Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:31:49 (1259793): wrapper (7.7.26015): starting
15:31:49 (1259793): wrapper: running run_atlas (--nthreads 4)
[2026-02-01 15:31:49] Arguments: --nthreads 4
[2026-02-01 15:31:49] Threads: 4
[2026-02-01 15:31:49] Checking for CVMFS
[2026-02-01 15:32:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 15:33:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 15:33:18] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 15:33:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 15:33:18] 2.12.6.0 1260262 1 25320 155763 3 1 3045355 4194305 0 130560 0 0 0.000 1336 31 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-01 15:33:18] CVMFS is ok
[2026-02-01 15:33:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 15:33:18] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-01 15:33:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-01 15:33:18] Further information can be found at the LHC@home message board.
[2026-02-01 15:33:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 15:33:18] Checking for apptainer binary...
[2026-02-01 15:33:18] apptainer is not installed, using version from CVMFS
[2026-02-01 15:33:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 15:33:21] Kthanid-Penguin
[2026-02-01 15:33:21] apptainer works
[2026-02-01 15:33:21] Set ATHENA_PROC_NUMBER=4
[2026-02-01 15:33:21] Set ATHENA_CORE_NUMBER=4
[2026-02-01 15:33:21] Starting ATLAS job with PandaID=6996178686
[2026-02-01 15:33:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 17:39:47]  *** The last 200 lines of the pilot log: ***
[2026-02-01 17:39:47] 2026-02-01 23:38:40,243 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,243 | INFO     | log transfer has been attempted: DONE
[2026-02-01 17:39:47] 2026-02-01 23:38:40,243 | INFO     | job 6996178686 has finished - writing final server update
[2026-02-01 17:39:47] 2026-02-01 23:38:40,244 | INFO     | total number of processed events: 400 (read)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,245 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6996178686/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,245 | INFO     | extracted standard info from prmon json
[2026-02-01 17:39:47] 2026-02-01 23:38:40,245 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 17:39:47] 2026-02-01 23:38:40,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 17:39:47] 2026-02-01 23:38:40,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 17:39:47] 2026-02-01 23:38:40,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 17:39:47] 2026-02-01 23:38:40,247 | INFO     | fitting pss+swap vs Time
[2026-02-01 17:39:47] 2026-02-01 23:38:40,247 | INFO     | sum of square deviations: 496597218.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,247 | INFO     | sum of deviations: 18913652130.99999
[2026-02-01 17:39:47] 2026-02-01 23:38:40,247 | INFO     | mean x: 1769985462.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,247 | INFO     | mean y: 2349705.752136752
[2026-02-01 17:39:47] 2026-02-01 23:38:40,247 | INFO     | intersect: -67410209389.96816
[2026-02-01 17:39:47] 2026-02-01 23:38:40,247 | INFO     | chi2: 4.714096629347996
[2026-02-01 17:39:47] 2026-02-01 23:38:40,247 | INFO     | sum of square deviations: 435610028.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | sum of deviations: 18829371176.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | mean x: 1769985309.5
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | mean y: 2349494.875
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | intersect: -76505784446.98811
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | chi2: 4.732303350737103
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | current chi2=4.732303350737103 (change=-0.38621867179727054 %)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | right removable region: 111
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | sum of square deviations: 435610028.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | sum of deviations: -14149212787.999998
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | mean x: 1769985614.5
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | mean y: 2432019.2321428573
[2026-02-01 17:39:47] 2026-02-01 23:38:40,248 | INFO     | intersect: 57493998974.75557
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | chi2: 0.8312941564224067
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | current chi2=0.8312941564224067 (change=82.36578030142367 %)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | sum of square deviations: 379832238.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | sum of deviations: -23444487033.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | mean x: 1769985767.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | mean y: 2456897.23364486
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | intersect: 109251762805.34895
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | chi2: 0.23855073512850944
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | current chi2=0.23855073512850944 (change=71.30369156507167 %)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | sum of square deviations: 329031285.5
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | sum of deviations: -22450607018.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,249 | INFO     | mean x: 1769985919.5
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | mean y: 2453713.156862745
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | intersect: 120772909463.90001
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | chi2: 0.20396043533681488
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | current chi2=0.20396043533681488 (change=14.500185787757246 %)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | left removable region: 30
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | sum of square deviations: 164765880.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | sum of deviations: -7548821492.000001
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | mean x: 1769986194.0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | mean y: 2404756.765432099
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | intersect: 81095103207.50343
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | chi2: 0.13692430066552222
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | current memory leak: -45.82 B/s (using 81 data points, chi2=0.14)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,250 | INFO     | could have reported an average CPU frequency of 4112 MHz (8 samples)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | ..............................
