Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:52:41 (2602852): wrapper (7.7.26015): starting
12:52:41 (2602852): wrapper: running run_atlas (--nthreads 12)
[2026-02-01 12:52:41] Arguments: --nthreads 12
[2026-02-01 12:52:41] Threads: 12
[2026-02-01 12:52:41] Checking for CVMFS
[2026-02-01 12:52:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 12:52:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 12:52:42] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 12:52:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 12:52:42] 2.11.5.0 444197 90174 230040 155762 1 553 44959247 45568001 10722 130560 0 739217529 99.792 463632035 18975 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-01 12:52:42] CVMFS is ok
[2026-02-01 12:52:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 12:52:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 12:52:42] Further information can be found at the LHC@home message board.
[2026-02-01 12:52:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 12:52:42] Checking for apptainer binary...
[2026-02-01 12:52:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 12:52:42] Running /usr/bin/apptainer --version
[2026-02-01 12:52:42] apptainer version 1.4.1-1.el9
[2026-02-01 12:52:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 12:52:42] wns0087.triumf.lcg
[2026-02-01 12:52:42] apptainer works
[2026-02-01 12:52:42] Set ATHENA_PROC_NUMBER=12
[2026-02-01 12:52:42] Set ATHENA_CORE_NUMBER=12
[2026-02-01 12:52:42] Starting ATLAS job with PandaID=6996114857
[2026-02-01 12:52:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 12:56:03]  *** The last 200 lines of the pilot log: ***
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | could have reported an average CPU frequency of 2576 MHz (4 samples)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | ..............................
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . Timing measurements:
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . get job = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . initial setup = 6 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . payload setup = 5 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . stage-in = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . payload execution = 17 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . stage-out = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . log creation = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | ..............................
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-01 12:56:03] 2026-02-01 20:55:30,506 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996114857/pilotlog.txt
[2026-02-01 12:56:03] 2026-02-01 20:55:30,516 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-01 12:56:03] - Log from pilotlog.txt -
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | WARNING  | found no stored workdir sizes
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | INFO     | will not add max space = 0 B to job metrics
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | WARNING  | wrong length of table data, x=[1769979197.0], y=[1084.0] (must be same and length>=4)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | could have reported an average CPU frequency of 2576 MHz (4 samples)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | ..............................
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . Timing measurements:
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . get job = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . initial setup = 6 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . payload setup = 5 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . stage-in = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . payload execution = 17 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . stage-out = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . log creation = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | ..............................
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-01 12:56:03] 2026-02-01 20:55:30,506 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996114857/pilotlog.txt
[2026-02-01 12:56:03] 2026-02-01 20:55:30,516 | WARNING  | 
[2026-02-01 12:56:03] [begin log extracts]
[2026-02-01 12:56:03] - Log from pilotlog.txt -
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | WARNING  | found no stored workdir sizes
[2026-02-01 12:56:03] 2026-02-01 20:55:30,504 | INFO     | will not add max space = 0 B to job metrics
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | WARNING  | wrong length of table data, x=[1769979197.0], y=[1084.0] (must be same and length>=4)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | could have reported an average CPU frequency of 2576 MHz (4 samples)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | ..............................
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . Timing measurements:
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . get job = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . initial setup = 6 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . payload setup = 5 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . stage-in = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . payload execution = 17 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . stage-out = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | . log creation = 0 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | ..............................
