Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:24:34 (428861): wrapper (7.7.26015): starting
16:24:34 (428861): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 16:24:34] Arguments: --nthreads 4
[2026-02-02 16:24:34] Threads: 4
[2026-02-02 16:24:34] Checking for CVMFS
[2026-02-02 16:24:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 16:24:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 16:24:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 16:24:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 16:24:35] 2.9.2.0 3251459 7119 101296 155792 1 50 23272124 36864001 0 130560 0 3399589 99.987 237200 8069 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 16:24:35] CVMFS is ok
[2026-02-02 16:24:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 16:24:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 16:24:35] Further information can be found at the LHC@home message board.
[2026-02-02 16:24:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 16:24:35] Checking for apptainer binary...
[2026-02-02 16:24:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 16:24:35] Running /usr/bin/apptainer --version
[2026-02-02 16:24:35] apptainer version 1.4.1-1.1
[2026-02-02 16:24:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 16:24:35] thA314
[2026-02-02 16:24:35] apptainer works
[2026-02-02 16:24:35] Set ATHENA_PROC_NUMBER=4
[2026-02-02 16:24:35] Set ATHENA_CORE_NUMBER=4
[2026-02-02 16:24:35] Starting ATLAS job with PandaID=6992459551
[2026-02-02 16:24:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 18:06:00]  *** The last 200 lines of the pilot log: ***
[2026-02-02 18:06:00]  guid=b8a817fe-fc41-4827-8672-3977a70183ab
[2026-02-02 18:06:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 18:06:00]  is_altstaged=None
[2026-02-02 18:06:00]  is_tar=False
[2026-02-02 18:06:00]  lfn=log.48431113._000443.job.log.tgz.1
[2026-02-02 18:06:00]  mtime=0
[2026-02-02 18:06:00]  protocol_id=None
[2026-02-02 18:06:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 18:06:00]  replicas=None
[2026-02-02 18:06:00]  scope=mc23_13p6TeV
[2026-02-02 18:06:00]  status=None
[2026-02-02 18:06:00]  status_code=0
[2026-02-02 18:06:00]  storage_token=
[2026-02-02 18:06:00]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6992459551/log.48431113._000443.job.log.tgz.1
[2026-02-02 18:06:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/c6/log.48431113._000443.job.log.tgz.1
[2026-02-02 18:06:00]  workdir=None
[2026-02-02 18:06:00] ]
[2026-02-02 18:06:00] 2026-02-02 17:04:49,793 | INFO     | transferring file log.48431113._000443.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6992459551/log.48431113._000443.job.log.tgz.1 to /local/data/boinc/
[2026-02-02 18:06:00] 2026-02-02 17:04:49,794 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6992459551/log.48431113._000443.job.log.tgz.1 /local/data/boinc/slots/0/log.48431113._0004
[2026-02-02 18:06:00] 2026-02-02 17:04:49,813 | INFO     | adding to output.list: log.48431113._000443.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/c6/log.48431113._000443.job.log.tg
[2026-02-02 18:06:00] 2026-02-02 17:04:49,814 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 18:06:00] 2026-02-02 17:04:49,814 | INFO     | summary of transferred files:
[2026-02-02 18:06:00] 2026-02-02 17:04:49,814 | INFO     |  -- lfn=log.48431113._000443.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 18:06:00] 2026-02-02 17:04:49,814 | INFO     | stage-out finished correctly
[2026-02-02 18:06:00] 2026-02-02 17:04:50,890 | INFO     | time since job start (6002s) is within the limit (349056.0s)
[2026-02-02 18:06:00] 2026-02-02 17:04:52,896 | INFO     | time since job start (6004s) is within the limit (349056.0s)
[2026-02-02 18:06:00] 2026-02-02 17:04:53,118 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 18:06:00] 2026-02-02 17:04:53,369 | WARNING  | process 437509 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 18:06:00] 2026-02-02 17:04:53,369 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6992459551/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 18:06:00] 2026-02-02 17:04:53,414 | INFO     | number of running child processes to parent process 437509: 1
[2026-02-02 18:06:00] 2026-02-02 17:04:53,414 | INFO     | maximum number of monitored processes: 6
