Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:10:40 (622044): wrapper (7.7.26015): starting
05:10:40 (622044): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 05:10:40] Arguments: --nthreads 4
[2026-02-02 05:10:40] Threads: 4
[2026-02-02 05:10:40] Checking for CVMFS
[2026-02-02 05:10:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 05:10:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 05:10:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 05:10:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 05:10:41] 2.13.1.0 3933141 6459 93760 155772 3 188 7847915 10240001 1822 130560 0 12408128 99.997 215578 289 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-02 05:10:41] CVMFS is ok
[2026-02-02 05:10:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 05:10:41] Checking for apptainer binary...
[2026-02-02 05:10:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 05:10:41] Running /usr/bin/apptainer --version
[2026-02-02 05:10:41] apptainer version 1.4.5
[2026-02-02 05:10:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 05:10:41] julianvlneu
[2026-02-02 05:10:41] apptainer works
[2026-02-02 05:10:41] Set ATHENA_PROC_NUMBER=4
[2026-02-02 05:10:41] Set ATHENA_CORE_NUMBER=4
[2026-02-02 05:10:41] Starting ATLAS job with PandaID=6996115147
[2026-02-02 05:10:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 06:33:26]  *** The last 200 lines of the pilot log: ***
[2026-02-02 06:33:26]  filetype=log
[2026-02-02 06:33:26]  guid=d4766d1a-a770-4fe5-9016-63672c692084
[2026-02-02 06:33:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 06:33:26]  is_altstaged=None
[2026-02-02 06:33:26]  is_tar=False
[2026-02-02 06:33:26]  lfn=log.48431096._002078.job.log.tgz.1
[2026-02-02 06:33:26]  mtime=0
[2026-02-02 06:33:26]  protocol_id=None
[2026-02-02 06:33:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 06:33:26]  replicas=None
[2026-02-02 06:33:26]  scope=mc23_13p6TeV
[2026-02-02 06:33:26]  status=None
[2026-02-02 06:33:26]  status_code=0
[2026-02-02 06:33:26]  storage_token=
[2026-02-02 06:33:26]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6996115147/log.48431096._002078.job.log.tgz.1
[2026-02-02 06:33:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/01/log.48431096._002078.job.log.tgz.1
[2026-02-02 06:33:26]  workdir=None
[2026-02-02 06:33:26] ]
[2026-02-02 06:33:26] 2026-02-02 05:32:50,229 | INFO     | transferring file log.48431096._002078.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6996115147/log.48431096._002078.job.log.tgz.1 to /var/li
[2026-02-02 06:33:26] 2026-02-02 05:32:50,229 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6996115147/log.48431096._002078.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-02 06:33:26] 2026-02-02 05:32:50,250 | INFO     | adding to output.list: log.48431096._002078.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/01/log.48431096._002078.job.log.tg
[2026-02-02 06:33:26] 2026-02-02 05:32:50,251 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 06:33:26] 2026-02-02 05:32:50,251 | INFO     | summary of transferred files:
[2026-02-02 06:33:26] 2026-02-02 05:32:50,251 | INFO     |  -- lfn=log.48431096._002078.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 06:33:26] 2026-02-02 05:32:50,251 | INFO     | stage-out finished correctly
[2026-02-02 06:33:26] 2026-02-02 05:32:51,366 | INFO     | time since job start (4898s) is within the limit (349056.0s)
[2026-02-02 06:33:26] 2026-02-02 05:32:51,644 | INFO     | monitor loop #373: job 0:6996115147 is in state 'finished'
[2026-02-02 06:33:26] 2026-02-02 05:32:51,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,521 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 06:33:26] 2026-02-02 05:32:52,544 | INFO     | job 6996115147 has state=finished
[2026-02-02 06:33:26] 2026-02-02 05:32:52,544 | INFO     | preparing for final server update for job 6996115147 in state='finished'
[2026-02-02 06:33:26] 2026-02-02 05:32:52,545 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6996115147/jobReport.json
[2026-02-02 06:33:26] 2026-02-02 05:32:52,546 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/0/workernode_map.json
