Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:14:10 (25860): wrapper (7.7.26015): starting
09:14:10 (25860): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 09:14:10] Arguments: --nthreads 8
[2026-02-02 09:14:10] Threads: 8
[2026-02-02 09:14:10] Checking for CVMFS
[2026-02-02 09:14:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 09:14:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 09:14:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 09:14:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 09:14:13] 2.11.2.0 4174 69720 90708 155779 0 138 23186489 25165824 3266 130560 0 24601982 99.792 20443625 3195 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-02 09:14:13] CVMFS is ok
[2026-02-02 09:14:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 09:14:13] Checking for apptainer binary...
[2026-02-02 09:14:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 09:14:13] Running /usr/bin/apptainer --version
[2026-02-02 09:14:13] apptainer version 1.3.2-1.el7
[2026-02-02 09:14:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 09:14:22] cg-vwn425.simple-grid.lan
[2026-02-02 09:14:22] apptainer works
[2026-02-02 09:14:22] Set ATHENA_PROC_NUMBER=8
[2026-02-02 09:14:22] Set ATHENA_CORE_NUMBER=8
[2026-02-02 09:14:23] Starting ATLAS job with PandaID=6983344304
[2026-02-02 09:14:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 13:43:04]  *** The last 200 lines of the pilot log: ***
[2026-02-02 13:43:04] 2026-02-02 12:42:02,064 | INFO     | extracted standard info from prmon json
[2026-02-02 13:43:04] 2026-02-02 12:42:02,065 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 13:43:04] 2026-02-02 12:42:02,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 13:43:04] 2026-02-02 12:42:02,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 13:43:04] 2026-02-02 12:42:02,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 13:43:04] 2026-02-02 12:42:02,070 | INFO     | fitting pss+swap vs Time
[2026-02-02 13:43:04] 2026-02-02 12:42:02,071 | INFO     | sum of square deviations: 5263458688.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,073 | INFO     | sum of deviations: -42025834283.00006
[2026-02-02 13:43:04] 2026-02-02 12:42:02,074 | INFO     | mean x: 1770028302.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,074 | INFO     | mean y: 2519122.3073929963
[2026-02-02 13:43:04] 2026-02-02 12:42:02,074 | INFO     | intersect: 14135225486.216824
[2026-02-02 13:43:04] 2026-02-02 12:42:02,075 | INFO     | chi2: 2.6997780308453456
[2026-02-02 13:43:04] 2026-02-02 12:42:02,075 | INFO     | sum of square deviations: 4962187923.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,077 | INFO     | sum of deviations: -24061458082.5
[2026-02-02 13:43:04] 2026-02-02 12:42:02,078 | INFO     | mean x: 1770028149.5
[2026-02-02 13:43:04] 2026-02-02 12:42:02,078 | INFO     | mean y: 2528080.0992063493
[2026-02-02 13:43:04] 2026-02-02 12:42:02,078 | INFO     | intersect: 8585326391.028732
[2026-02-02 13:43:04] 2026-02-02 12:42:02,078 | INFO     | chi2: 1.935816890666147
[2026-02-02 13:43:04] 2026-02-02 12:42:02,078 | INFO     | current chi2=1.935816890666147 (change=28.297183377701224 %)
[2026-02-02 13:43:04] 2026-02-02 12:42:02,079 | INFO     | sum of square deviations: 4672638308.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,081 | INFO     | sum of deviations: -23341802866.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,081 | INFO     | mean x: 1770027997.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,082 | INFO     | mean y: 2528459.186234818