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | . Timing measurements:
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | . get job = 0 s
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | . initial setup = 12 s
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | . payload setup = 37 s
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | . stage-in = 30 s
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | . payload execution = 7131 s
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | . stage-out = 60 s
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | . log creation = 0 s
[2026-02-01 17:39:47] 2026-02-01 23:38:40,251 | INFO     | ..............................
[2026-02-01 17:39:47] 2026-02-01 23:38:40,272 | INFO     | time since job start (7271s) is within the limit (349056.0s)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | 
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | job summary report
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | --------------------------------------------------
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | PanDA job id: 6996178686
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | task id: 48317931
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | errors: (none)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | pilot state: finished 
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | transexitcode: 0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | exeerrorcode: 0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,293 | INFO     | exeerrordiag: 
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | exitcode: 0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | exitmsg: OK
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | cpuconsumptiontime: 25162 s
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | nevents: 400
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | neventsw: 0
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | pid: 1270658
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | pgrp: 1270658
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | corecount: 4
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | event service: False
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | sizes: {0: 2277964, 1: 2277964, 11: 2277992, 22: 2278020, 31: 2278254, 32: 2278282, 7172: 2305703, 7233: 2314909, 7236: 2314965, 7238: 2314989}
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | --------------------------------------------------
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | 
[2026-02-01 17:39:47] 2026-02-01 23:38:40,294 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-02-01 17:39:47] 2026-02-01 23:38:40,311 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 17:39:47] 2026-02-01 23:38:40,312 | INFO     | job 6996178686 has completed (purged errors)
[2026-02-01 17:39:47] 2026-02-01 23:38:40,313 | INFO     | overall cleanup function is called
[2026-02-01 17:39:47] 2026-02-01 23:38:41,319 | INFO     | --- collectZombieJob: --- 10, [1270658]
[2026-02-01 17:39:47] 2026-02-01 23:38:41,320 | INFO     | zombie collector waiting for pid 1270658
[2026-02-01 17:39:47] 2026-02-01 23:38:41,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 17:39:47] 2026-02-01 23:38:41,320 | INFO     | collected zombie processes
[2026-02-01 17:39:47] 2026-02-01 23:38:41,320 | INFO     | will attempt to kill all subprocesses of pid=1270658
[2026-02-01 17:39:47] 2026-02-01 23:38:41,388 | INFO     | process IDs to be killed: [1270658] (in reverse order)
[2026-02-01 17:39:47] 2026-02-01 23:38:41,441 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 17:39:47] 2026-02-01 23:38:41,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 17:39:47] 2026-02-01 23:38:41,445 | INFO     | did not find any defunct processes belonging to 1270658
[2026-02-01 17:39:47] 2026-02-01 23:38:41,448 | INFO     | did not find any defunct processes belonging to 1270658
[2026-02-01 17:39:47] 2026-02-01 23:38:41,448 | INFO     | ready for new job
[2026-02-01 17:39:47] 2026-02-01 23:38:41,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 17:39:47] 2026-02-01 23:38:41,450 | INFO     | **************************************
[2026-02-01 17:39:47] 2026-02-01 23:38:41,450 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 17:39:47] 2026-02-01 23:38:41,450 | INFO     | **************************************
[2026-02-01 17:39:47] 2026-02-01 23:38:41,450 | INFO     | 
[2026-02-01 17:39:47] 2026-02-01 23:38:41,451 | INFO     | architecture information:
[2026-02-01 17:39:47] 2026-02-01 23:38:41,451 | INFO     | executing command: cat /etc/os-release
[2026-02-01 17:39:47] 2026-02-01 23:38:41,465 | INFO     | cat /etc/os-release:
[2026-02-01 17:39:47] NAME="CentOS Linux"
[2026-02-01 17:39:47] VERSION="7 (Core)"
[2026-02-01 17:39:47] ID="centos"