[2026-02-02 18:06:00] 2026-02-02 17:04:54,652 | INFO     | job 6992459551 has state=finished
[2026-02-02 18:06:00] 2026-02-02 17:04:54,653 | INFO     | preparing for final server update for job 6992459551 in state='finished'
[2026-02-02 18:06:00] 2026-02-02 17:04:54,653 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6992459551/jobReport.json
[2026-02-02 18:06:00] 2026-02-02 17:04:54,654 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-02 18:06:00] 2026-02-02 17:04:54,654 | INFO     | this job has now completed (state=finished)
[2026-02-02 18:06:00] 2026-02-02 17:04:54,654 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 18:06:00] 2026-02-02 17:04:54,654 | INFO     | log transfer has been attempted: DONE
[2026-02-02 18:06:00] 2026-02-02 17:04:54,654 | INFO     | job 6992459551 has finished - writing final server update
[2026-02-02 18:06:00] 2026-02-02 17:04:54,655 | INFO     | total number of processed events: 400 (read)
[2026-02-02 18:06:00] 2026-02-02 17:04:54,656 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6992459551/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 18:06:00] 2026-02-02 17:04:54,657 | INFO     | extracted standard info from prmon json
[2026-02-02 18:06:00] 2026-02-02 17:04:54,657 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 18:06:00] 2026-02-02 17:04:54,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 18:06:00] 2026-02-02 17:04:54,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 18:06:00] 2026-02-02 17:04:54,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 18:06:00] 2026-02-02 17:04:54,658 | INFO     | fitting pss+swap vs Time
[2026-02-02 18:06:00] 2026-02-02 17:04:54,658 | INFO     | sum of square deviations: 241429643.0
[2026-02-02 18:06:00] 2026-02-02 17:04:54,658 | INFO     | sum of deviations: -16835843626.500002
[2026-02-02 18:06:00] 2026-02-02 17:04:54,658 | INFO     | mean x: 1770048987.5
[2026-02-02 18:06:00] 2026-02-02 17:04:54,658 | INFO     | mean y: 2558401.097826087
[2026-02-02 18:06:00] 2026-02-02 17:04:54,658 | INFO     | intersect: 123435073126.70116
[2026-02-02 18:06:00] 2026-02-02 17:04:54,658 | INFO     | chi2: 0.05985243992958518
[2026-02-02 18:06:00] 2026-02-02 17:04:54,658 | INFO     | current memory leak: -69.73 B/s (using 92 data points, chi2=0.06)
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | could have reported an average CPU frequency of 3376 MHz (7 samples)
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | ..............................
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | . Timing measurements:
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | . get job = 0 s
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | . initial setup = 4 s
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | . payload setup = 4 s
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | . stage-in = 0 s
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | . payload execution = 5982 s
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | . stage-out = 0 s
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | . log creation = 0 s
[2026-02-02 18:06:00] 2026-02-02 17:04:54,659 | INFO     | ..............................
[2026-02-02 18:06:00] 2026-02-02 17:04:54,806 | INFO     | 
[2026-02-02 18:06:00] 2026-02-02 17:04:54,806 | INFO     | job summary report
[2026-02-02 18:06:00] 2026-02-02 17:04:54,806 | INFO     | --------------------------------------------------
[2026-02-02 18:06:00] 2026-02-02 17:04:54,806 | INFO     | PanDA job id: 6992459551
[2026-02-02 18:06:00] 2026-02-02 17:04:54,806 | INFO     | task id: 48431113
[2026-02-02 18:06:00] 2026-02-02 17:04:54,806 | INFO     | errors: (none)
[2026-02-02 18:06:00] 2026-02-02 17:04:54,806 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 18:06:00] 2026-02-02 17:04:54,806 | INFO     | pilot state: finished 
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | transexitcode: 0
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | exeerrorcode: 0
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | exeerrordiag: 
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | exitcode: 0
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | exitmsg: OK
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | cpuconsumptiontime: 22973 s
