Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:48:12 (1962750): wrapper (7.7.26015): starting
22:48:12 (1962750): wrapper: running run_atlas (--nthreads 3)
[2026-02-02 22:48:12] Arguments: --nthreads 3
[2026-02-02 22:48:12] Threads: 3
[2026-02-02 22:48:12] Checking for CVMFS
[2026-02-02 22:48:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 22:49:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 22:49:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 22:49:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 22:49:26] 2.13.3.0 1962971 1 29476 155788 3 1 16152893 31457281 0 130560 0 0 0.000 1338 68 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-02 22:49:26] CVMFS is ok
[2026-02-02 22:49:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 22:49:26] Checking for apptainer binary...
[2026-02-02 22:49:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 22:49:26] Running /usr/bin/apptainer --version
[2026-02-02 22:49:26] apptainer version 1.4.5-2.el9
[2026-02-02 22:49:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 22:49:26] testio001
[2026-02-02 22:49:26] apptainer works
[2026-02-02 22:49:26] Set ATHENA_PROC_NUMBER=3
[2026-02-02 22:49:26] Set ATHENA_CORE_NUMBER=3
[2026-02-02 22:49:26] Starting ATLAS job with PandaID=6996177686
[2026-02-02 22:49:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 00:46:40]  *** The last 200 lines of the pilot log: ***
[2026-02-03 00:46:40] 2026-02-02 15:45:48,129 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,129 | INFO     | log transfer has been attempted: DONE
[2026-02-03 00:46:40] 2026-02-02 15:45:48,129 | INFO     | job 6996177686 has finished - writing final server update
[2026-02-03 00:46:40] 2026-02-02 15:45:48,129 | INFO     | total number of processed events: 400 (read)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,130 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6996177686/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,130 | INFO     | extracted standard info from prmon json
[2026-02-03 00:46:40] 2026-02-02 15:45:48,130 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 00:46:40] 2026-02-02 15:45:48,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 00:46:40] 2026-02-02 15:45:48,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 00:46:40] 2026-02-02 15:45:48,131 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 00:46:40] 2026-02-02 15:45:48,131 | INFO     | fitting pss+swap vs Time
[2026-02-03 00:46:40] 2026-02-02 15:45:48,132 | INFO     | sum of square deviations: 447383272.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,132 | INFO     | sum of deviations: -15700202753.000002
[2026-02-03 00:46:40] 2026-02-02 15:45:48,132 | INFO     | mean x: 1770043718.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,132 | INFO     | mean y: 2376887.309734513
[2026-02-03 00:46:40] 2026-02-02 15:45:48,132 | INFO     | intersect: 62119239527.34595
[2026-02-03 00:46:40] 2026-02-02 15:45:48,132 | INFO     | chi2: 2.273095727522643
[2026-02-03 00:46:40] 2026-02-02 15:45:48,132 | INFO     | sum of square deviations: 390582207.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,132 | INFO     | sum of deviations: -8421677598.5
[2026-02-03 00:46:40] 2026-02-02 15:45:48,132 | INFO     | mean x: 1770043565.5
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | mean y: 2395813.1944444445
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | intersect: 38167821623.13263
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | chi2: 1.634253860064114
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | current chi2=1.634253860064114 (change=28.104485865836253 %)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | sum of square deviations: 338804492.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | sum of deviations: -7690860479.999999
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | mean x: 1770043413.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | mean y: 2397967.126213592
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | intersect: 40182375666.25901
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | chi2: 1.6307619724582416
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | current chi2=1.6307619724582416 (change=0.2136686160701801 %)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | right removable region: 102
[2026-02-03 00:46:40] 2026-02-02 15:45:48,133 | INFO     | sum of square deviations: 390582207.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | sum of deviations: -28279463238.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | mean x: 1770043870.5
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | mean y: 2409600.388888889
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | intersect: 128159529070.63649
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | chi2: 0.8951561618717033
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | current chi2=0.8951561618717033 (change=60.619513246487934 %)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | sum of square deviations: 338804492.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | sum of deviations: -23069079491.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | mean x: 1770044023.0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | mean y: 2394232.213592233
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | intersect: 120524073351.97105
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | chi2: 0.8829463664784265
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | current chi2=0.8829463664784265 (change=1.3639849574120197 %)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,134 | INFO     | left removable region: 20
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | sum of square deviations: 170944600.5
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | sum of deviations: -5770378783.500001
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | mean x: 1770043992.5
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | mean y: 2380094.1829268294
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | intersect: 59751703970.50879
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | chi2: 0.12294523176650816
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | current memory leak: -33.76 B/s (using 82 data points, chi2=0.12)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | could have reported an average CPU frequency of 3600 MHz (7 samples)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | ..............................
