Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:38:06 (27226): wrapper (7.7.26015): starting
07:38:06 (27226): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 07:38:06] Arguments: --nthreads 8
[2026-02-02 07:38:06] Threads: 8
[2026-02-02 07:38:06] Checking for CVMFS
[2026-02-02 07:38:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 07:38:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 07:38:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 07:38:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 07:38:12] 2.11.2.0 28598 69624 129656 155777 3 94 23154237 25165825 939 130560 0 26766922 99.831 17578687 2611 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-02 07:38:12] CVMFS is ok
[2026-02-02 07:38:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 07:38:12] Checking for apptainer binary...
[2026-02-02 07:38:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 07:38:12] Running /usr/bin/apptainer --version
[2026-02-02 07:38:12] apptainer version 1.3.2-1.el7
[2026-02-02 07:38:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 07:38:20] cg-vwn446.simple-grid.lan
[2026-02-02 07:38:20] apptainer works
[2026-02-02 07:38:20] Set ATHENA_PROC_NUMBER=8
[2026-02-02 07:38:20] Set ATHENA_CORE_NUMBER=8
[2026-02-02 07:38:20] Starting ATLAS job with PandaID=6992587835
[2026-02-02 07:38:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 11:52:36]  *** The last 200 lines of the pilot log: ***
[2026-02-02 11:52:36] 2026-02-02 10:51:42,632 | INFO     | total number of processed events: 400 (read)
[2026-02-02 11:52:36] 2026-02-02 10:51:42,634 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6992587835/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 11:52:36] 2026-02-02 10:51:42,635 | INFO     | extracted standard info from prmon json
[2026-02-02 11:52:36] 2026-02-02 10:51:42,635 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 11:52:36] 2026-02-02 10:51:42,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 11:52:36] 2026-02-02 10:51:42,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 11:52:36] 2026-02-02 10:51:42,635 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 11:52:36] 2026-02-02 10:51:42,641 | INFO     | fitting pss+swap vs Time
[2026-02-02 11:52:36] 2026-02-02 10:51:42,641 | INFO     | sum of square deviations: 4180243959.5
[2026-02-02 11:52:36] 2026-02-02 10:51:42,643 | INFO     | sum of deviations: 73712422600.50002
[2026-02-02 11:52:36] 2026-02-02 10:51:42,644 | INFO     | mean x: 1770022225.5
[2026-02-02 11:52:36] 2026-02-02 10:51:42,644 | INFO     | mean y: 2458653.9453781513
[2026-02-02 11:52:36] 2026-02-02 10:51:42,644 | INFO     | intersect: -31209266681.324146
[2026-02-02 11:52:36] 2026-02-02 10:51:42,644 | INFO     | chi2: 7.178426830992904
[2026-02-02 11:52:36] 2026-02-02 10:51:42,645 | INFO     | sum of square deviations: 3922276332.0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,647 | INFO     | sum of deviations: 87848491504.99998
[2026-02-02 11:52:36] 2026-02-02 10:51:42,647 | INFO     | mean x: 1770022073.0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,647 | INFO     | mean y: 2466850.8068669527
[2026-02-02 11:52:36] 2026-02-02 10:51:42,647 | INFO     | intersect: -39641289958.21822
[2026-02-02 11:52:36] 2026-02-02 10:51:42,648 | INFO     | chi2: 6.47296689496586
[2026-02-02 11:52:36] 2026-02-02 10:51:42,648 | INFO     | current chi2=6.47296689496586 (change=9.827500546236898 %)
[2026-02-02 11:52:36] 2026-02-02 10:51:42,648 | INFO     | right removable region: 232