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | nevents: 400
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | neventsw: 0
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | pid: 437509
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | pgrp: 437509
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | corecount: 4
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | event service: False
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | sizes: {0: 2278095, 1: 2278301, 11: 2278329, 5990: 2305242, 5991: 2314246, 5994: 2314302, 5995: 2314624}
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | --------------------------------------------------
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | 
[2026-02-02 18:06:00] 2026-02-02 17:04:54,807 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-02 18:06:00] 2026-02-02 17:04:54,828 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,828 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,828 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,828 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | job 6992459551 has completed (purged errors)
[2026-02-02 18:06:00] 2026-02-02 17:04:54,829 | INFO     | overall cleanup function is called
[2026-02-02 18:06:00] 2026-02-02 17:04:55,836 | INFO     | --- collectZombieJob: --- 10, [437509]
[2026-02-02 18:06:00] 2026-02-02 17:04:55,836 | INFO     | zombie collector waiting for pid 437509
[2026-02-02 18:06:00] 2026-02-02 17:04:55,836 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 18:06:00] 2026-02-02 17:04:55,836 | INFO     | collected zombie processes
[2026-02-02 18:06:00] 2026-02-02 17:04:55,837 | INFO     | will attempt to kill all subprocesses of pid=437509
[2026-02-02 18:06:00] 2026-02-02 17:04:55,885 | INFO     | process IDs to be killed: [437509] (in reverse order)
[2026-02-02 18:06:00] 2026-02-02 17:04:55,920 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 18:06:00] 2026-02-02 17:04:55,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 18:06:00] 2026-02-02 17:04:55,922 | INFO     | did not find any defunct processes belonging to 437509
[2026-02-02 18:06:00] 2026-02-02 17:04:55,924 | INFO     | did not find any defunct processes belonging to 437509
[2026-02-02 18:06:00] 2026-02-02 17:04:55,924 | INFO     | ready for new job
[2026-02-02 18:06:00] 2026-02-02 17:04:55,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 18:06:00] 2026-02-02 17:04:55,925 | INFO     | **************************************
[2026-02-02 18:06:00] 2026-02-02 17:04:55,925 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 18:06:00] 2026-02-02 17:04:55,925 | INFO     | **************************************
[2026-02-02 18:06:00] 2026-02-02 17:04:55,925 | INFO     | 
[2026-02-02 18:06:00] 2026-02-02 17:04:55,925 | INFO     | architecture information:
[2026-02-02 18:06:00] 2026-02-02 17:04:55,926 | INFO     | executing command: cat /etc/os-release
[2026-02-02 18:06:00] 2026-02-02 17:04:55,940 | INFO     | cat /etc/os-release:
[2026-02-02 18:06:00] NAME="CentOS Linux"
[2026-02-02 18:06:00] VERSION="7 (Core)"
[2026-02-02 18:06:00] ID="centos"
[2026-02-02 18:06:00] ID_LIKE="rhel fedora"
[2026-02-02 18:06:00] VERSION_ID="7"
[2026-02-02 18:06:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 18:06:00] ANSI_COLOR="0;31"
[2026-02-02 18:06:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 18:06:00] HOME_URL="https://www.centos.org/"
[2026-02-02 18:06:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 18:06:00] 
[2026-02-02 18:06:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 18:06:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 18:06:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 18:06:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 18:06:00] 
[2026-02-02 18:06:00] 2026-02-02 17:04:55,941 | INFO     | **************************************
[2026-02-02 18:06:00] 2026-02-02 17:04:56,444 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-02 18:06:00] 2026-02-02 17:04:56,461 | INFO     | sufficient remaining disk space (230756974592 B)
[2026-02-02 18:06:00] 2026-02-02 17:04:56,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 18:06:00] 2026-02-02 17:04:56,462 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 18:06:00] 2026-02-02 17:04:56,462 | INFO     | update_server=False