[2026-02-01 12:56:03] 2026-02-01 20:55:30,505 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-01 12:56:03] 2026-02-01 20:55:30,506 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996114857/pilotlog.txt
[2026-02-01 12:56:03] [end log extracts]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,517 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,517 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-01 12:56:03] 2026-02-01 20:55:30,845 | INFO     | 
[2026-02-01 12:56:03] 2026-02-01 20:55:30,845 | INFO     | job summary report
[2026-02-01 12:56:03] 2026-02-01 20:55:30,845 | INFO     | --------------------------------------------------
[2026-02-01 12:56:03] 2026-02-01 20:55:30,845 | INFO     | PanDA job id: 6996114857
[2026-02-01 12:56:03] 2026-02-01 20:55:30,845 | INFO     | task id: 48431096
[2026-02-01 12:56:03] 2026-02-01 20:55:30,845 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-01 12:53:25,084 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | pilot state: failed 
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | transexitcode: 65
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | exeerrorcode: 65
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | exitcode: 65
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | cpuconsumptiontime: 13 s
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | nevents: 0
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | neventsw: 0
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | pid: 2610973
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | pgrp: 2610973
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | corecount: 12
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | event service: False
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | sizes: {0: 2278261, 11: 2278261, 26: 2305753, 27: 2305753, 144: 2305919}
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | --------------------------------------------------
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | 
[2026-02-01 12:56:03] 2026-02-01 20:55:30,846 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-01 12:56:03] 2026-02-01 20:55:30,864 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,864 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,865 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,865 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | job 6996114857 has completed (purged errors)
[2026-02-01 12:56:03] 2026-02-01 20:55:30,866 | INFO     | overall cleanup function is called
[2026-02-01 12:56:03] 2026-02-01 20:55:31,112 | INFO     | PID=2606483 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 12:56:03] 2026-02-01 20:55:31,112 | INFO     | .. there are 11 such processes running
[2026-02-01 12:56:03] 2026-02-01 20:55:31,868 | INFO     | --- collectZombieJob: --- 10, [2610973]
[2026-02-01 12:56:03] 2026-02-01 20:55:31,868 | INFO     | zombie collector waiting for pid 2610973
[2026-02-01 12:56:03] 2026-02-01 20:55:31,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 12:56:03] 2026-02-01 20:55:31,868 | INFO     | collected zombie processes
[2026-02-01 12:56:03] 2026-02-01 20:55:31,868 | INFO     | will attempt to kill all subprocesses of pid=2610973
[2026-02-01 12:56:03] 2026-02-01 20:55:31,995 | INFO     | process IDs to be killed: [2610973] (in reverse order)
[2026-02-01 12:56:03] 2026-02-01 20:55:32,049 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 12:56:03] 2026-02-01 20:55:32,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 12:56:03] 2026-02-01 20:55:32,056 | INFO     | did not find any defunct processes belonging to 2610973
[2026-02-01 12:56:03] 2026-02-01 20:55:32,062 | INFO     | did not find any defunct processes belonging to 2610973
[2026-02-01 12:56:03] 2026-02-01 20:55:32,062 | INFO     | ready for new job
[2026-02-01 12:56:03] 2026-02-01 20:55:32,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 12:56:03] 2026-02-01 20:55:32,064 | INFO     | **************************************
[2026-02-01 12:56:03] 2026-02-01 20:55:32,064 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 12:56:03] 2026-02-01 20:55:32,064 | INFO     | **************************************
[2026-02-01 12:56:03] 2026-02-01 20:55:32,064 | INFO     | 
[2026-02-01 12:56:03] 2026-02-01 20:55:32,066 | INFO     | architecture information:
[2026-02-01 12:56:03] 2026-02-01 20:55:32,067 | INFO     | executing command: cat /etc/os-release
[2026-02-01 12:56:03] 2026-02-01 20:55:32,081 | INFO     | cat /etc/os-release:
[2026-02-01 12:56:03] NAME="CentOS Linux"
[2026-02-01 12:56:03] VERSION="7 (Core)"
[2026-02-01 12:56:03] ID="centos"
[2026-02-01 12:56:03] ID_LIKE="rhel fedora"
[2026-02-01 12:56:03] VERSION_ID="7"
[2026-02-01 12:56:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 12:56:03] ANSI_COLOR="0;31"