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | . Timing measurements:
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | . get job = 0 s
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | . initial setup = 9 s
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | . payload setup = 4 s
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | . stage-in = 0 s
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | . payload execution = 6844 s
[2026-02-03 00:46:40] 2026-02-02 15:45:48,135 | INFO     | . stage-out = 0 s
[2026-02-03 00:46:40] 2026-02-02 15:45:48,136 | INFO     | . log creation = 0 s
[2026-02-03 00:46:40] 2026-02-02 15:45:48,136 | INFO     | ..............................
[2026-02-03 00:46:40] 2026-02-02 15:45:48,169 | INFO     | 
[2026-02-03 00:46:40] 2026-02-02 15:45:48,169 | INFO     | job summary report
[2026-02-03 00:46:40] 2026-02-02 15:45:48,169 | INFO     | --------------------------------------------------
[2026-02-03 00:46:40] 2026-02-02 15:45:48,169 | INFO     | PanDA job id: 6996177686
[2026-02-03 00:46:40] 2026-02-02 15:45:48,169 | INFO     | task id: 48317872
[2026-02-03 00:46:40] 2026-02-02 15:45:48,169 | INFO     | errors: (none)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | pilot state: finished 
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | transexitcode: 0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | exeerrorcode: 0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | exeerrordiag: 
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | exitcode: 0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | exitmsg: OK
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | cpuconsumptiontime: 18433 s
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | nevents: 400
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | neventsw: 0
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | pid: 1971514
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | pgrp: 1971514
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | corecount: 3
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | event service: False
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | sizes: {0: 2277180, 1: 2278298, 11: 2278298, 6853: 2314549, 6854: 2314549, 6855: 2314743}
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | --------------------------------------------------
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | 
[2026-02-03 00:46:40] 2026-02-02 15:45:48,170 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,183 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,183 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,183 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 00:46:40] 2026-02-02 15:45:48,183 | INFO     | job 6996177686 has completed (purged errors)
[2026-02-03 00:46:40] 2026-02-02 15:45:48,183 | INFO     | overall cleanup function is called
[2026-02-03 00:46:40] 2026-02-02 15:45:49,188 | INFO     | --- collectZombieJob: --- 10, [1971514]
[2026-02-03 00:46:40] 2026-02-02 15:45:49,189 | INFO     | zombie collector waiting for pid 1971514
[2026-02-03 00:46:40] 2026-02-02 15:45:49,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 00:46:40] 2026-02-02 15:45:49,189 | INFO     | collected zombie processes
[2026-02-03 00:46:40] 2026-02-02 15:45:49,189 | INFO     | will attempt to kill all subprocesses of pid=1971514
[2026-02-03 00:46:40] 2026-02-02 15:45:49,219 | INFO     | process IDs to be killed: [1971514] (in reverse order)
[2026-02-03 00:46:40] 2026-02-02 15:45:49,240 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 00:46:40] 2026-02-02 15:45:49,241 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 00:46:40] 2026-02-02 15:45:49,242 | INFO     | did not find any defunct processes belonging to 1971514
[2026-02-03 00:46:40] 2026-02-02 15:45:49,243 | INFO     | did not find any defunct processes belonging to 1971514
[2026-02-03 00:46:40] 2026-02-02 15:45:49,243 | INFO     | ready for new job
[2026-02-03 00:46:40] 2026-02-02 15:45:49,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 00:46:40] 2026-02-02 15:45:49,244 | INFO     | **************************************
[2026-02-03 00:46:40] 2026-02-02 15:45:49,244 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 00:46:40] 2026-02-02 15:45:49,244 | INFO     | **************************************
[2026-02-03 00:46:40] 2026-02-02 15:45:49,244 | INFO     | 
[2026-02-03 00:46:40] 2026-02-02 15:45:49,244 | INFO     | architecture information:
[2026-02-03 00:46:40] 2026-02-02 15:45:49,244 | INFO     | executing command: cat /etc/os-release
[2026-02-03 00:46:40] 2026-02-02 15:45:49,251 | INFO     | cat /etc/os-release:
[2026-02-03 00:46:40] NAME="CentOS Linux"
[2026-02-03 00:46:40] VERSION="7 (Core)"
[2026-02-03 00:46:40] ID="centos"
[2026-02-03 00:46:40] ID_LIKE="rhel fedora"
[2026-02-03 00:46:40] VERSION_ID="7"