[2026-02-02 18:06:00] 2026-02-02 17:04:56,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 18:06:00] 2026-02-02 17:04:56,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 18:06:00] 2026-02-02 17:04:56,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 18:06:00] 2026-02-02 17:04:56,923 | INFO     | aborting loop
[2026-02-02 18:06:00] 2026-02-02 17:04:57,374 | INFO     | all data control threads have been joined
[2026-02-02 18:06:00] 2026-02-02 17:04:57,438 | INFO     | all payload control threads have been joined
[2026-02-02 18:06:00] 2026-02-02 17:04:57,468 | INFO     | [job] retrieve thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:57,468 | INFO     | [job] queue monitor thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:57,472 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:57,692 | INFO     | [data] copytool_in thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:57,830 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:57,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 18:06:00] 2026-02-02 17:04:57,873 | INFO     | all job control threads have been joined
[2026-02-02 18:06:00] 2026-02-02 17:04:57,914 | INFO     | [payload] failed_post thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:57,928 | INFO     | [job] job monitor thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:58,380 | INFO     | [data] control thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:58,429 | INFO     | [payload] validate_post thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:58,439 | INFO     | [payload] control thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:58,840 | INFO     | [job] validate thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:58,879 | INFO     | [job] control thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:58,924 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:04:59,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 18:06:00] 2026-02-02 17:04:59,873 | INFO     | [data] copytool_out thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:05:03,176 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:05:06,961 | INFO     | job.realtimelogging is not enabled
[2026-02-02 18:06:00] 2026-02-02 17:05:07,967 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 18:06:00] 2026-02-02 17:05:26,024 | INFO     | PID=432972 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 18:06:00] 2026-02-02 17:05:26,024 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 18:06:00] 2026-02-02 17:05:26,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 18:06:00] 2026-02-02 17:05:26,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 18:06:00] 2026-02-02 17:05:54,720 | INFO     | [monitor] cgroup control has ended
[2026-02-02 18:06:00] 2026-02-02 17:05:54,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310370273088)>', '<ExcThread(monitor, started 140308998256384)>']
[2026-02-02 18:06:00] 2026-02-02 17:05:55,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 18:06:00] 2026-02-02 17:05:55,168 | INFO     | [monitor] control thread has ended
[2026-02-02 18:06:00] 2026-02-02 17:05:59,948 | INFO     | all workflow threads have been joined
[2026-02-02 18:06:00] 2026-02-02 17:05:59,948 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 18:06:00] 2026-02-02 17:05:59,949 | INFO     | traces error code: 0
[2026-02-02 18:06:00] 2026-02-02 17:05:59,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 18:06:00] 2026-02-02 17:06:00,030 [wrapper] ==== pilot stdout END ====
[2026-02-02 18:06:00] 2026-02-02 17:06:00,035 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 18:06:00] 2026-02-02 17:06:00,039 [wrapper] pilotpid: 432972
[2026-02-02 18:06:00] 2026-02-02 17:06:00,043 [wrapper] Pilot exit status: 0
[2026-02-02 18:06:00] 2026-02-02 17:06:00,055 [wrapper] pandaids: 6992459551
[2026-02-02 18:06:00] 2026-02-02 17:06:00,081 [wrapper] cleanup supervisor_pilot  444478 432973
[2026-02-02 18:06:00] 2026-02-02 17:06:00,084 [wrapper] Test setup, not cleaning
[2026-02-02 18:06:00] 2026-02-02 17:06:00,089 [wrapper] apfmon messages muted
[2026-02-02 18:06:00] 2026-02-02 17:06:00,093 [wrapper] ==== wrapper stdout END ====
[2026-02-02 18:06:00] 2026-02-02 17:06:00,096 [wrapper] ==== wrapper stderr END ====
[2026-02-02 18:06:00]  *** Error codes and diagnostics ***