[2026-02-01 17:39:47] ID_LIKE="rhel fedora"
[2026-02-01 17:39:47] VERSION_ID="7"
[2026-02-01 17:39:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 17:39:47] ANSI_COLOR="0;31"
[2026-02-01 17:39:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 17:39:47] HOME_URL="https://www.centos.org/"
[2026-02-01 17:39:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 17:39:47] 
[2026-02-01 17:39:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 17:39:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 17:39:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 17:39:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 17:39:47] 
[2026-02-01 17:39:47] 2026-02-01 23:38:41,465 | INFO     | **************************************
[2026-02-01 17:39:47] 2026-02-01 23:38:41,968 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-02-01 17:39:47] 2026-02-01 23:38:41,986 | INFO     | sufficient remaining disk space (669269360640 B)
[2026-02-01 17:39:47] 2026-02-01 23:38:41,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 17:39:47] 2026-02-01 23:38:41,986 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 17:39:47] 2026-02-01 23:38:41,986 | INFO     | update_server=False
[2026-02-01 17:39:47] 2026-02-01 23:38:41,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 17:39:47] 2026-02-01 23:38:41,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:39:47] 2026-02-01 23:38:41,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:39:47] 2026-02-01 23:38:41,987 | INFO     | aborting loop
[2026-02-01 17:39:47] 2026-02-01 23:38:41,987 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-01 17:39:47] 2026-02-01 23:38:41,987 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 17:39:47] 2026-02-01 23:38:41,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 17:39:47] 2026-02-01 23:38:41,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 17:39:47] 2026-02-01 23:38:42,062 | INFO     | all payload control threads have been joined
[2026-02-01 17:39:47] 2026-02-01 23:38:42,137 | INFO     | all data control threads have been joined
[2026-02-01 17:39:47] 2026-02-01 23:38:42,779 | INFO     | all job control threads have been joined
[2026-02-01 17:39:47] 2026-02-01 23:38:42,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 17:39:47] 2026-02-01 23:38:42,992 | INFO     | [job] retrieve thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:42,993 | INFO     | [job] queue monitor thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:42,993 | INFO     | [job] job monitor thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:43,066 | INFO     | [payload] control thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:43,142 | INFO     | [data] control thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:43,228 | INFO     | [data] copytool_in thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:43,261 | INFO     | [payload] failed_post thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:43,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 17:39:47] 2026-02-01 23:38:43,784 | INFO     | [job] control thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:43,910 | INFO     | [job] validate thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:43,993 | INFO     | [payload] validate_post thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:44,061 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:44,115 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:44,146 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:44,240 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:44,849 | INFO     | [data] copytool_out thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:38:47,467 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 17:39:47] 2026-02-01 23:39:40,735 | INFO     | [monitor] cgroup control has ended
[2026-02-01 17:39:47] 2026-02-01 23:39:41,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136605177341760)>', '<ExcThread(monitor, started 136604471498496)>']
[2026-02-01 17:39:47] 2026-02-01 23:39:42,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 17:39:47] 2026-02-01 23:39:42,261 | INFO     | [monitor] control thread has ended
[2026-02-01 17:39:47] 2026-02-01 23:39:46,765 | INFO     | all workflow threads have been joined
[2026-02-01 17:39:47] 2026-02-01 23:39:46,766 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 17:39:47] 2026-02-01 23:39:46,766 | INFO     | traces error code: 0
[2026-02-01 17:39:47] 2026-02-01 23:39:46,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 17:39:47] 2026-02-01 23:39:46,865 [wrapper] ==== pilot stdout END ====
[2026-02-01 17:39:47] 2026-02-01 23:39:46,867 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 17:39:47] 2026-02-01 23:39:46,870 [wrapper] pilotpid: 1265728
[2026-02-01 17:39:47] 2026-02-01 23:39:46,873 [wrapper] Pilot exit status: 0
[2026-02-01 17:39:47] 2026-02-01 23:39:47,211 [wrapper] pandaids: 6996178686