[2026-02-02 06:33:26] 2026-02-02 05:32:52,546 | INFO     | this job has now completed (state=finished)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,546 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,546 | INFO     | log transfer has been attempted: DONE
[2026-02-02 06:33:26] 2026-02-02 05:32:52,546 | INFO     | job 6996115147 has finished - writing final server update
[2026-02-02 06:33:26] 2026-02-02 05:32:52,547 | INFO     | total number of processed events: 400 (read)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,548 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6996115147/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,548 | INFO     | extracted standard info from prmon json
[2026-02-02 06:33:26] 2026-02-02 05:32:52,548 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 06:33:26] 2026-02-02 05:32:52,548 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 06:33:26] 2026-02-02 05:32:52,548 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 06:33:26] 2026-02-02 05:32:52,548 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 06:33:26] 2026-02-02 05:32:52,549 | INFO     | fitting pss+swap vs Time
[2026-02-02 06:33:26] 2026-02-02 05:32:52,549 | INFO     | sum of square deviations: 120605052.0
[2026-02-02 06:33:26] 2026-02-02 05:32:52,549 | INFO     | sum of deviations: -3694370998.9999986
[2026-02-02 06:33:26] 2026-02-02 05:32:52,549 | INFO     | mean x: 1770008001.0
[2026-02-02 06:33:26] 2026-02-02 05:32:52,549 | INFO     | mean y: 2422368.109589041
[2026-02-02 06:33:26] 2026-02-02 05:32:52,549 | INFO     | intersect: 54221264103.63125
[2026-02-02 06:33:26] 2026-02-02 05:32:52,549 | INFO     | chi2: 0.0056541921070441216
[2026-02-02 06:33:26] 2026-02-02 05:32:52,549 | INFO     | current memory leak: -30.63 B/s (using 73 data points, chi2=0.01)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | could have reported an average CPU frequency of 4399 MHz (6 samples)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | ..............................
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | . Timing measurements:
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | . get job = 0 s
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | . initial setup = 7 s
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | . payload setup = 8 s
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | . stage-in = 0 s
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | . payload execution = 4873 s
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | . stage-out = 0 s
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | . log creation = 0 s
[2026-02-02 06:33:26] 2026-02-02 05:32:52,550 | INFO     | ..............................
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | 
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | job summary report
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | --------------------------------------------------
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | PanDA job id: 6996115147
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | task id: 48431096
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | errors: (none)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | pilot state: finished 
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | transexitcode: 0
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | exeerrorcode: 0
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | exeerrordiag: 
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | exitcode: 0
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | exitmsg: OK
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | cpuconsumptiontime: 18402 s
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | nevents: 400
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | neventsw: 0
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | pid: 630625
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | pgrp: 630625
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | corecount: 4
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | event service: False
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | sizes: {0: 2278276, 11: 2278276, 4885: 2304510, 4886: 2313536, 4888: 2313786}
