Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:23:40 (16962): wrapper (7.7.26015): starting
13:23:40 (16962): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 13:23:40] Arguments: --nthreads 8
[2026-02-02 13:23:40] Threads: 8
[2026-02-02 13:23:40] Checking for CVMFS
[2026-02-02 13:23:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 13:23:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 13:23:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 13:23:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 13:23:45] 2.11.2.0 11585 69969 133224 155787 3 93 19588801 25165825 937 130560 0 25445972 99.851 17056421 3197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-02 13:23:45] CVMFS is ok
[2026-02-02 13:23:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 13:23:45] Checking for apptainer binary...
[2026-02-02 13:23:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 13:23:45] Running /usr/bin/apptainer --version
[2026-02-02 13:23:45] apptainer version 1.3.2-1.el7
[2026-02-02 13:23:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 13:24:17] cg-vwn455.simple-grid.lan
[2026-02-02 13:24:17] apptainer works
[2026-02-02 13:24:17] Set ATHENA_PROC_NUMBER=8
[2026-02-02 13:24:17] Set ATHENA_CORE_NUMBER=8
[2026-02-02 13:24:17] Starting ATLAS job with PandaID=6992471352
[2026-02-02 13:24:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 18:11:04]  *** The last 200 lines of the pilot log: ***
[2026-02-02 18:11:04] 2026-02-02 17:10:05,079 | INFO     | log transfer has been attempted: DONE
[2026-02-02 18:11:04] 2026-02-02 17:10:05,080 | INFO     | job 6992471352 has finished - writing final server update
[2026-02-02 18:11:04] 2026-02-02 17:10:05,080 | INFO     | total number of processed events: 400 (read)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,082 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6992471352/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,082 | INFO     | extracted standard info from prmon json
[2026-02-02 18:11:04] 2026-02-02 17:10:05,083 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 18:11:04] 2026-02-02 17:10:05,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 18:11:04] 2026-02-02 17:10:05,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 18:11:04] 2026-02-02 17:10:05,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 18:11:04] 2026-02-02 17:10:05,088 | INFO     | fitting pss+swap vs Time
[2026-02-02 18:11:04] 2026-02-02 17:10:05,089 | INFO     | sum of square deviations: 6103272315.496324
[2026-02-02 18:11:04] 2026-02-02 17:10:05,091 | INFO     | sum of deviations: 95809793537.43689
[2026-02-02 18:11:04] 2026-02-02 17:10:05,091 | INFO     | mean x: 1770043942.5037036
[2026-02-02 18:11:04] 2026-02-02 17:10:05,092 | INFO     | mean y: 2463788.562962963
[2026-02-02 18:11:04] 2026-02-02 17:10:05,092 | INFO     | intersect: -27783867201.9263
[2026-02-02 18:11:04] 2026-02-02 17:10:05,092 | INFO     | chi2: 7.58423072631965
[2026-02-02 18:11:04] 2026-02-02 17:10:05,093 | INFO     | sum of square deviations: 5770438472.996242
[2026-02-02 18:11:04] 2026-02-02 17:10:05,095 | INFO     | sum of deviations: 111968945446.19626
[2026-02-02 18:11:04] 2026-02-02 17:10:05,098 | INFO     | mean x: 1770043790.0037737
[2026-02-02 18:11:04] 2026-02-02 17:10:05,098 | INFO     | mean y: 2471068.803773585
[2026-02-02 18:11:04] 2026-02-02 17:10:05,098 | INFO     | intersect: -34343261493.422626
[2026-02-02 18:11:04] 2026-02-02 17:10:05,099 | INFO     | chi2: 6.876896914016969
[2026-02-02 18:11:04] 2026-02-02 17:10:05,099 | INFO     | current chi2=6.876896914016969 (change=9.3263751832867 %)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,099 | INFO     | right removable region: 264