[2026-02-02 13:43:04] 2026-02-02 12:42:02,082 | INFO     | intersect: 8844566265.22368
[2026-02-02 13:43:04] 2026-02-02 12:42:02,082 | INFO     | chi2: 1.9345161969599098
[2026-02-02 13:43:04] 2026-02-02 12:42:02,082 | INFO     | current chi2=1.9345161969599098 (change=0.06719094726927446 %)
[2026-02-02 13:43:04] 2026-02-02 12:42:02,082 | INFO     | right removable region: 246
[2026-02-02 13:43:04] 2026-02-02 12:42:02,083 | INFO     | sum of square deviations: 4962187923.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,085 | INFO     | sum of deviations: -87183286993.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,085 | INFO     | mean x: 1770028454.5
[2026-02-02 13:43:04] 2026-02-02 12:42:02,085 | INFO     | mean y: 2541811.5
[2026-02-02 13:43:04] 2026-02-02 12:42:02,086 | INFO     | intersect: 31101101787.268528
[2026-02-02 13:43:04] 2026-02-02 12:42:02,086 | INFO     | chi2: 1.0366109641783323
[2026-02-02 13:43:04] 2026-02-02 12:42:02,086 | INFO     | current chi2=1.0366109641783323 (change=61.60384474816427 %)
[2026-02-02 13:43:04] 2026-02-02 12:42:02,087 | INFO     | sum of square deviations: 4672638308.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,089 | INFO     | sum of deviations: -83579019825.99998
[2026-02-02 13:43:04] 2026-02-02 12:42:02,089 | INFO     | mean x: 1770028607.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,089 | INFO     | mean y: 2539890.2591093117
[2026-02-02 13:43:04] 2026-02-02 12:42:02,089 | INFO     | intersect: 31662866730.399406
[2026-02-02 13:43:04] 2026-02-02 12:42:02,090 | INFO     | chi2: 1.0269199475812187
[2026-02-02 13:43:04] 2026-02-02 12:42:02,090 | INFO     | current chi2=1.0269199475812187 (change=0.9348749851199137 %)
[2026-02-02 13:43:04] 2026-02-02 12:42:02,090 | INFO     | left removable region: 20
[2026-02-02 13:43:04] 2026-02-02 12:42:02,090 | INFO     | sum of square deviations: 3579276412.5
[2026-02-02 13:43:04] 2026-02-02 12:42:02,092 | INFO     | sum of deviations: -49323679815.0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,092 | INFO     | mean x: 1770028576.5
[2026-02-02 13:43:04] 2026-02-02 12:42:02,093 | INFO     | mean y: 2541799.690265487
[2026-02-02 13:43:04] 2026-02-02 12:42:02,098 | INFO     | intersect: 24394154156.252354
[2026-02-02 13:43:04] 2026-02-02 12:42:02,098 | INFO     | chi2: 0.22059567312089048
[2026-02-02 13:43:04] 2026-02-02 12:42:02,099 | INFO     | current memory leak: -13.78 B/s (using 226 data points, chi2=0.22)
[2026-02-02 13:43:04] 2026-02-02 12:42:02,099 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-02 13:43:04] 2026-02-02 12:42:02,099 | INFO     | ..............................
[2026-02-02 13:43:04] 2026-02-02 12:42:02,099 | INFO     | . Timing measurements:
[2026-02-02 13:43:04] 2026-02-02 12:42:02,100 | INFO     | . get job = 0 s
[2026-02-02 13:43:04] 2026-02-02 12:42:02,100 | INFO     | . initial setup = 82 s
[2026-02-02 13:43:04] 2026-02-02 12:42:02,100 | INFO     | . payload setup = 83 s
[2026-02-02 13:43:04] 2026-02-02 12:42:02,100 | INFO     | . stage-in = 0 s
[2026-02-02 13:43:04] 2026-02-02 12:42:02,100 | INFO     | . payload execution = 15720 s
[2026-02-02 13:43:04] 2026-02-02 12:42:02,100 | INFO     | . stage-out = 3 s
[2026-02-02 13:43:04] 2026-02-02 12:42:02,100 | INFO     | . log creation = 1 s
[2026-02-02 13:43:04] 2026-02-02 12:42:02,100 | INFO     | ..............................