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | --------------------------------------------------
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | 
[2026-02-02 06:33:26] 2026-02-02 05:32:52,574 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2026-02-02 06:33:26] 2026-02-02 05:32:52,596 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 06:33:26] 2026-02-02 05:32:52,597 | INFO     | job 6996115147 has completed (purged errors)
[2026-02-02 06:33:26] 2026-02-02 05:32:52,598 | INFO     | overall cleanup function is called
[2026-02-02 06:33:26] 2026-02-02 05:32:53,600 | INFO     | --- collectZombieJob: --- 10, [630625]
[2026-02-02 06:33:26] 2026-02-02 05:32:53,601 | INFO     | zombie collector waiting for pid 630625
[2026-02-02 06:33:26] 2026-02-02 05:32:53,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 06:33:26] 2026-02-02 05:32:53,601 | INFO     | collected zombie processes
[2026-02-02 06:33:26] 2026-02-02 05:32:53,601 | INFO     | will attempt to kill all subprocesses of pid=630625
[2026-02-02 06:33:26] 2026-02-02 05:32:53,710 | INFO     | process IDs to be killed: [630625] (in reverse order)
[2026-02-02 06:33:26] 2026-02-02 05:32:53,770 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 06:33:26] 2026-02-02 05:32:53,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 06:33:26] 2026-02-02 05:32:53,774 | INFO     | did not find any defunct processes belonging to 630625
[2026-02-02 06:33:26] 2026-02-02 05:32:53,778 | INFO     | did not find any defunct processes belonging to 630625
[2026-02-02 06:33:26] 2026-02-02 05:32:53,778 | INFO     | ready for new job
[2026-02-02 06:33:26] 2026-02-02 05:32:53,778 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 06:33:26] 2026-02-02 05:32:53,779 | INFO     | **************************************
[2026-02-02 06:33:26] 2026-02-02 05:32:53,780 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 06:33:26] 2026-02-02 05:32:53,780 | INFO     | **************************************
[2026-02-02 06:33:26] 2026-02-02 05:32:53,780 | INFO     | 
[2026-02-02 06:33:26] 2026-02-02 05:32:53,780 | INFO     | pilot is running in a VM
[2026-02-02 06:33:26] 2026-02-02 05:32:53,780 | INFO     | architecture information:
[2026-02-02 06:33:26] 2026-02-02 05:32:53,781 | INFO     | executing command: cat /etc/os-release
[2026-02-02 06:33:26] 2026-02-02 05:32:53,795 | INFO     | cat /etc/os-release:
[2026-02-02 06:33:26] NAME="CentOS Linux"
[2026-02-02 06:33:26] VERSION="7 (Core)"
[2026-02-02 06:33:26] ID="centos"
[2026-02-02 06:33:26] ID_LIKE="rhel fedora"
[2026-02-02 06:33:26] VERSION_ID="7"
[2026-02-02 06:33:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 06:33:26] ANSI_COLOR="0;31"
[2026-02-02 06:33:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 06:33:26] HOME_URL="https://www.centos.org/"
[2026-02-02 06:33:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 06:33:26] 
[2026-02-02 06:33:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 06:33:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 06:33:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 06:33:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 06:33:26] 
[2026-02-02 06:33:26] 2026-02-02 05:32:53,795 | INFO     | **************************************
[2026-02-02 06:33:26] 2026-02-02 05:32:54,298 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-02-02 06:33:26] 2026-02-02 05:32:54,313 | INFO     | sufficient remaining disk space (147076415488 B)
[2026-02-02 06:33:26] 2026-02-02 05:32:54,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 06:33:26] 2026-02-02 05:32:54,314 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 06:33:26] 2026-02-02 05:32:54,314 | INFO     | update_server=False
[2026-02-02 06:33:26] 2026-02-02 05:32:54,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 06:33:26] 2026-02-02 05:32:54,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 06:33:26] 2026-02-02 05:32:54,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 06:33:26] 2026-02-02 05:32:54,686 | INFO     | all data control threads have been joined
[2026-02-02 06:33:26] 2026-02-02 05:32:54,810 | INFO     | all job control threads have been joined