[2026-02-02 11:52:36] 2026-02-02 10:51:42,648 | INFO     | sum of square deviations: 3922276332.0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,650 | INFO     | sum of deviations: -8215884918.000002
[2026-02-02 11:52:36] 2026-02-02 10:51:42,651 | INFO     | mean x: 1770022378.0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,651 | INFO     | mean y: 2507044.9699570816
[2026-02-02 11:52:36] 2026-02-02 10:51:42,651 | INFO     | intersect: 3710124491.830837
[2026-02-02 11:52:36] 2026-02-02 10:51:42,651 | INFO     | chi2: 2.4340006600781146
[2026-02-02 11:52:36] 2026-02-02 10:51:42,651 | INFO     | current chi2=2.4340006600781146 (change=66.09284015309174 %)
[2026-02-02 11:52:36] 2026-02-02 10:51:42,652 | INFO     | sum of square deviations: 3675146117.0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,653 | INFO     | sum of deviations: -49331344983.49997
[2026-02-02 11:52:36] 2026-02-02 10:51:42,654 | INFO     | mean x: 1770022530.5
[2026-02-02 11:52:36] 2026-02-02 10:51:42,654 | INFO     | mean y: 2532264.4166666665
[2026-02-02 11:52:36] 2026-02-02 10:51:42,654 | INFO     | intersect: 23761476616.795216
[2026-02-02 11:52:36] 2026-02-02 10:51:42,654 | INFO     | chi2: 1.0053552227377882
[2026-02-02 11:52:36] 2026-02-02 10:51:42,654 | INFO     | current chi2=1.0053552227377882 (change=58.69535948665177 %)
[2026-02-02 11:52:36] 2026-02-02 10:51:42,655 | INFO     | sum of square deviations: 3438620752.0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,657 | INFO     | sum of deviations: -48712138467.0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,657 | INFO     | mean x: 1770022683.0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,657 | INFO     | mean y: 2531823.5022421526
[2026-02-02 11:52:36] 2026-02-02 10:51:42,657 | INFO     | intersect: 25077000990.792038
[2026-02-02 11:52:36] 2026-02-02 10:51:42,657 | INFO     | chi2: 0.9846863880412017
[2026-02-02 11:52:36] 2026-02-02 10:51:42,657 | INFO     | current chi2=0.9846863880412017 (change=2.0558738074987133 %)
[2026-02-02 11:52:36] 2026-02-02 10:51:42,658 | INFO     | left removable region: 30
[2026-02-02 11:52:36] 2026-02-02 10:51:42,658 | INFO     | sum of square deviations: 2555770710.5
[2026-02-02 11:52:36] 2026-02-02 10:51:42,664 | INFO     | sum of deviations: -12371988524.000004
[2026-02-02 11:52:36] 2026-02-02 10:51:42,664 | INFO     | mean x: 1770022957.5
[2026-02-02 11:52:36] 2026-02-02 10:51:42,664 | INFO     | mean y: 2526996.712871287
[2026-02-02 11:52:36] 2026-02-02 10:51:42,664 | INFO     | intersect: 8570863595.703937
[2026-02-02 11:52:36] 2026-02-02 10:51:42,669 | INFO     | chi2: 0.135134574322151
[2026-02-02 11:52:36] 2026-02-02 10:51:42,669 | INFO     | current memory leak: -4.84 B/s (using 202 data points, chi2=0.14)
[2026-02-02 11:52:36] 2026-02-02 10:51:42,670 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-02 11:52:36] 2026-02-02 10:51:42,670 | INFO     | ..............................
[2026-02-02 11:52:36] 2026-02-02 10:51:42,670 | INFO     | . Timing measurements:
[2026-02-02 11:52:36] 2026-02-02 10:51:42,670 | INFO     | . get job = 0 s
[2026-02-02 11:52:36] 2026-02-02 10:51:42,670 | INFO     | . initial setup = 116 s
[2026-02-02 11:52:36] 2026-02-02 10:51:42,670 | INFO     | . payload setup = 147 s
[2026-02-02 11:52:36] 2026-02-02 10:51:42,670 | INFO     | . stage-in = 0 s
[2026-02-02 11:52:36] 2026-02-02 10:51:42,670 | INFO     | . payload execution = 14629 s
[2026-02-02 11:52:36] 2026-02-02 10:51:42,671 | INFO     | . stage-out = 3 s
[2026-02-02 11:52:36] 2026-02-02 10:51:42,671 | INFO     | . log creation = 1 s
[2026-02-02 11:52:36] 2026-02-02 10:51:42,671 | INFO     | ..............................