[2026-02-03 00:46:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 00:46:40] ANSI_COLOR="0;31"
[2026-02-03 00:46:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 00:46:40] HOME_URL="https://www.centos.org/"
[2026-02-03 00:46:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 00:46:40] 
[2026-02-03 00:46:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 00:46:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 00:46:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 00:46:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 00:46:40] 
[2026-02-03 00:46:40] 2026-02-02 15:45:49,251 | INFO     | **************************************
[2026-02-03 00:46:40] 2026-02-02 15:45:49,754 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-02-03 00:46:40] 2026-02-02 15:45:49,762 | INFO     | sufficient remaining disk space (131885694976 B)
[2026-02-03 00:46:40] 2026-02-02 15:45:49,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 00:46:40] 2026-02-02 15:45:49,762 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 00:46:40] 2026-02-02 15:45:49,762 | INFO     | update_server=False
[2026-02-03 00:46:40] 2026-02-02 15:45:49,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 00:46:40] 2026-02-02 15:45:49,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 00:46:40] 2026-02-02 15:45:49,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 00:46:40] 2026-02-02 15:45:49,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 00:46:40] 2026-02-02 15:45:50,025 | INFO     | all data control threads have been joined
[2026-02-03 00:46:40] 2026-02-02 15:45:50,293 | INFO     | all payload control threads have been joined
[2026-02-03 00:46:40] 2026-02-02 15:45:50,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 00:46:40] 2026-02-02 15:45:50,575 | INFO     | aborting loop
[2026-02-03 00:46:40] 2026-02-02 15:45:50,767 | INFO     | [job] retrieve thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:50,768 | INFO     | [job] queue monitor thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:50,906 | INFO     | all job control threads have been joined
[2026-02-03 00:46:40] 2026-02-02 15:45:51,029 | INFO     | [data] control thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,150 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,294 | INFO     | [payload] control thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,482 | INFO     | [payload] validate_post thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,580 | INFO     | [job] job monitor thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,614 | INFO     | [data] copytool_in thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,614 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,724 | INFO     | [job] validate thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,724 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,768 | INFO     | [data] copytool_out thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:51,911 | INFO     | [job] control thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:52,276 | INFO     | [payload] failed_post thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:45:53,768 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:46:00,668 | INFO     | job.realtimelogging is not enabled
[2026-02-03 00:46:40] 2026-02-02 15:46:01,673 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 00:46:40] 2026-02-02 15:46:19,946 | INFO     | PID=1967034 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 00:46:40] 2026-02-02 15:46:19,947 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 00:46:40] 2026-02-02 15:46:19,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 00:46:40] 2026-02-02 15:46:19,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 00:46:40] 2026-02-02 15:46:33,887 | INFO     | [monitor] cgroup control has ended
[2026-02-03 00:46:40] 2026-02-02 15:46:35,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306099951424)>', '<ExcThread(monitor, started 140305726674688)>']
[2026-02-03 00:46:40] 2026-02-02 15:46:36,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 00:46:40] 2026-02-02 15:46:36,027 | INFO     | [monitor] control thread has ended
[2026-02-03 00:46:40] 2026-02-02 15:46:40,658 | INFO     | all workflow threads have been joined
[2026-02-03 00:46:40] 2026-02-02 15:46:40,658 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 00:46:40] 2026-02-02 15:46:40,658 | INFO     | traces error code: 0
[2026-02-03 00:46:40] 2026-02-02 15:46:40,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 00:46:40] 2026-02-02 15:46:40,718 [wrapper] ==== pilot stdout END ====
[2026-02-03 00:46:40] 2026-02-02 15:46:40,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 00:46:40] 2026-02-02 15:46:40,721 [wrapper] pilotpid: 1967034
[2026-02-03 00:46:40] 2026-02-02 15:46:40,723 [wrapper] Pilot exit status: 0
[2026-02-03 00:46:40] 2026-02-02 15:46:40,729 [wrapper] pandaids: 6996177686