[2026-02-02 18:11:04] 2026-02-02 17:10:05,100 | INFO     | sum of square deviations: 5770437862.996242
[2026-02-02 18:11:04] 2026-02-02 17:10:05,102 | INFO     | sum of deviations: 1459634587.7358704
[2026-02-02 18:11:04] 2026-02-02 17:10:05,102 | INFO     | mean x: 1770044095.0037737
[2026-02-02 18:11:04] 2026-02-02 17:10:05,102 | INFO     | mean y: 2506989.2641509436
[2026-02-02 18:11:04] 2026-02-02 17:10:05,102 | INFO     | intersect: -445226379.36857665
[2026-02-02 18:11:04] 2026-02-02 17:10:05,103 | INFO     | chi2: 2.7417619135460134
[2026-02-02 18:11:04] 2026-02-02 17:10:05,103 | INFO     | current chi2=2.7417619135460134 (change=63.84917584282815 %)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,103 | INFO     | sum of square deviations: 5449929222.996161
[2026-02-02 18:11:04] 2026-02-02 17:10:05,105 | INFO     | sum of deviations: -51892315174.10771
[2026-02-02 18:11:04] 2026-02-02 17:10:05,106 | INFO     | mean x: 1770044247.5038462
[2026-02-02 18:11:04] 2026-02-02 17:10:05,106 | INFO     | mean y: 2532258.107692308
[2026-02-02 18:11:04] 2026-02-02 17:10:05,106 | INFO     | intersect: 16856272959.182226
[2026-02-02 18:11:04] 2026-02-02 17:10:05,106 | INFO     | chi2: 0.9944889043492204
[2026-02-02 18:11:04] 2026-02-02 17:10:05,106 | INFO     | current chi2=0.9944889043492204 (change=63.72810857734127 %)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,107 | INFO     | sum of square deviations: 5141513832.996051
[2026-02-02 18:11:04] 2026-02-02 17:10:05,109 | INFO     | sum of deviations: -55728335836.11766
[2026-02-02 18:11:04] 2026-02-02 17:10:05,109 | INFO     | mean x: 1770044400.0039215
[2026-02-02 18:11:04] 2026-02-02 17:10:05,109 | INFO     | mean y: 2534126.117647059
[2026-02-02 18:11:04] 2026-02-02 17:10:05,109 | INFO     | intersect: 19187862022.197178
[2026-02-02 18:11:04] 2026-02-02 17:10:05,110 | INFO     | chi2: 0.9578338025973547
[2026-02-02 18:11:04] 2026-02-02 17:10:05,110 | INFO     | current chi2=0.9578338025973547 (change=3.6858230988361087 %)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,110 | INFO     | left removable region: 30
[2026-02-02 18:11:04] 2026-02-02 17:10:05,110 | INFO     | sum of square deviations: 3972995422.5
[2026-02-02 18:11:04] 2026-02-02 17:10:05,112 | INFO     | sum of deviations: -13759168021.5
[2026-02-02 18:11:04] 2026-02-02 17:10:05,112 | INFO     | mean x: 1770044674.5
[2026-02-02 18:11:04] 2026-02-02 17:10:05,112 | INFO     | mean y: 2529883.2863247865
[2026-02-02 18:11:04] 2026-02-02 17:10:05,113 | INFO     | intersect: 6132499715.1372385
[2026-02-02 18:11:04] 2026-02-02 17:10:05,113 | INFO     | chi2: 0.10523334581003858
[2026-02-02 18:11:04] 2026-02-02 17:10:05,113 | INFO     | current memory leak: -3.46 B/s (using 234 data points, chi2=0.11)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,114 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,114 | INFO     | ..............................
[2026-02-02 18:11:04] 2026-02-02 17:10:05,114 | INFO     | . Timing measurements:
[2026-02-02 18:11:04] 2026-02-02 17:10:05,114 | INFO     | . get job = 0 s
[2026-02-02 18:11:04] 2026-02-02 17:10:05,114 | INFO     | . initial setup = 123 s
[2026-02-02 18:11:04] 2026-02-02 17:10:05,114 | INFO     | . payload setup = 166 s
[2026-02-02 18:11:04] 2026-02-02 17:10:05,114 | INFO     | . stage-in = 0 s
[2026-02-02 18:11:04] 2026-02-02 17:10:05,115 | INFO     | . payload execution = 16588 s
[2026-02-02 18:11:04] 2026-02-02 17:10:05,115 | INFO     | . stage-out = 4 s
[2026-02-02 18:11:04] 2026-02-02 17:10:05,115 | INFO     | . log creation = 1 s
[2026-02-02 18:11:04] 2026-02-02 17:10:05,115 | INFO     | ..............................