[2026-02-02 11:52:36] 2026-02-02 10:51:42,794 | INFO     | 
[2026-02-02 11:52:36] 2026-02-02 10:51:42,794 | INFO     | job summary report
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | --------------------------------------------------
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | PanDA job id: 6992587835
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | task id: 48310749
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | errors: (none)
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | pilot state: finished 
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | transexitcode: 0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | exeerrorcode: 0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | exeerrordiag: 
[2026-02-02 11:52:36] 2026-02-02 10:51:42,795 | INFO     | exitcode: 0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,796 | INFO     | exitmsg: OK
[2026-02-02 11:52:36] 2026-02-02 10:51:42,796 | INFO     | cpuconsumptiontime: 53404 s
[2026-02-02 11:52:36] 2026-02-02 10:51:42,796 | INFO     | nevents: 400
[2026-02-02 11:52:36] 2026-02-02 10:51:42,796 | INFO     | neventsw: 0
[2026-02-02 11:52:36] 2026-02-02 10:51:42,796 | INFO     | pid: 3416
[2026-02-02 11:52:36] 2026-02-02 10:51:42,796 | INFO     | pgrp: 3416
[2026-02-02 11:52:36] 2026-02-02 10:51:42,796 | INFO     | corecount: 8
[2026-02-02 11:52:36] 2026-02-02 10:51:42,796 | INFO     | event service: False
[2026-02-02 11:52:36] 2026-02-02 10:51:42,797 | INFO     | sizes: {0: 2277790, 1: 2278191, 2: 2278251, 12: 2278279, 14781: 2309163, 14785: 2318161, 14786: 2318345, 14789: 2318539}
[2026-02-02 11:52:36] 2026-02-02 10:51:42,797 | INFO     | --------------------------------------------------
[2026-02-02 11:52:36] 2026-02-02 10:51:42,797 | INFO     | 
[2026-02-02 11:52:36] 2026-02-02 10:51:42,797 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-02 11:52:36] 2026-02-02 10:51:43,224 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,225 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,225 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,225 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,226 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,226 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,226 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,226 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,227 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 11:52:36] 2026-02-02 10:51:43,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,227 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 11:52:36] 2026-02-02 10:51:43,227 | INFO     | job 6992587835 has completed (purged errors)
[2026-02-02 11:52:36] 2026-02-02 10:51:43,227 | INFO     | overall cleanup function is called
[2026-02-02 11:52:36] 2026-02-02 10:51:44,236 | INFO     | --- collectZombieJob: --- 10, [3416]
[2026-02-02 11:52:36] 2026-02-02 10:51:44,237 | INFO     | zombie collector waiting for pid 3416
[2026-02-02 11:52:36] 2026-02-02 10:51:44,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 11:52:36] 2026-02-02 10:51:44,237 | INFO     | collected zombie processes
[2026-02-02 11:52:36] 2026-02-02 10:51:44,237 | INFO     | will attempt to kill all subprocesses of pid=3416
[2026-02-02 11:52:36] 2026-02-02 10:51:44,311 | INFO     | process IDs to be killed: [3416] (in reverse order)
[2026-02-02 11:52:36] 2026-02-02 10:51:45,314 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 11:52:36] 2026-02-02 10:51:45,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 11:52:36] 2026-02-02 10:51:45,317 | INFO     | did not find any defunct processes belonging to 3416
[2026-02-02 11:52:36] 2026-02-02 10:51:45,319 | INFO     | did not find any defunct processes belonging to 3416
[2026-02-02 11:52:36] 2026-02-02 10:51:45,319 | INFO     | ready for new job
[2026-02-02 11:52:36] 2026-02-02 10:51:45,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 11:52:36] 2026-02-02 10:51:45,322 | INFO     | **************************************
[2026-02-02 11:52:36] 2026-02-02 10:51:45,322 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 11:52:36] 2026-02-02 10:51:45,322 | INFO     | **************************************
[2026-02-02 11:52:36] 2026-02-02 10:51:45,322 | INFO     | 
[2026-02-02 11:52:36] 2026-02-02 10:51:45,326 | INFO     | pilot is running in a VM
[2026-02-02 11:52:36] 2026-02-02 10:51:45,326 | INFO     | architecture information:
[2026-02-02 11:52:36] 2026-02-02 10:51:45,335 | INFO     | executing command: cat /etc/os-release
[2026-02-02 11:52:36] 2026-02-02 10:51:45,607 | INFO     | cat /etc/os-release:
[2026-02-02 11:52:36] NAME="CentOS Linux"
[2026-02-02 11:52:36] VERSION="7 (Core)"
[2026-02-02 11:52:36] ID="centos"
[2026-02-02 11:52:36] ID_LIKE="rhel fedora"
[2026-02-02 11:52:36] VERSION_ID="7"
[2026-02-02 11:52:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 11:52:36] ANSI_COLOR="0;31"