[2026-02-02 13:43:04] 2026-02-02 12:42:02,381 | INFO     | 
[2026-02-02 13:43:04] 2026-02-02 12:42:02,381 | INFO     | job summary report
[2026-02-02 13:43:04] 2026-02-02 12:42:02,381 | INFO     | --------------------------------------------------
[2026-02-02 13:43:04] 2026-02-02 12:42:02,381 | INFO     | PanDA job id: 6983344304
[2026-02-02 13:43:04] 2026-02-02 12:42:02,381 | INFO     | task id: 48317872
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | errors: (none)
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | pilot state: finished 
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | transexitcode: 0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | exeerrorcode: 0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | exeerrordiag: 
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | exitcode: 0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | exitmsg: OK
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | cpuconsumptiontime: 59613 s
[2026-02-02 13:43:04] 2026-02-02 12:42:02,382 | INFO     | nevents: 400
[2026-02-02 13:43:04] 2026-02-02 12:42:02,383 | INFO     | neventsw: 0
[2026-02-02 13:43:04] 2026-02-02 12:42:02,383 | INFO     | pid: 2600
[2026-02-02 13:43:04] 2026-02-02 12:42:02,383 | INFO     | pgrp: 2600
[2026-02-02 13:43:04] 2026-02-02 12:42:02,383 | INFO     | corecount: 8
[2026-02-02 13:43:04] 2026-02-02 12:42:02,383 | INFO     | event service: False
[2026-02-02 13:43:04] 2026-02-02 12:42:02,383 | INFO     | sizes: {0: 2277827, 1: 2278288, 2: 2278288, 15807: 2309442, 15811: 2318442, 15814: 2318498, 15815: 2318820}
[2026-02-02 13:43:04] 2026-02-02 12:42:02,383 | INFO     | --------------------------------------------------
[2026-02-02 13:43:04] 2026-02-02 12:42:02,383 | INFO     | 
[2026-02-02 13:43:04] 2026-02-02 12:42:02,383 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-02-02 13:43:04] 2026-02-02 12:42:02,464 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,465 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,465 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,465 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,467 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 13:43:04] 2026-02-02 12:42:02,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,467 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 13:43:04] 2026-02-02 12:42:02,467 | INFO     | job 6983344304 has completed (purged errors)
[2026-02-02 13:43:04] 2026-02-02 12:42:02,467 | INFO     | overall cleanup function is called
[2026-02-02 13:43:04] 2026-02-02 12:42:03,133 | INFO     | PID=30235 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 13:43:04] 2026-02-02 12:42:03,134 | INFO     | .. there are 9 such processes running
[2026-02-02 13:43:04] 2026-02-02 12:42:03,477 | INFO     | --- collectZombieJob: --- 10, [2600]
[2026-02-02 13:43:04] 2026-02-02 12:42:03,477 | INFO     | zombie collector waiting for pid 2600
[2026-02-02 13:43:04] 2026-02-02 12:42:03,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 13:43:04] 2026-02-02 12:42:03,477 | INFO     | collected zombie processes
[2026-02-02 13:43:04] 2026-02-02 12:42:03,477 | INFO     | will attempt to kill all subprocesses of pid=2600
[2026-02-02 13:43:04] 2026-02-02 12:42:03,585 | INFO     | process IDs to be killed: [2600] (in reverse order)
[2026-02-02 13:43:04] 2026-02-02 12:42:03,760 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 13:43:04] 2026-02-02 12:42:03,760 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 13:43:04] 2026-02-02 12:42:03,763 | INFO     | did not find any defunct processes belonging to 2600
[2026-02-02 13:43:04] 2026-02-02 12:42:03,767 | INFO     | did not find any defunct processes belonging to 2600
[2026-02-02 13:43:04] 2026-02-02 12:42:03,768 | INFO     | ready for new job
[2026-02-02 13:43:04] 2026-02-02 12:42:03,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 13:43:04] 2026-02-02 12:42:03,770 | INFO     | **************************************
[2026-02-02 13:43:04] 2026-02-02 12:42:03,770 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 13:43:04] 2026-02-02 12:42:03,771 | INFO     | **************************************
[2026-02-02 13:43:04] 2026-02-02 12:42:03,774 | INFO     | 
[2026-02-02 13:43:04] 2026-02-02 12:42:03,774 | INFO     | pilot is running in a VM
[2026-02-02 13:43:04] 2026-02-02 12:42:03,775 | INFO     | architecture information:
[2026-02-02 13:43:04] 2026-02-02 12:42:03,780 | INFO     | executing command: cat /etc/os-release
[2026-02-02 13:43:04] 2026-02-02 12:42:03,866 | INFO     | cat /etc/os-release:
[2026-02-02 13:43:04] NAME="CentOS Linux"
[2026-02-02 13:43:04] VERSION="7 (Core)"
[2026-02-02 13:43:04] ID="centos"
[2026-02-02 13:43:04] ID_LIKE="rhel fedora"
[2026-02-02 13:43:04] VERSION_ID="7"
[2026-02-02 13:43:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 13:43:04] ANSI_COLOR="0;31"