[2026-02-02 18:11:04] 2026-02-02 17:10:05,252 | INFO     | 
[2026-02-02 18:11:04] 2026-02-02 17:10:05,253 | INFO     | job summary report
[2026-02-02 18:11:04] 2026-02-02 17:10:05,253 | INFO     | --------------------------------------------------
[2026-02-02 18:11:04] 2026-02-02 17:10:05,253 | INFO     | PanDA job id: 6992471352
[2026-02-02 18:11:04] 2026-02-02 17:10:05,253 | INFO     | task id: 48318026
[2026-02-02 18:11:04] 2026-02-02 17:10:05,253 | INFO     | errors: (none)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,253 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 18:11:04] 2026-02-02 17:10:05,253 | INFO     | pilot state: finished 
[2026-02-02 18:11:04] 2026-02-02 17:10:05,253 | INFO     | transexitcode: 0
[2026-02-02 18:11:04] 2026-02-02 17:10:05,253 | INFO     | exeerrorcode: 0
[2026-02-02 18:11:04] 2026-02-02 17:10:05,254 | INFO     | exeerrordiag: 
[2026-02-02 18:11:04] 2026-02-02 17:10:05,254 | INFO     | exitcode: 0
[2026-02-02 18:11:04] 2026-02-02 17:10:05,254 | INFO     | exitmsg: OK
[2026-02-02 18:11:04] 2026-02-02 17:10:05,254 | INFO     | cpuconsumptiontime: 60646 s
[2026-02-02 18:11:04] 2026-02-02 17:10:05,254 | INFO     | nevents: 400
[2026-02-02 18:11:04] 2026-02-02 17:10:05,254 | INFO     | neventsw: 0
[2026-02-02 18:11:04] 2026-02-02 17:10:05,254 | INFO     | pid: 25508
[2026-02-02 18:11:04] 2026-02-02 17:10:05,254 | INFO     | pgrp: 25508
[2026-02-02 18:11:04] 2026-02-02 17:10:05,254 | INFO     | corecount: 8
[2026-02-02 18:11:04] 2026-02-02 17:10:05,255 | INFO     | event service: False
[2026-02-02 18:11:04] 2026-02-02 17:10:05,255 | INFO     | sizes: {0: 2277178, 1: 2277863, 2: 2278324, 13: 2278324, 16758: 2310256, 16763: 2319254, 16765: 2319438, 16767: 2319632}
[2026-02-02 18:11:04] 2026-02-02 17:10:05,255 | INFO     | --------------------------------------------------
[2026-02-02 18:11:04] 2026-02-02 17:10:05,255 | INFO     | 
[2026-02-02 18:11:04] 2026-02-02 17:10:05,255 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-02-02 18:11:04] 2026-02-02 17:10:05,849 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,849 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,849 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,849 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,851 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,851 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 18:11:04] 2026-02-02 17:10:05,851 | INFO     | job 6992471352 has completed (purged errors)
[2026-02-02 18:11:04] 2026-02-02 17:10:05,851 | INFO     | overall cleanup function is called
[2026-02-02 18:11:04] 2026-02-02 17:10:06,860 | INFO     | --- collectZombieJob: --- 10, [25508]
[2026-02-02 18:11:04] 2026-02-02 17:10:06,860 | INFO     | zombie collector waiting for pid 25508
[2026-02-02 18:11:04] 2026-02-02 17:10:06,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 18:11:04] 2026-02-02 17:10:06,861 | INFO     | collected zombie processes
[2026-02-02 18:11:04] 2026-02-02 17:10:06,861 | INFO     | will attempt to kill all subprocesses of pid=25508
[2026-02-02 18:11:04] 2026-02-02 17:10:06,934 | INFO     | process IDs to be killed: [25508] (in reverse order)
[2026-02-02 18:11:04] 2026-02-02 17:10:07,697 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 18:11:04] 2026-02-02 17:10:07,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 18:11:04] 2026-02-02 17:10:07,699 | INFO     | did not find any defunct processes belonging to 25508
[2026-02-02 18:11:04] 2026-02-02 17:10:07,701 | INFO     | did not find any defunct processes belonging to 25508
[2026-02-02 18:11:04] 2026-02-02 17:10:07,701 | INFO     | ready for new job
[2026-02-02 18:11:04] 2026-02-02 17:10:07,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 18:11:04] 2026-02-02 17:10:07,703 | INFO     | **************************************
[2026-02-02 18:11:04] 2026-02-02 17:10:07,704 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 18:11:04] 2026-02-02 17:10:07,704 | INFO     | **************************************
[2026-02-02 18:11:04] 2026-02-02 17:10:07,704 | INFO     | 
[2026-02-02 18:11:04] 2026-02-02 17:10:07,704 | INFO     | pilot is running in a VM
[2026-02-02 18:11:04] 2026-02-02 17:10:07,705 | INFO     | architecture information:
[2026-02-02 18:11:04] 2026-02-02 17:10:07,711 | INFO     | executing command: cat /etc/os-release
[2026-02-02 18:11:04] 2026-02-02 17:10:08,036 | INFO     | cat /etc/os-release:
[2026-02-02 18:11:04] NAME="CentOS Linux"
[2026-02-02 18:11:04] VERSION="7 (Core)"
[2026-02-02 18:11:04] ID="centos"
[2026-02-02 18:11:04] ID_LIKE="rhel fedora"
[2026-02-02 18:11:04] VERSION_ID="7"
[2026-02-02 18:11:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 18:11:04] ANSI_COLOR="0;31"
[2026-02-02 18:11:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 18:11:04] HOME_URL="https://www.centos.org/"