[2026-02-02 06:33:26] 2026-02-02 05:32:54,973 | INFO     | all payload control threads have been joined
[2026-02-02 06:33:26] 2026-02-02 05:32:55,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 06:33:26] 2026-02-02 05:32:55,154 | INFO     | aborting loop
[2026-02-02 06:33:26] 2026-02-02 05:32:55,320 | INFO     | [job] retrieve thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:55,320 | INFO     | [job] queue monitor thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:55,692 | INFO     | [data] control thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:55,696 | INFO     | [payload] validate_post thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:55,745 | INFO     | [job] validate thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:55,754 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:55,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 06:33:26] 2026-02-02 05:32:55,815 | INFO     | [job] control thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:55,830 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:55,979 | INFO     | [payload] control thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:55,988 | INFO     | [data] copytool_in thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:56,159 | INFO     | [job] job monitor thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:56,525 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:56,774 | INFO     | [payload] failed_post thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:57,796 | INFO     | [data] copytool_out thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:32:58,321 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:33:05,039 | INFO     | job.realtimelogging is not enabled
[2026-02-02 06:33:26] 2026-02-02 05:33:06,044 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 06:33:26] 2026-02-02 05:33:19,923 | INFO     | [monitor] cgroup control has ended
[2026-02-02 06:33:26] 2026-02-02 05:33:21,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138690075322176)>', '<ExcThread(monitor, started 138689418077952)>']
[2026-02-02 06:33:26] 2026-02-02 05:33:24,594 | INFO     | PID=626077 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 06:33:26] 2026-02-02 05:33:24,594 | INFO     | .. there are 2 such processes running
[2026-02-02 06:33:26] 2026-02-02 05:33:24,595 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 06:33:26] 2026-02-02 05:33:24,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 06:33:26] 2026-02-02 05:33:24,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 06:33:26] 2026-02-02 05:33:24,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 06:33:26] 2026-02-02 05:33:24,595 | INFO     | [monitor] control thread has ended
[2026-02-02 06:33:26] 2026-02-02 05:33:26,366 | INFO     | all workflow threads have been joined
[2026-02-02 06:33:26] 2026-02-02 05:33:26,366 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 06:33:26] 2026-02-02 05:33:26,366 | INFO     | traces error code: 0
[2026-02-02 06:33:26] 2026-02-02 05:33:26,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 06:33:26] 2026-02-02 05:33:26,442 [wrapper] ==== pilot stdout END ====
[2026-02-02 06:33:26] 2026-02-02 05:33:26,446 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 06:33:26] 2026-02-02 05:33:26,451 [wrapper] pilotpid: 626077
[2026-02-02 06:33:26] 2026-02-02 05:33:26,456 [wrapper] Pilot exit status: 0
[2026-02-02 06:33:26] 2026-02-02 05:33:26,471 [wrapper] pandaids: 6996115147
[2026-02-02 06:33:26] 2026-02-02 05:33:26,537 [wrapper] cleanup supervisor_pilot  673367 626078
[2026-02-02 06:33:26] 2026-02-02 05:33:26,542 [wrapper] Test setup, not cleaning
[2026-02-02 06:33:26] 2026-02-02 05:33:26,547 [wrapper] apfmon messages muted
[2026-02-02 06:33:26] 2026-02-02 05:33:26,552 [wrapper] ==== wrapper stdout END ====
[2026-02-02 06:33:26] 2026-02-02 05:33:26,557 [wrapper] ==== wrapper stderr END ====
[2026-02-02 06:33:26]  *** Error codes and diagnostics ***
[2026-02-02 06:33:26]     "exeErrorCode": 0,
[2026-02-02 06:33:26]     "exeErrorDiag": "",
[2026-02-02 06:33:26]     "pilotErrorCode": 0,
[2026-02-02 06:33:26]     "pilotErrorDiag": "",