[2026-02-02 13:43:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 13:43:04] HOME_URL="https://www.centos.org/"
[2026-02-02 13:43:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 13:43:04] 
[2026-02-02 13:43:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 13:43:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 13:43:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 13:43:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 13:43:04] 
[2026-02-02 13:43:04] 2026-02-02 12:42:03,867 | INFO     | **************************************
[2026-02-02 13:43:04] 2026-02-02 12:42:04,372 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-02-02 13:43:04] 2026-02-02 12:42:04,482 | INFO     | sufficient remaining disk space (492015976448 B)
[2026-02-02 13:43:04] 2026-02-02 12:42:04,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 13:43:04] 2026-02-02 12:42:04,483 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 13:43:04] 2026-02-02 12:42:04,483 | INFO     | update_server=False
[2026-02-02 13:43:04] 2026-02-02 12:42:04,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 13:43:04] 2026-02-02 12:42:04,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 13:43:04] 2026-02-02 12:42:04,900 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 13:43:04] 2026-02-02 12:42:04,900 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 13:43:04] 2026-02-02 12:42:04,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:43:04] 2026-02-02 12:42:04,900 | INFO     | will abort loop
[2026-02-02 13:43:04] 2026-02-02 12:42:04,965 | INFO     | all payload control threads have been joined
[2026-02-02 13:43:04] 2026-02-02 12:42:05,478 | INFO     | all data control threads have been joined
[2026-02-02 13:43:04] 2026-02-02 12:42:05,489 | INFO     | [job] retrieve thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:05,649 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:05,701 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:05,812 | INFO     | [payload] validate_post thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:05,892 | INFO     | [data] copytool_in thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:05,906 | INFO     | [job] job monitor thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:05,971 | INFO     | [payload] control thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:06,112 | INFO     | all job control threads have been joined
[2026-02-02 13:43:04] 2026-02-02 12:42:06,132 | INFO     | [job] validate thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:06,152 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:06,262 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:06,384 | INFO     | [payload] failed_post thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:06,485 | INFO     | [data] control thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:06,494 | INFO     | [data] copytool_out thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:07,118 | INFO     | [job] control thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:07,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 13:43:04] 2026-02-02 12:42:07,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 13:43:04] 2026-02-02 12:42:08,289 | INFO     | [job] queue monitor thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:11,875 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 13:43:04] 2026-02-02 12:42:35,360 | INFO     | PID=30235 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 13:43:04] 2026-02-02 12:42:35,360 | INFO     | .. there are 9 such processes running
[2026-02-02 13:43:04] 2026-02-02 12:42:35,360 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 13:43:04] 2026-02-02 12:42:35,360 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 13:43:04] 2026-02-02 12:42:35,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 13:43:04] 2026-02-02 12:42:52,293 | INFO     | [monitor] cgroup control has ended
[2026-02-02 13:43:04] 2026-02-02 12:42:54,099 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140443654047552)>', '<ExcThread(monitor, started 140443056588544)>']
[2026-02-02 13:43:04] 2026-02-02 12:42:54,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 13:43:04] 2026-02-02 12:42:54,471 | INFO     | [monitor] control thread has ended
[2026-02-02 13:43:04] 2026-02-02 12:42:59,125 | INFO     | all workflow threads have been joined
[2026-02-02 13:43:04] 2026-02-02 12:42:59,125 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 13:43:04] 2026-02-02 12:42:59,125 | INFO     | traces error code: 0
[2026-02-02 13:43:04] 2026-02-02 12:42:59,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 13:43:04] 2026-02-02 12:42:59,527 [wrapper] ==== pilot stdout END ====
[2026-02-02 13:43:04] 2026-02-02 12:42:59,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 13:43:04] 2026-02-02 12:42:59,701 [wrapper] pilotpid: 30235
[2026-02-02 13:43:04] 2026-02-02 12:42:59,801 [wrapper] Pilot exit status: 0