[2026-02-02 11:52:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 11:52:36] HOME_URL="https://www.centos.org/"
[2026-02-02 11:52:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 11:52:36] 
[2026-02-02 11:52:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 11:52:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 11:52:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 11:52:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 11:52:36] 
[2026-02-02 11:52:36] 2026-02-02 10:51:45,607 | INFO     | **************************************
[2026-02-02 11:52:36] 2026-02-02 10:51:46,111 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-02 11:52:36] 2026-02-02 10:51:46,370 | INFO     | sufficient remaining disk space (495309553664 B)
[2026-02-02 11:52:36] 2026-02-02 10:51:46,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 11:52:36] 2026-02-02 10:51:46,371 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 11:52:36] 2026-02-02 10:51:46,371 | INFO     | update_server=False
[2026-02-02 11:52:36] 2026-02-02 10:51:46,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 11:52:36] 2026-02-02 10:51:46,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 11:52:36] 2026-02-02 10:51:46,395 | INFO     | all data control threads have been joined
[2026-02-02 11:52:36] 2026-02-02 10:51:46,705 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 11:52:36] 2026-02-02 10:51:46,706 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 11:52:36] 2026-02-02 10:51:46,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 11:52:36] 2026-02-02 10:51:46,706 | INFO     | will abort loop
[2026-02-02 11:52:36] 2026-02-02 10:51:47,218 | INFO     | all job control threads have been joined
[2026-02-02 11:52:36] 2026-02-02 10:51:47,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 11:52:36] 2026-02-02 10:51:47,377 | INFO     | [job] retrieve thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:47,402 | INFO     | [data] control thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:47,413 | INFO     | [payload] validate_post thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:47,652 | INFO     | all payload control threads have been joined
[2026-02-02 11:52:36] 2026-02-02 10:51:47,712 | INFO     | [job] job monitor thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:47,733 | INFO     | [data] copytool_in thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:47,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 11:52:36] 2026-02-02 10:51:47,828 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:47,983 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:48,099 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:48,213 | INFO     | [payload] failed_post thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:48,225 | INFO     | [job] control thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:48,659 | INFO     | [payload] control thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:48,815 | INFO     | [job] queue monitor thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:48,831 | INFO     | [job] validate thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:48,845 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:49,247 | INFO     | [data] copytool_out thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:51:50,381 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 11:52:36] 2026-02-02 10:52:15,060 | INFO     | PID=31323 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 11:52:36] 2026-02-02 10:52:15,060 | INFO     | .. there are 2 such processes running
[2026-02-02 11:52:36] 2026-02-02 10:52:15,061 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 11:52:36] 2026-02-02 10:52:15,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 11:52:36] 2026-02-02 10:52:15,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 11:52:36] 2026-02-02 10:52:26,449 | INFO     | [monitor] cgroup control has ended
[2026-02-02 11:52:36] 2026-02-02 10:52:26,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664576845632)>', '<ExcThread(monitor, started 139663545202432)>']
[2026-02-02 11:52:36] 2026-02-02 10:52:27,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 11:52:36] 2026-02-02 10:52:27,134 | INFO     | [monitor] control thread has ended
[2026-02-02 11:52:36] 2026-02-02 10:52:31,589 | INFO     | all workflow threads have been joined
[2026-02-02 11:52:36] 2026-02-02 10:52:31,589 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 11:52:36] 2026-02-02 10:52:31,589 | INFO     | traces error code: 0
[2026-02-02 11:52:36] 2026-02-02 10:52:31,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 11:52:36] 2026-02-02 10:52:31,962 [wrapper] ==== pilot stdout END ====
[2026-02-02 11:52:36] 2026-02-02 10:52:32,070 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 11:52:36] 2026-02-02 10:52:32,149 [wrapper] pilotpid: 31323
[2026-02-02 11:52:36] 2026-02-02 10:52:32,230 [wrapper] Pilot exit status: 0