[2026-02-01 12:56:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 12:56:03] HOME_URL="https://www.centos.org/"
[2026-02-01 12:56:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 12:56:03] 
[2026-02-01 12:56:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 12:56:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 12:56:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 12:56:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 12:56:03] 
[2026-02-01 12:56:03] 2026-02-01 20:55:32,081 | INFO     | **************************************
[2026-02-01 12:56:03] 2026-02-01 20:55:32,583 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-01 12:56:03] 2026-02-01 20:55:32,596 | INFO     | sufficient remaining disk space (2027351441408 B)
[2026-02-01 12:56:03] 2026-02-01 20:55:32,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 12:56:03] 2026-02-01 20:55:32,596 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 12:56:03] 2026-02-01 20:55:32,596 | INFO     | update_server=False
[2026-02-01 12:56:03] 2026-02-01 20:55:32,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 12:56:03] 2026-02-01 20:55:32,637 | INFO     | all data control threads have been joined
[2026-02-01 12:56:03] 2026-02-01 20:55:32,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 12:56:03] 2026-02-01 20:55:32,863 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-01 12:56:03] 2026-02-01 20:55:32,863 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-01 12:56:03] 2026-02-01 20:55:32,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 12:56:03] 2026-02-01 20:55:32,863 | INFO     | will abort loop
[2026-02-01 12:56:03] 2026-02-01 20:55:32,991 | INFO     | all job control threads have been joined
[2026-02-01 12:56:03] 2026-02-01 20:55:33,601 | INFO     | [job] retrieve thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:33,633 | INFO     | [payload] validate_post thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:33,643 | INFO     | [data] control thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:33,677 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:33,731 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:33,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 12:56:03] 2026-02-01 20:55:33,869 | INFO     | [job] job monitor thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:33,892 | INFO     | [data] copytool_in thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:33,914 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:33,971 | INFO     | all payload control threads have been joined
[2026-02-01 12:56:03] 2026-02-01 20:55:33,996 | INFO     | [job] control thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:34,194 | INFO     | [payload] failed_post thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:34,924 | INFO     | [job] validate thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:34,977 | INFO     | [payload] control thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:35,051 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:35,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 12:56:03] 2026-02-01 20:55:35,795 | INFO     | [data] copytool_out thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:36,591 | INFO     | [job] queue monitor thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:36,652 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 12:56:03] 2026-02-01 20:55:55,699 | INFO     | [monitor] cgroup control has ended
[2026-02-01 12:56:03] 2026-02-01 20:55:57,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312010815296)>', '<ExcThread(monitor, started 140311313495808)>']
[2026-02-01 12:56:03] 2026-02-01 20:56:02,224 | INFO     | all workflow threads have been joined
[2026-02-01 12:56:03] 2026-02-01 20:56:02,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 12:56:03] 2026-02-01 20:56:02,227 | INFO     | traces error code: 0
[2026-02-01 12:56:03] 2026-02-01 20:56:02,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 12:56:03] 2026-02-01 20:56:03,336 | INFO     | PID=2606483 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 12:56:03] 2026-02-01 20:56:03,337 | INFO     | .. there are 11 such processes running
[2026-02-01 12:56:03] 2026-02-01 20:56:03,338 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 12:56:03] 2026-02-01 20:56:03,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 12:56:03] 2026-02-01 20:56:03,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 12:56:03] 2026-02-01 20:56:03,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 12:56:03] 2026-02-01 20:56:03,338 | INFO     | [monitor] control thread has ended
[2026-02-01 12:56:03] 2026-02-01 20:56:03,469 [wrapper] ==== pilot stdout END ====
[2026-02-01 12:56:03] 2026-02-01 20:56:03,472 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 12:56:03] 2026-02-01 20:56:03,474 [wrapper] pilotpid: 2606483