[2026-02-02 13:43:04] 2026-02-02 12:43:00,275 [wrapper] pandaids: 6983344304
[2026-02-02 13:43:04] 2026-02-02 12:43:01,012 [wrapper] cleanup supervisor_pilot 20658 30236
[2026-02-02 13:43:04] 2026-02-02 12:43:01,064 [wrapper] Test setup, not cleaning
[2026-02-02 13:43:04] 2026-02-02 12:43:01,107 [wrapper] apfmon messages muted
[2026-02-02 13:43:04] 2026-02-02 12:43:01,189 [wrapper] ==== wrapper stdout END ====
[2026-02-02 13:43:04] 2026-02-02 12:43:01,257 [wrapper] ==== wrapper stderr END ====
[2026-02-02 13:43:04]  *** Error codes and diagnostics ***
[2026-02-02 13:43:04]     "exeErrorCode": 0,
[2026-02-02 13:43:04]     "exeErrorDiag": "",
[2026-02-02 13:43:04]     "pilotErrorCode": 0,
[2026-02-02 13:43:04]     "pilotErrorDiag": "",
[2026-02-02 13:43:04]  *** Listing of results directory ***
[2026-02-02 13:43:04] total 677276
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc    584422 Jan 25 19:47 pilot3.tar.gz
[2026-02-02 13:43:04] -rwx------. 1 boinc boinc     36322 Jan 25 19:52 runpilot2-wrapper.sh
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc      5111 Jan 25 19:56 queuedata.json
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc       100 Feb  2 09:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 13:43:04] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 09:14 run_atlas
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc       105 Feb  2 09:14 job.xml
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc      6392 Feb  2 09:14 init_data.xml
[2026-02-02 13:43:04] -rw-r--r--. 2 boinc boinc 499948440 Feb  2 09:14 EVNT.48317869._000012.pool.root.1
[2026-02-02 13:43:04] -rw-r--r--. 2 boinc boinc     15845 Feb  2 09:14 start_atlas.sh
[2026-02-02 13:43:04] drwxrwx--x. 2 boinc boinc        68 Feb  2 09:14 shared
[2026-02-02 13:43:04] -rw-r--r--. 2 boinc boinc    597753 Feb  2 09:14 input.tar.gz
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc         0 Feb  2 09:14 boinc_lockfile
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc      2512 Feb  2 09:14 pandaJob.out
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc       415 Feb  2 09:18 workernode_map.json
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc   1008375 Feb  2 09:18 agis_schedconf.cvmfs.json
[2026-02-02 13:43:04] drwx------. 5 boinc boinc      4096 Feb  2 09:18 pilot3
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc 184261769 Feb  2 13:41 HITS.48317872._000586.pool.root.1
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc       531 Feb  2 13:41 boinc_task_state.xml
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc        95 Feb  2 13:41 pilot_heartbeat.json
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc      1013 Feb  2 13:41 memory_monitor_summary.json
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc   1511668 Feb  2 13:41 agis_ddmendpoints.agis.ALL.json
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc    501183 Feb  2 13:41 log.48317872._000586.job.log.tgz.1
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc      6314 Feb  2 13:42 heartbeat.json
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc      8192 Feb  2 13:42 boinc_mmap_file
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc        28 Feb  2 13:42 wrapper_checkpoint.txt
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc      5067 Feb  2 13:42 pilotlog.txt
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc   2196723 Feb  2 13:43 log.48317872._000586.job.log.1
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc       357 Feb  2 13:43 output.list
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc       620 Feb  2 13:43 runtime_log
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc   2713600 Feb  2 13:43 result.tar.gz
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc      8832 Feb  2 13:43 runtime_log.err
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc       656 Feb  2 13:43 BUYLDmVOK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDe1KDmSjVSLm.diag
[2026-02-02 13:43:04] -rw-r--r--. 1 boinc boinc     20745 Feb  2 13:43 stderr.txt
[2026-02-02 13:43:04] HITS file was successfully produced:
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc 184261769 Feb  2 13:41 shared/HITS.pool.root.1
[2026-02-02 13:43:04]  *** Contents of shared directory: ***
[2026-02-02 13:43:04] total 671428
[2026-02-02 13:43:04] -rw-r--r--. 2 boinc boinc 499948440 Feb  2 09:14 ATLAS.root_0
[2026-02-02 13:43:04] -rw-r--r--. 2 boinc boinc     15845 Feb  2 09:14 start_atlas.sh
[2026-02-02 13:43:04] -rw-r--r--. 2 boinc boinc    597753 Feb  2 09:14 input.tar.gz
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc 184261769 Feb  2 13:41 HITS.pool.root.1
[2026-02-02 13:43:04] -rw-------. 1 boinc boinc   2713600 Feb  2 13:43 result.tar.gz
13:43:06 (25860): run_atlas exited; CPU time 59866.894381
13:43:06 (25860): called boinc_finish(0)

</stderr_txt>
]]>

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