[2026-02-02 11:52:36] 2026-02-02 10:52:32,698 [wrapper] pandaids: 6992587835
[2026-02-02 11:52:36] 2026-02-02 10:52:33,639 [wrapper] cleanup supervisor_pilot 10043 31324
[2026-02-02 11:52:36] 2026-02-02 10:52:33,734 [wrapper] Test setup, not cleaning
[2026-02-02 11:52:36] 2026-02-02 10:52:33,836 [wrapper] apfmon messages muted
[2026-02-02 11:52:36] 2026-02-02 10:52:33,942 [wrapper] ==== wrapper stdout END ====
[2026-02-02 11:52:36] 2026-02-02 10:52:34,042 [wrapper] ==== wrapper stderr END ====
[2026-02-02 11:52:36]  *** Error codes and diagnostics ***
[2026-02-02 11:52:36]     "exeErrorCode": 0,
[2026-02-02 11:52:36]     "exeErrorDiag": "",
[2026-02-02 11:52:36]     "pilotErrorCode": 0,
[2026-02-02 11:52:36]     "pilotErrorDiag": "",
[2026-02-02 11:52:36]  *** Listing of results directory ***
[2026-02-02 11:52:36] total 671476
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc    584422 Feb  1 18:33 pilot3.tar.gz
[2026-02-02 11:52:36] -rwx------. 1 boinc boinc     36322 Feb  1 18:34 runpilot2-wrapper.sh
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc      5111 Feb  1 18:35 queuedata.json
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc       100 Feb  2 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 11:52:36] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 07:38 run_atlas
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc       105 Feb  2 07:38 job.xml
[2026-02-02 11:52:36] -rw-r--r--. 2 boinc boinc 494289930 Feb  2 07:38 EVNT.48310747._000068.pool.root.1
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc      6392 Feb  2 07:38 init_data.xml
[2026-02-02 11:52:36] -rw-r--r--. 2 boinc boinc     15845 Feb  2 07:38 start_atlas.sh
[2026-02-02 11:52:36] drwxrwx--x. 2 boinc boinc        68 Feb  2 07:38 shared
[2026-02-02 11:52:36] -rw-r--r--. 2 boinc boinc    597757 Feb  2 07:38 input.tar.gz
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc         0 Feb  2 07:38 boinc_lockfile
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc      2523 Feb  2 07:38 pandaJob.out
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc       415 Feb  2 07:44 workernode_map.json
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc   1009823 Feb  2 07:45 agis_schedconf.cvmfs.json
[2026-02-02 11:52:36] drwx------. 5 boinc boinc      4096 Feb  2 07:45 pilot3
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc 184212441 Feb  2 11:50 HITS.48310749._003391.pool.root.1
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc       531 Feb  2 11:50 boinc_task_state.xml
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc      1010 Feb  2 11:51 memory_monitor_summary.json
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc   1511668 Feb  2 11:51 agis_ddmendpoints.agis.ALL.json
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc    500545 Feb  2 11:51 log.48310749._003391.job.log.tgz.1
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc      6310 Feb  2 11:51 heartbeat.json
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc      8192 Feb  2 11:52 boinc_mmap_file
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc        28 Feb  2 11:52 wrapper_checkpoint.txt
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc        95 Feb  2 11:52 pilot_heartbeat.json
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc      5066 Feb  2 11:52 pilotlog.txt
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc   2078065 Feb  2 11:52 log.48310749._003391.job.log.1
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc       357 Feb  2 11:52 output.list
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc       620 Feb  2 11:52 runtime_log
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc   2600960 Feb  2 11:52 result.tar.gz
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc      8816 Feb  2 11:52 runtime_log.err
[2026-02-02 11:52:36] -rw-------. 1 boinc boinc       655 Feb  2 11:52 0aIKDmLWq68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmolQKDm8M0jin.diag
[2026-02-02 11:52:36] -rw-r--r--. 1 boinc boinc     20717 Feb  2 11:52 stderr.txt
[2026-02-02 11:52:36] HITS file was successfully produced:
[2026-02-02 11:52:37] -rw-------. 1 boinc boinc 184212441 Feb  2 11:50 shared/HITS.pool.root.1
[2026-02-02 11:52:37]  *** Contents of shared directory: ***
[2026-02-02 11:52:37] total 665744
[2026-02-02 11:52:37] -rw-r--r--. 2 boinc boinc 494289930 Feb  2 07:38 ATLAS.root_0
[2026-02-02 11:52:37] -rw-r--r--. 2 boinc boinc     15845 Feb  2 07:38 start_atlas.sh
[2026-02-02 11:52:37] -rw-r--r--. 2 boinc boinc    597757 Feb  2 07:38 input.tar.gz
[2026-02-02 11:52:37] -rw-------. 1 boinc boinc 184212441 Feb  2 11:50 HITS.pool.root.1
[2026-02-02 11:52:37] -rw-------. 1 boinc boinc   2600960 Feb  2 11:52 result.tar.gz
11:52:38 (27226): run_atlas exited; CPU time 53571.273753
11:52:38 (27226): called boinc_finish(0)

</stderr_txt>
]]>

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