[2026-02-01 17:39:47] 2026-02-01 23:39:47,247 [wrapper] cleanup supervisor_pilot 1312231 1265729
[2026-02-01 17:39:47] 2026-02-01 23:39:47,251 [wrapper] Test setup, not cleaning
[2026-02-01 17:39:47] 2026-02-01 23:39:47,255 [wrapper] apfmon messages muted
[2026-02-01 17:39:47] 2026-02-01 23:39:47,258 [wrapper] ==== wrapper stdout END ====
[2026-02-01 17:39:47] 2026-02-01 23:39:47,261 [wrapper] ==== wrapper stderr END ====
[2026-02-01 17:39:47]  *** Error codes and diagnostics ***
[2026-02-01 17:39:47]     "exeErrorCode": 0,
[2026-02-01 17:39:47]     "exeErrorDiag": "",
[2026-02-01 17:39:47]     "pilotErrorCode": 0,
[2026-02-01 17:39:47]     "pilotErrorDiag": "",
[2026-02-01 17:39:47]  *** Listing of results directory ***
[2026-02-01 17:39:47] total 664636
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc    584422 Feb  1 11:33 pilot3.tar.gz
[2026-02-01 17:39:47] -rwx------ 1 boinc boinc     36322 Feb  1 11:34 runpilot2-wrapper.sh
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc      5111 Feb  1 11:35 queuedata.json
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc       100 Feb  1 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 17:39:47] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 15:31 run_atlas
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc       105 Feb  1 15:31 job.xml
[2026-02-01 17:39:47] -rw-r--r-- 2 boinc boinc 493577093 Feb  1 15:31 EVNT.48317929._000206.pool.root.1
[2026-02-01 17:39:47] -rw-r--r-- 2 boinc boinc     15845 Feb  1 15:31 start_atlas.sh
[2026-02-01 17:39:47] drwxrwx--x 2 boinc boinc      4096 Feb  1 15:31 shared
[2026-02-01 17:39:47] -rw-r--r-- 2 boinc boinc    597773 Feb  1 15:31 input.tar.gz
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc      9387 Feb  1 15:31 init_data.xml
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc         0 Feb  1 15:31 boinc_setup_complete
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc         0 Feb  1 15:31 boinc_lockfile
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc      2512 Feb  1 15:33 pandaJob.out
[2026-02-01 17:39:47] -rw------- 1 boinc boinc   1009765 Feb  1 15:37 agis_schedconf.cvmfs.json
[2026-02-01 17:39:47] -rw------- 1 boinc boinc   1511668 Feb  1 15:37 agis_ddmendpoints.agis.ALL.json
[2026-02-01 17:39:47] -rw------- 1 boinc boinc       418 Feb  1 15:37 workernode_map.json
[2026-02-01 17:39:47] drwx------ 5 boinc boinc      4096 Feb  1 15:37 pilot3
[2026-02-01 17:39:47] -rw------- 1 boinc boinc 180351149 Feb  1 17:37 HITS.48317931._011732.pool.root.1
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc       530 Feb  1 17:37 boinc_task_state.xml
[2026-02-01 17:39:47] -rw------- 1 boinc boinc      1018 Feb  1 17:37 memory_monitor_summary.json
[2026-02-01 17:39:47] -rw------- 1 boinc boinc    311604 Feb  1 17:38 log.48317931._011732.job.log.tgz.1
[2026-02-01 17:39:47] -rw------- 1 boinc boinc        95 Feb  1 17:38 pilot_heartbeat.json
[2026-02-01 17:39:47] -rw------- 1 boinc boinc      6294 Feb  1 17:38 heartbeat.json
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc      8192 Feb  1 17:39 boinc_mmap_file
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc        27 Feb  1 17:39 wrapper_checkpoint.txt
[2026-02-01 17:39:47] -rw------- 1 boinc boinc      4556 Feb  1 17:39 pilotlog.txt
[2026-02-01 17:39:47] -rw------- 1 boinc boinc   1044172 Feb  1 17:39 log.48317931._011732.job.log.1
[2026-02-01 17:39:47] -rw------- 1 boinc boinc       357 Feb  1 17:39 output.list
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc       620 Feb  1 17:39 runtime_log
[2026-02-01 17:39:47] -rw------- 1 boinc boinc   1372160 Feb  1 17:39 result.tar.gz
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc      8937 Feb  1 17:39 runtime_log.err
[2026-02-01 17:39:47] -rw------- 1 boinc boinc       657 Feb  1 17:39 3ASNDmKWq68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4kQKDmMkRy0m.diag
[2026-02-01 17:39:47] -rw-r--r-- 1 boinc boinc     21128 Feb  1 17:39 stderr.txt
[2026-02-01 17:39:47] HITS file was successfully produced:
[2026-02-01 17:39:47] -rw------- 1 boinc boinc 180351149 Feb  1 17:37 shared/HITS.pool.root.1
[2026-02-01 17:39:47]  *** Contents of shared directory: ***
[2026-02-01 17:39:47] total 660088
[2026-02-01 17:39:47] -rw-r--r-- 2 boinc boinc 493577093 Feb  1 15:31 ATLAS.root_0
[2026-02-01 17:39:47] -rw-r--r-- 2 boinc boinc     15845 Feb  1 15:31 start_atlas.sh
[2026-02-01 17:39:47] -rw-r--r-- 2 boinc boinc    597773 Feb  1 15:31 input.tar.gz
[2026-02-01 17:39:47] -rw------- 1 boinc boinc 180351149 Feb  1 17:37 HITS.pool.root.1
[2026-02-01 17:39:47] -rw------- 1 boinc boinc   1372160 Feb  1 17:39 result.tar.gz
17:39:49 (1259793): run_atlas exited; CPU time 25169.130733
17:39:49 (1259793): called boinc_finish(0)

</stderr_txt>
]]>

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