[2026-02-02 18:11:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 18:11:04] 
[2026-02-02 18:11:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 18:11:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 18:11:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 18:11:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 18:11:04] 
[2026-02-02 18:11:04] 2026-02-02 17:10:08,036 | INFO     | **************************************
[2026-02-02 18:11:04] 2026-02-02 17:10:08,539 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-02-02 18:11:04] 2026-02-02 17:10:08,793 | INFO     | sufficient remaining disk space (494893268992 B)
[2026-02-02 18:11:04] 2026-02-02 17:10:08,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 18:11:04] 2026-02-02 17:10:08,793 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 18:11:04] 2026-02-02 17:10:08,794 | INFO     | update_server=False
[2026-02-02 18:11:04] 2026-02-02 17:10:08,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 18:11:04] 2026-02-02 17:10:09,196 | INFO     | all data control threads have been joined
[2026-02-02 18:11:04] 2026-02-02 17:10:09,275 | INFO     | all job control threads have been joined
[2026-02-02 18:11:04] 2026-02-02 17:10:09,506 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 18:11:04] 2026-02-02 17:10:09,507 | INFO     | aborting loop
[2026-02-02 18:11:04] 2026-02-02 17:10:09,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 18:11:04] 2026-02-02 17:10:09,799 | INFO     | [job] retrieve thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:09,935 | INFO     | [job] validate thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:09,936 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:10,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 18:11:04] 2026-02-02 17:10:10,066 | INFO     | all payload control threads have been joined
[2026-02-02 18:11:04] 2026-02-02 17:10:10,202 | INFO     | [data] control thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:10,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 18:11:04] 2026-02-02 17:10:10,281 | INFO     | [job] control thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:10,512 | INFO     | [job] job monitor thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:10,696 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:10,946 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:10,947 | INFO     | [data] copytool_in thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:11,072 | INFO     | [payload] control thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:11,076 | INFO     | [payload] failed_post thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:11,099 | INFO     | [payload] validate_post thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:11,121 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:11,277 | INFO     | [job] queue monitor thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:11,617 | INFO     | [data] copytool_out thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:14,070 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 18:11:04] 2026-02-02 17:10:37,422 | INFO     | PID=21021 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 18:11:04] 2026-02-02 17:10:37,422 | INFO     | .. there are 2 such processes running
[2026-02-02 18:11:04] 2026-02-02 17:10:37,422 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 18:11:04] 2026-02-02 17:10:37,422 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 18:11:04] 2026-02-02 17:10:37,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 18:11:04] 2026-02-02 17:10:53,975 | INFO     | [monitor] cgroup control has ended
[2026-02-02 18:11:04] 2026-02-02 17:10:55,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094887122752)>', '<ExcThread(monitor, started 140094300215040)>']
[2026-02-02 18:11:04] 2026-02-02 17:10:55,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 18:11:04] 2026-02-02 17:10:55,532 | INFO     | [monitor] control thread has ended
[2026-02-02 18:11:04] 2026-02-02 17:11:00,200 | INFO     | all workflow threads have been joined
[2026-02-02 18:11:04] 2026-02-02 17:11:00,201 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 18:11:04] 2026-02-02 17:11:00,201 | INFO     | traces error code: 0
[2026-02-02 18:11:04] 2026-02-02 17:11:00,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 18:11:04] 2026-02-02 17:11:00,543 [wrapper] ==== pilot stdout END ====
[2026-02-02 18:11:04] 2026-02-02 17:11:00,640 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 18:11:04] 2026-02-02 17:11:00,735 [wrapper] pilotpid: 21021
[2026-02-02 18:11:04] 2026-02-02 17:11:00,817 [wrapper] Pilot exit status: 0
[2026-02-02 18:11:04] 2026-02-02 17:11:01,309 [wrapper] pandaids: 6992471352