[2026-02-03 00:46:40] 2026-02-02 15:46:40,740 [wrapper] cleanup supervisor_pilot 1976370 1967035
[2026-02-03 00:46:40] 2026-02-02 15:46:40,741 [wrapper] Test setup, not cleaning
[2026-02-03 00:46:40] 2026-02-02 15:46:40,743 [wrapper] apfmon messages muted
[2026-02-03 00:46:40] 2026-02-02 15:46:40,744 [wrapper] ==== wrapper stdout END ====
[2026-02-03 00:46:40] 2026-02-02 15:46:40,746 [wrapper] ==== wrapper stderr END ====
[2026-02-03 00:46:40]  *** Error codes and diagnostics ***
[2026-02-03 00:46:40]     "exeErrorCode": 0,
[2026-02-03 00:46:40]     "exeErrorDiag": "",
[2026-02-03 00:46:40]     "pilotErrorCode": 0,
[2026-02-03 00:46:40]     "pilotErrorDiag": "",
[2026-02-03 00:46:40]  *** Listing of results directory ***
[2026-02-03 00:46:40] total 672144
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc    584422 Feb  2 02:33 pilot3.tar.gz
[2026-02-03 00:46:40] -rwx------. 1 boinc boinc     36322 Feb  2 02:37 runpilot2-wrapper.sh
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc      5111 Feb  2 02:40 queuedata.json
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc       100 Feb  2 22:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 00:46:40] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 22:48 run_atlas
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc       105 Feb  2 22:48 job.xml
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc      9312 Feb  2 22:48 init_data.xml
[2026-02-03 00:46:40] -rw-r--r--. 2 boinc boinc 503554808 Feb  2 22:48 EVNT.48317869._000325.pool.root.1
[2026-02-03 00:46:40] -rw-r--r--. 2 boinc boinc     15845 Feb  2 22:48 start_atlas.sh
[2026-02-03 00:46:40] drwxrwx--x. 2 boinc boinc        68 Feb  2 22:48 shared
[2026-02-03 00:46:40] -rw-r--r--. 2 boinc boinc    597759 Feb  2 22:48 input.tar.gz
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc         0 Feb  2 22:48 boinc_lockfile
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc      2519 Feb  2 22:49 pandaJob.out
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc   1009833 Feb  2 22:51 agis_schedconf.cvmfs.json
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc   1511668 Feb  2 22:51 agis_ddmendpoints.agis.ALL.json
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc       426 Feb  2 22:51 workernode_map.json
[2026-02-03 00:46:40] drwx------. 5 boinc boinc      4096 Feb  2 22:51 pilot3
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc 178296968 Feb  3 00:45 HITS.48317872._017721.pool.root.1
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc      1016 Feb  3 00:45 memory_monitor_summary.json
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc       530 Feb  3 00:45 boinc_task_state.xml
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc    270635 Feb  3 00:45 log.48317872._017721.job.log.tgz.1
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc      6323 Feb  3 00:45 heartbeat.json
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc        95 Feb  3 00:46 pilot_heartbeat.json
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc        27 Feb  3 00:46 wrapper_checkpoint.txt
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc      8192 Feb  3 00:46 boinc_mmap_file
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc      4817 Feb  3 00:46 pilotlog.txt
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc    974995 Feb  3 00:46 log.48317872._017721.job.log.1
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc       357 Feb  3 00:46 output.list
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc       620 Feb  3 00:46 runtime_log
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc   1259520 Feb  3 00:46 result.tar.gz
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc      8774 Feb  3 00:46 runtime_log.err
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc       643 Feb  3 00:46 9dpLDm3Yq68n9Rq4apOajLDm4fhM0noT9bVooX4SDmlTQKDmLuk4Oo.diag
[2026-02-03 00:46:40] -rw-r--r--. 1 boinc boinc     20700 Feb  3 00:46 stderr.txt
[2026-02-03 00:46:40] HITS file was successfully produced:
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc 178296968 Feb  3 00:45 shared/HITS.pool.root.1
[2026-02-03 00:46:40]  *** Contents of shared directory: ***
[2026-02-03 00:46:40] total 667708
[2026-02-03 00:46:40] -rw-r--r--. 2 boinc boinc 503554808 Feb  2 22:48 ATLAS.root_0
[2026-02-03 00:46:40] -rw-r--r--. 2 boinc boinc     15845 Feb  2 22:48 start_atlas.sh
[2026-02-03 00:46:40] -rw-r--r--. 2 boinc boinc    597759 Feb  2 22:48 input.tar.gz
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc 178296968 Feb  3 00:45 HITS.pool.root.1
[2026-02-03 00:46:40] -rw-------. 1 boinc boinc   1259520 Feb  3 00:46 result.tar.gz
00:46:42 (1962750): run_atlas exited; CPU time 18460.098607
00:46:42 (1962750): called boinc_finish(0)

</stderr_txt>
]]>

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