[2026-02-02 06:33:26]  *** Listing of results directory ***
[2026-02-02 06:33:26] insgesamt 935532
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc    584422 Feb  1 16:06 pilot3.tar.gz
[2026-02-02 06:33:26] -rwx------ 1 yeti boinc     36322 Feb  1 16:09 runpilot2-wrapper.sh
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc      5111 Feb  1 16:12 queuedata.json
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc       100 Feb  2 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 06:33:26] -rwxr-xr-x 1 yeti boinc      7986 Feb  2 05:10 run_atlas
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc       105 Feb  2 05:10 job.xml
[2026-02-02 06:33:26] -rw-r--r-- 2 yeti boinc 677857183 Feb  2 05:10 EVNT.48431094._000041.pool.root.1
[2026-02-02 06:33:26] -rw-r--r-- 2 yeti boinc     15845 Feb  2 05:10 start_atlas.sh
[2026-02-02 06:33:26] drwxrwx--x 2 yeti boinc      4096 Feb  2 05:10 shared
[2026-02-02 06:33:26] -rw-r--r-- 2 yeti boinc    597765 Feb  2 05:10 input.tar.gz
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc      6732 Feb  2 05:10 init_data.xml
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc         0 Feb  2 05:10 boinc_setup_complete
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc         0 Feb  2 05:10 boinc_lockfile
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc      2552 Feb  2 05:10 pandaJob.out
[2026-02-02 06:33:26] -rw------- 1 yeti boinc        52 Feb  2 05:10 setup.sh.local
[2026-02-02 06:33:26] -rw------- 1 yeti boinc   1009823 Feb  2 05:11 agis_schedconf.cvmfs.json
[2026-02-02 06:33:26] -rw------- 1 yeti boinc   1511668 Feb  2 05:11 agis_ddmendpoints.agis.ALL.json
[2026-02-02 06:33:26] -rw------- 1 yeti boinc       425 Feb  2 05:11 workernode_map.json
[2026-02-02 06:33:26] drwx------ 5 yeti boinc      4096 Feb  2 05:11 pilot3
[2026-02-02 06:33:26] -rw------- 1 yeti boinc 274188661 Feb  2 06:32 HITS.48431096._002078.pool.root.1
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc       530 Feb  2 06:32 boinc_task_state.xml
[2026-02-02 06:33:26] -rw------- 1 yeti boinc      1016 Feb  2 06:32 memory_monitor_summary.json
[2026-02-02 06:33:26] -rw------- 1 yeti boinc    259654 Feb  2 06:32 log.48431096._002078.job.log.tgz.1
[2026-02-02 06:33:26] -rw------- 1 yeti boinc      6278 Feb  2 06:32 heartbeat.json
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc      8192 Feb  2 06:33 boinc_mmap_file
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc        27 Feb  2 06:33 wrapper_checkpoint.txt
[2026-02-02 06:33:26] -rw------- 1 yeti boinc        95 Feb  2 06:33 pilot_heartbeat.json
[2026-02-02 06:33:26] -rw------- 1 yeti boinc      4967 Feb  2 06:33 pilotlog.txt
[2026-02-02 06:33:26] -rw------- 1 yeti boinc    734744 Feb  2 06:33 log.48431096._002078.job.log.1
[2026-02-02 06:33:26] -rw------- 1 yeti boinc       357 Feb  2 06:33 output.list
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc       620 Feb  2 06:33 runtime_log
[2026-02-02 06:33:26] -rw------- 1 yeti boinc   1013760 Feb  2 06:33 result.tar.gz
[2026-02-02 06:33:26] -rw------- 1 yeti boinc       640 Feb  2 06:33 VxjNDmEGo68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFgQKDmN0G1Po.diag
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc      9556 Feb  2 06:33 runtime_log.err
[2026-02-02 06:33:26] -rw-r--r-- 1 yeti boinc     20988 Feb  2 06:33 stderr.txt
[2026-02-02 06:33:26] HITS file was successfully produced:
[2026-02-02 06:33:26] -rw------- 1 yeti boinc 274188661 Feb  2 06:32 shared/HITS.pool.root.1
[2026-02-02 06:33:26]  *** Contents of shared directory: ***
[2026-02-02 06:33:26] insgesamt 931336
[2026-02-02 06:33:26] -rw-r--r-- 2 yeti boinc 677857183 Feb  2 05:10 ATLAS.root_0
[2026-02-02 06:33:26] -rw-r--r-- 2 yeti boinc     15845 Feb  2 05:10 start_atlas.sh
[2026-02-02 06:33:26] -rw-r--r-- 2 yeti boinc    597765 Feb  2 05:10 input.tar.gz
[2026-02-02 06:33:26] -rw------- 1 yeti boinc 274188661 Feb  2 06:32 HITS.pool.root.1
[2026-02-02 06:33:26] -rw------- 1 yeti boinc   1013760 Feb  2 06:33 result.tar.gz
06:33:28 (622044): run_atlas exited; CPU time 18532.564771
06:33:28 (622044): called boinc_finish(0)

</stderr_txt>
]]>

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