[2026-02-02 18:11:04] 2026-02-02 17:11:02,189 [wrapper] cleanup supervisor_pilot 32422 21022
[2026-02-02 18:11:04] 2026-02-02 17:11:02,270 [wrapper] Test setup, not cleaning
[2026-02-02 18:11:04] 2026-02-02 17:11:02,369 [wrapper] apfmon messages muted
[2026-02-02 18:11:04] 2026-02-02 17:11:02,483 [wrapper] ==== wrapper stdout END ====
[2026-02-02 18:11:04] 2026-02-02 17:11:02,595 [wrapper] ==== wrapper stderr END ====
[2026-02-02 18:11:04]  *** Error codes and diagnostics ***
[2026-02-02 18:11:04]     "exeErrorCode": 0,
[2026-02-02 18:11:04]     "exeErrorDiag": "",
[2026-02-02 18:11:04]     "pilotErrorCode": 0,
[2026-02-02 18:11:04]     "pilotErrorDiag": "",
[2026-02-02 18:11:04]  *** Listing of results directory ***
[2026-02-02 18:11:04] total 724744
[2026-02-02 18:11:04] -rwx------. 1 boinc boinc     36322 Feb  1 18:37 runpilot2-wrapper.sh
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc      5111 Feb  1 18:42 queuedata.json
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc    584422 Feb  1 18:42 pilot3.tar.gz
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc       100 Feb  2 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 18:11:04] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 13:23 run_atlas
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc       105 Feb  2 13:23 job.xml
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc      6390 Feb  2 13:23 init_data.xml
[2026-02-02 18:11:04] -rw-r--r--. 2 boinc boinc 532189764 Feb  2 13:23 EVNT.48318024._000053.pool.root.1
[2026-02-02 18:11:04] -rw-r--r--. 2 boinc boinc     15845 Feb  2 13:23 start_atlas.sh
[2026-02-02 18:11:04] drwxrwx--x. 2 boinc boinc        68 Feb  2 13:23 shared
[2026-02-02 18:11:04] -rw-r--r--. 2 boinc boinc    597777 Feb  2 13:23 input.tar.gz
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc         0 Feb  2 13:23 boinc_lockfile
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc      2527 Feb  2 13:24 pandaJob.out
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc       413 Feb  2 13:30 workernode_map.json
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc   1008375 Feb  2 13:30 agis_schedconf.cvmfs.json
[2026-02-02 18:11:04] drwx------. 5 boinc boinc      4096 Feb  2 13:30 pilot3
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc 200283706 Feb  2 18:08 HITS.48318026._002594.pool.root.1
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc       531 Feb  2 18:08 boinc_task_state.xml
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc      1015 Feb  2 18:09 memory_monitor_summary.json
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc   1511668 Feb  2 18:09 agis_ddmendpoints.agis.ALL.json
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc    511471 Feb  2 18:10 log.48318026._002594.job.log.tgz.1
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc      6314 Feb  2 18:10 heartbeat.json
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc        95 Feb  2 18:10 pilot_heartbeat.json
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc      8192 Feb  2 18:10 boinc_mmap_file
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc        28 Feb  2 18:10 wrapper_checkpoint.txt
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc      4880 Feb  2 18:11 pilotlog.txt
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc   2356791 Feb  2 18:11 log.48318026._002594.job.log.1
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc       357 Feb  2 18:11 output.list
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc       620 Feb  2 18:11 runtime_log
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc   2887680 Feb  2 18:11 result.tar.gz
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc      8816 Feb  2 18:11 runtime_log.err
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc       655 Feb  2 18:11 51VLDmUZq68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3tQKDm2KMFcn.diag
[2026-02-02 18:11:04] -rw-r--r--. 1 boinc boinc     20704 Feb  2 18:11 stderr.txt
[2026-02-02 18:11:04] HITS file was successfully produced:
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc 200283706 Feb  2 18:08 shared/HITS.pool.root.1
[2026-02-02 18:11:04]  *** Contents of shared directory: ***
[2026-02-02 18:11:04] total 718732
[2026-02-02 18:11:04] -rw-r--r--. 2 boinc boinc 532189764 Feb  2 13:23 ATLAS.root_0
[2026-02-02 18:11:04] -rw-r--r--. 2 boinc boinc     15845 Feb  2 13:23 start_atlas.sh
[2026-02-02 18:11:04] -rw-r--r--. 2 boinc boinc    597777 Feb  2 13:23 input.tar.gz
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc 200283706 Feb  2 18:08 HITS.pool.root.1
[2026-02-02 18:11:04] -rw-------. 1 boinc boinc   2887680 Feb  2 18:11 result.tar.gz
18:11:06 (16962): run_atlas exited; CPU time 60822.417928
18:11:06 (16962): called boinc_finish(0)

</stderr_txt>
]]>

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