[2026-02-01 12:56:03] 2026-02-01 20:56:03,476 [wrapper] Pilot exit status: 0
[2026-02-01 12:56:03] 2026-02-01 20:56:03,484 [wrapper] pandaids: 6996114857
[2026-02-01 12:56:03] 2026-02-01 20:56:03,519 [wrapper] cleanup supervisor_pilot 2606489 2606484
[2026-02-01 12:56:03] 2026-02-01 20:56:03,521 [wrapper] Test setup, not cleaning
[2026-02-01 12:56:03] 2026-02-01 20:56:03,524 [wrapper] apfmon messages muted
[2026-02-01 12:56:03] 2026-02-01 20:56:03,527 [wrapper] ==== wrapper stdout END ====
[2026-02-01 12:56:03] 2026-02-01 20:56:03,529 [wrapper] ==== wrapper stderr END ====
[2026-02-01 12:56:03]  *** Error codes and diagnostics ***
[2026-02-01 12:56:03]     "exeErrorCode": 65,
[2026-02-01 12:56:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-01 12:56:03]     "pilotErrorCode": 1305,
[2026-02-01 12:56:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-01 12:56:03]  *** Listing of results directory ***
[2026-02-01 12:56:03] total 668516
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc    584422 Feb  1 07:06 pilot3.tar.gz
[2026-02-01 12:56:03] -rwx------. 1 boinc boinc     36322 Feb  1 07:09 runpilot2-wrapper.sh
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc      5111 Feb  1 07:12 queuedata.json
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc       100 Feb  1 12:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 12:56:03] -rwxr-xr-x. 1 boinc boinc      7986 Feb  1 12:52 run_atlas
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc       105 Feb  1 12:52 job.xml
[2026-02-01 12:56:03] -rw-r--r--. 2 boinc boinc 680422630 Feb  1 12:52 EVNT.48431094._000039.pool.root.1
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc      6594 Feb  1 12:52 init_data.xml
[2026-02-01 12:56:03] -rw-r--r--. 2 boinc boinc     15845 Feb  1 12:52 start_atlas.sh
[2026-02-01 12:56:03] drwxrwx--x. 2 boinc boinc      4096 Feb  1 12:52 shared
[2026-02-01 12:56:03] -rw-r--r--. 2 boinc boinc    597771 Feb  1 12:52 input.tar.gz
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc         0 Feb  1 12:52 boinc_lockfile
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc      2553 Feb  1 12:52 pandaJob.out
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc   1009757 Feb  1 12:52 agis_schedconf.cvmfs.json
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc   1511668 Feb  1 12:52 agis_ddmendpoints.agis.ALL.json
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc       444 Feb  1 12:52 workernode_map.json
[2026-02-01 12:56:03] drwx------. 5 boinc boinc      4096 Feb  1 12:52 pilot3
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc       522 Feb  1 12:53 boinc_task_state.xml
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc       951 Feb  1 12:53 memory_monitor_summary.json
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc     20739 Feb  1 12:53 log.48431096._002019.job.log.tgz.1
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc      7002 Feb  1 12:55 heartbeat.json
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc      8192 Feb  1 12:56 boinc_mmap_file
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc        22 Feb  1 12:56 wrapper_checkpoint.txt
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc        95 Feb  1 12:56 pilot_heartbeat.json
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc       823 Feb  1 12:56 pilotlog.txt
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc     80331 Feb  1 12:56 log.48431096._002019.job.log.1
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc       188 Feb  1 12:56 output.list
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc       620 Feb  1 12:56 runtime_log
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc    122880 Feb  1 12:56 result.tar.gz
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc      8635 Feb  1 12:56 runtime_log.err
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc       644 Feb  1 12:56 1ScMDmEGo68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkfQKDm6IxsTm.diag
[2026-02-01 12:56:03] -rw-r--r--. 1 boinc boinc     21721 Feb  1 12:56 stderr.txt
[2026-02-01 12:56:03] No HITS result produced
[2026-02-01 12:56:03]  *** Contents of shared directory: ***
[2026-02-01 12:56:03] total 665200
[2026-02-01 12:56:03] -rw-r--r--. 2 boinc boinc 680422630 Feb  1 12:52 ATLAS.root_0
[2026-02-01 12:56:03] -rw-r--r--. 2 boinc boinc     15845 Feb  1 12:52 start_atlas.sh
[2026-02-01 12:56:03] -rw-r--r--. 2 boinc boinc    597771 Feb  1 12:52 input.tar.gz
[2026-02-01 12:56:03] -rw-------. 1 boinc boinc    122880 Feb  1 12:56 result.tar.gz
12:56:04 (2602852): run_atlas exited; CPU time 16.262061
12:56:04 (2602852): called boinc_finish(0)

</stderr_txt>
]]>

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