[2026-02-02 18:06:00]     "exeErrorCode": 0,
[2026-02-02 18:06:00]     "exeErrorDiag": "",
[2026-02-02 18:06:00]     "pilotErrorCode": 0,
[2026-02-02 18:06:00]     "pilotErrorDiag": "",
[2026-02-02 18:06:00]  *** Listing of results directory ***
[2026-02-02 18:06:00] total 891036
[2026-02-02 18:06:00] -rwx------ 1 boinc boinc     36322 Feb  1 18:37 runpilot2-wrapper.sh
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc      5111 Feb  1 18:42 queuedata.json
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc    584422 Feb  1 18:42 pilot3.tar.gz
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc       100 Feb  2 16:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 18:06:00] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 16:24 run_atlas
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc       105 Feb  2 16:24 job.xml
[2026-02-02 18:06:00] -rw-r--r-- 2 boinc boinc 647465719 Feb  2 16:24 EVNT.48431111._000009.pool.root.1
[2026-02-02 18:06:00] -rw-r--r-- 2 boinc boinc    597767 Feb  2 16:24 input.tar.gz
[2026-02-02 18:06:00] -rw-r--r-- 2 boinc boinc     15845 Feb  2 16:24 start_atlas.sh
[2026-02-02 18:06:00] drwxrwx--x 2 boinc boinc      4096 Feb  2 16:24 shared
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc         0 Feb  2 16:24 boinc_setup_complete
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc      6376 Feb  2 16:24 init_data.xml
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc         0 Feb  2 16:24 boinc_lockfile
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc      2543 Feb  2 16:24 pandaJob.out
[2026-02-02 18:06:00] -rw------- 1 boinc boinc   1009772 Feb  2 16:24 agis_schedconf.cvmfs.json
[2026-02-02 18:06:00] -rw------- 1 boinc boinc   1511668 Feb  2 16:24 agis_ddmendpoints.agis.ALL.json
[2026-02-02 18:06:00] -rw------- 1 boinc boinc       427 Feb  2 16:24 workernode_map.json
[2026-02-02 18:06:00] drwx------ 5 boinc boinc      4096 Feb  2 16:24 pilot3
[2026-02-02 18:06:00] -rw------- 1 boinc boinc 258635092 Feb  2 18:04 HITS.48431113._000443.pool.root.1
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc       530 Feb  2 18:04 boinc_task_state.xml
[2026-02-02 18:06:00] -rw------- 1 boinc boinc      1020 Feb  2 18:04 memory_monitor_summary.json
[2026-02-02 18:06:00] -rw------- 1 boinc boinc    317505 Feb  2 18:04 log.48431113._000443.job.log.tgz.1
[2026-02-02 18:06:00] -rw------- 1 boinc boinc      6311 Feb  2 18:04 heartbeat.json
[2026-02-02 18:06:00] -rw------- 1 boinc boinc        95 Feb  2 18:05 pilot_heartbeat.json
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc        27 Feb  2 18:05 wrapper_checkpoint.txt
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc      8192 Feb  2 18:05 boinc_mmap_file
[2026-02-02 18:06:00] -rw------- 1 boinc boinc      4819 Feb  2 18:05 pilotlog.txt
[2026-02-02 18:06:00] -rw------- 1 boinc boinc    868579 Feb  2 18:06 log.48431113._000443.job.log.1
[2026-02-02 18:06:00] -rw------- 1 boinc boinc       357 Feb  2 18:06 output.list
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc       620 Feb  2 18:06 runtime_log
[2026-02-02 18:06:00] -rw------- 1 boinc boinc   1208320 Feb  2 18:06 result.tar.gz
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc      8896 Feb  2 18:06 runtime_log.err
[2026-02-02 18:06:00] -rw------- 1 boinc boinc       657 Feb  2 18:06 VpjNDmdZq68n9Rq4apOajLDm4fhM0noT9bVooX4SDmpYQKDmSNCnSm.diag
[2026-02-02 18:06:00] -rw-r--r-- 1 boinc boinc     21393 Feb  2 18:06 stderr.txt
[2026-02-02 18:06:00] HITS file was successfully produced:
[2026-02-02 18:06:00] -rw------- 1 boinc boinc 258635092 Feb  2 18:04 shared/HITS.pool.root.1
[2026-02-02 18:06:00]  *** Contents of shared directory: ***
[2026-02-02 18:06:00] total 886656
[2026-02-02 18:06:00] -rw-r--r-- 2 boinc boinc 647465719 Feb  2 16:24 ATLAS.root_0
[2026-02-02 18:06:00] -rw-r--r-- 2 boinc boinc    597767 Feb  2 16:24 input.tar.gz
[2026-02-02 18:06:00] -rw-r--r-- 2 boinc boinc     15845 Feb  2 16:24 start_atlas.sh
[2026-02-02 18:06:00] -rw------- 1 boinc boinc 258635092 Feb  2 18:04 HITS.pool.root.1
[2026-02-02 18:06:00] -rw------- 1 boinc boinc   1208320 Feb  2 18:06 result.tar.gz
18:06:01 (428861): run_atlas exited; CPU time 23006.809598
18:06:01 (428861): called boinc_finish(0)

</stderr_txt>
]]>

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