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 02:13:36] 2026-02-02 02:13:09,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 02:13:36] 2026-02-02 02:13:09,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 02:13:36] 2026-02-02 02:13:30,876 | INFO     | [monitor] cgroup control has ended
[2026-02-02 02:13:36] 2026-02-02 02:13:31,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508188342080)>', '<ExcThread(monitor, started 140507741140736)>']
[2026-02-02 02:13:36] 2026-02-02 02:13:31,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 02:13:36] 2026-02-02 02:13:31,790 | INFO     | [monitor] control thread has ended
[2026-02-02 02:13:36] 2026-02-02 02:13:36,308 | INFO     | all workflow threads have been joined
[2026-02-02 02:13:36] 2026-02-02 02:13:36,308 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 02:13:36] 2026-02-02 02:13:36,308 | INFO     | traces error code: 0
[2026-02-02 02:13:36] 2026-02-02 02:13:36,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 02:13:36] 2026-02-02 02:13:36,487 [wrapper] ==== pilot stdout END ====
[2026-02-02 02:13:36] 2026-02-02 02:13:36,490 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 02:13:36] 2026-02-02 02:13:36,493 [wrapper] pilotpid: 2197812
[2026-02-02 02:13:36] 2026-02-02 02:13:36,498 [wrapper] Pilot exit status: 0
[2026-02-02 02:13:36] 2026-02-02 02:13:36,511 [wrapper] pandaids: 6992459602
[2026-02-02 02:13:36] 2026-02-02 02:13:36,684 [wrapper] cleanup supervisor_pilot 2434944 2197813
[2026-02-02 02:13:36] 2026-02-02 02:13:36,691 [wrapper] Test setup, not cleaning
[2026-02-02 02:13:36] 2026-02-02 02:13:36,695 [wrapper] apfmon messages muted
[2026-02-02 02:13:36] 2026-02-02 02:13:36,698 [wrapper] ==== wrapper stdout END ====
[2026-02-02 02:13:36] 2026-02-02 02:13:36,702 [wrapper] ==== wrapper stderr END ====
[2026-02-02 02:13:36]  *** Error codes and diagnostics ***
[2026-02-02 02:13:36]     "exeErrorCode": 0,
[2026-02-02 02:13:36]     "exeErrorDiag": "",
[2026-02-02 02:13:36]     "pilotErrorCode": 0,
[2026-02-02 02:13:36]     "pilotErrorDiag": "",
[2026-02-02 02:13:36]  *** Listing of results directory ***
[2026-02-02 02:13:36] total 900372
[2026-02-02 02:13:36] -rwx------ 1 boinc boinc     36322 Feb  1 17:37 runpilot2-wrapper.sh
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc      5111 Feb  1 17:42 queuedata.json
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc    584422 Feb  1 17:42 pilot3.tar.gz
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc       100 Feb  2 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 02:13:36] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 01:01 run_atlas
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc       105 Feb  2 01:01 job.xml
[2026-02-02 02:13:36] -rw-r--r-- 2 boinc boinc 651144919 Feb  2 01:01 EVNT.48431111._000010.pool.root.1
[2026-02-02 02:13:36] -rw-r--r-- 2 boinc boinc     15845 Feb  2 01:01 start_atlas.sh
[2026-02-02 02:13:36] drwxrwx--x 2 boinc boinc      4096 Feb  2 01:01 shared
[2026-02-02 02:13:36] -rw-r--r-- 2 boinc boinc    597762 Feb  2 01:01 input.tar.gz
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc      9417 Feb  2 01:01 init_data.xml
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc         0 Feb  2 01:01 boinc_setup_complete
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc         0 Feb  2 01:01 boinc_lockfile
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc      2542 Feb  2 01:01 pandaJob.out
[2026-02-02 02:13:36] -rw------- 1 boinc boinc   1009765 Feb  2 01:01 agis_schedconf.cvmfs.json
[2026-02-02 02:13:36] -rw------- 1 boinc boinc   1511668 Feb  2 01:01 agis_ddmendpoints.agis.ALL.json
[2026-02-02 02:13:36] -rw------- 1 boinc boinc       421 Feb  2 01:01 workernode_map.json
[2026-02-02 02:13:36] drwx------ 5 boinc boinc      4096 Feb  2 01:01 pilot3
[2026-02-02 02:13:36] -rw------- 1 boinc boinc 264914142 Feb  2 02:11 HITS.48431113._000458.pool.root.1
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc       530 Feb  2 02:11 boinc_task_state.xml
[2026-02-02 02:13:36] -rw------- 1 boinc boinc        95 Feb  2 02:12 pilot_heartbeat.json
[2026-02-02 02:13:36] -rw------- 1 boinc boinc      1030 Feb  2 02:12 memory_monitor_summary.json
[2026-02-02 02:13:36] -rw------- 1 boinc boinc    373298 Feb  2 02:12 log.48431113._000458.job.log.tgz.1
[2026-02-02 02:13:36] -rw------- 1 boinc boinc      6287 Feb  2 02:12 heartbeat.json
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc      8192 Feb  2 02:13 boinc_mmap_file
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc        27 Feb  2 02:13 wrapper_checkpoint.txt
[2026-02-02 02:13:36] -rw------- 1 boinc boinc      5346 Feb  2 02:13 pilotlog.txt
[2026-02-02 02:13:36] -rw------- 1 boinc boinc    616275 Feb  2 02:13 log.48431113._000458.job.log.1
[2026-02-02 02:13:36] -rw------- 1 boinc boinc       357 Feb  2 02:13 output.list
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc       620 Feb  2 02:13 runtime_log
[2026-02-02 02:13:36] -rw------- 1 boinc boinc   1003520 Feb  2 02:13 result.tar.gz
[2026-02-02 02:13:36] -rw------- 1 boinc boinc       643 Feb  2 02:13 ZQ3NDmdZq68n9Rq4apOajLDm4fhM0noT9bVooX4SDm3YQKDm73acfm.diag
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc      8787 Feb  2 02:13 runtime_log.err
[2026-02-02 02:13:36] -rw-r--r-- 1 boinc boinc     21004 Feb  2 02:13 stderr.txt
[2026-02-02 02:13:36] HITS file was successfully produced:
[2026-02-02 02:13:36] -rw------- 1 boinc boinc 264914142 Feb  2 02:11 shared/HITS.pool.root.1
[2026-02-02 02:13:36]  *** Contents of shared directory: ***
[2026-02-02 02:13:36] total 896180
[2026-02-02 02:13:36] -rw-r--r-- 2 boinc boinc 651144919 Feb  2 01:01 ATLAS.root_0
[2026-02-02 02:13:36] -rw-r--r-- 2 boinc boinc     15845 Feb  2 01:01 start_atlas.sh
[2026-02-02 02:13:36] -rw-r--r-- 2 boinc boinc    597762 Feb  2 01:01 input.tar.gz
[2026-02-02 02:13:36] -rw------- 1 boinc boinc 264914142 Feb  2 02:11 HITS.pool.root.1
[2026-02-02 02:13:36] -rw------- 1 boinc boinc   1003520 Feb  2 02:13 result.tar.gz
02:13:38 (2193107): run_atlas exited; CPU time 46601.836528
02:13:38 (2193107): called boinc_finish(0)

</stderr_txt>
]]>

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