Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:24:53 (25835): wrapper (7.7.26015): starting
02:24:53 (25835): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 02:24:53] Arguments: --nthreads 8
[2026-02-02 02:24:53] Threads: 8
[2026-02-02 02:24:53] Checking for CVMFS
[2026-02-02 02:24:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 02:24:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 02:24:54] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 02:24:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 02:24:54] 2.11.0.0 4437 85928 60588 155769 3 11 3299590 4096000 918 130560 1 794813 98.564 3554260 308 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-02 02:24:54] CVMFS is ok
[2026-02-02 02:24:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 02:24:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 02:24:54] Further information can be found at the LHC@home message board.
[2026-02-02 02:24:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 02:24:54] Checking for apptainer binary...
[2026-02-02 02:24:54] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-02 02:24:54] apptainer is not installed, using version from CVMFS
[2026-02-02 02:24:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 02:24:54] WARNING: Environment variable TMPDIR already has value [/tmp/job_11072420/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node399
[2026-02-02 02:24:54] apptainer works
[2026-02-02 02:24:54] Set ATHENA_PROC_NUMBER=8
[2026-02-02 02:24:54] Set ATHENA_CORE_NUMBER=8
[2026-02-02 02:24:54] Starting ATLAS job with PandaID=6996113218
[2026-02-02 02:24:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11072420/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 03:34:13]  *** The last 200 lines of the pilot log: ***
[2026-02-02 03:34:13]  protocol_id=None
[2026-02-02 03:34:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 03:34:13]  replicas=None
[2026-02-02 03:34:13]  scope=mc23_13p6TeV
[2026-02-02 03:34:13]  status=None
[2026-02-02 03:34:13]  status_code=0
[2026-02-02 03:34:13]  storage_token=
[2026-02-02 03:34:13]  surl=/tmp/job_11072420/atlas/pilot/slots/0/PanDA_Pilot-6996113218/log.48431096._001800.job.log.tgz.1
[2026-02-02 03:34:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/9b/log.48431096._001800.job.log.tgz.1
[2026-02-02 03:34:13]  workdir=None
[2026-02-02 03:34:13] ]
[2026-02-02 03:34:13] 2026-02-02 02:33:31,692 | INFO     | transferring file log.48431096._001800.job.log.tgz.1 from /tmp/job_11072420/atlas/pilot/slots/0/PanDA_Pilot-6996113218/log.48431096._001800.job.log.tgz.1 to /tmp/j
[2026-02-02 03:34:13] 2026-02-02 02:33:31,693 | INFO     | executing command: /usr/bin/env mv /tmp/job_11072420/atlas/pilot/slots/0/PanDA_Pilot-6996113218/log.48431096._001800.job.log.tgz.1 /tmp/job_11072420/atlas/pilot/sl
[2026-02-02 03:34:13] 2026-02-02 02:33:31,701 | INFO     | adding to output.list: log.48431096._001800.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/9b/log.48431096._001800.job.log.tg
[2026-02-02 03:34:13] 2026-02-02 02:33:31,701 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 03:34:13] 2026-02-02 02:33:31,701 | INFO     | summary of transferred files:
[2026-02-02 03:34:13] 2026-02-02 02:33:31,701 | INFO     |  -- lfn=log.48431096._001800.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 03:34:13] 2026-02-02 02:33:31,701 | INFO     | stage-out finished correctly
[2026-02-02 03:34:13] 2026-02-02 02:33:31,834 | INFO     | time since job start (4111s) is within the limit (349056.0s)
[2026-02-02 03:34:13] 2026-02-02 02:33:31,866 | INFO     | monitor loop #310: job 0:6996113218 is in state 'finished'
[2026-02-02 03:34:13] 2026-02-02 02:33:31,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 03:34:13] 2026-02-02 02:33:33,839 | INFO     | time since job start (4113s) is within the limit (349056.0s)
[2026-02-02 03:34:13] 2026-02-02 02:33:34,322 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 03:34:13] 2026-02-02 02:33:34,370 | INFO     | monitor loop #311: job 0:6996113218 is in state 'finished'
[2026-02-02 03:34:13] 2026-02-02 02:33:34,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 03:34:13] 2026-02-02 02:33:35,843 | INFO     | time since job start (4115s) is within the limit (349056.0s)
[2026-02-02 03:34:13] 2026-02-02 02:33:36,873 | INFO     | monitor loop #312: job 0:6996113218 is in state 'finished'
[2026-02-02 03:34:13] 2026-02-02 02:33:36,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,151 | INFO     | job 6996113218 has state=finished
[2026-02-02 03:34:13] 2026-02-02 02:33:37,151 | INFO     | preparing for final server update for job 6996113218 in state='finished'
[2026-02-02 03:34:13] 2026-02-02 02:33:37,152 | INFO     | reading metadata from: /tmp/job_11072420/atlas/pilot/slots/0/PanDA_Pilot-6996113218/jobReport.json
[2026-02-02 03:34:13] 2026-02-02 02:33:37,153 | INFO     | added worker_node to metadata from /tmp/job_11072420/atlas/pilot/slots/0/workernode_map.json
[2026-02-02 03:34:13] 2026-02-02 02:33:37,153 | INFO     | this job has now completed (state=finished)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,153 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,153 | INFO     | log transfer has been attempted: DONE
[2026-02-02 03:34:13] 2026-02-02 02:33:37,153 | INFO     | job 6996113218 has finished - writing final server update
[2026-02-02 03:34:13] 2026-02-02 02:33:37,153 | INFO     | total number of processed events: 400 (read)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,170 | INFO     | using path: /tmp/job_11072420/atlas/pilot/slots/0/PanDA_Pilot-6996113218/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,170 | INFO     | extracted standard info from prmon json
[2026-02-02 03:34:13] 2026-02-02 02:33:37,170 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 03:34:13] 2026-02-02 02:33:37,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 03:34:13] 2026-02-02 02:33:37,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 03:34:13] 2026-02-02 02:33:37,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 03:34:13] 2026-02-02 02:33:37,171 | INFO     | fitting pss+swap vs Time
[2026-02-02 03:34:13] 2026-02-02 02:33:37,171 | INFO     | sum of square deviations: 70364110.0
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | sum of deviations: -1268648414.9999998
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | mean x: 1769997652.0
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | mean y: 2660319.704918033
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | intersect: 31915303224.7814
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | chi2: 0.006030750644410899
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | current memory leak: -18.03 B/s (using 61 data points, chi2=0.01)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | could have reported an average CPU frequency of 2536 MHz (6 samples)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | ..............................
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | . Timing measurements:
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | . get job = 0 s
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | . initial setup = 2 s
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | . payload setup = 2 s
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | . stage-in = 0 s
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | . payload execution = 4093 s
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | . stage-out = 0 s
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | . log creation = 0 s
[2026-02-02 03:34:13] 2026-02-02 02:33:37,172 | INFO     | ..............................
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | 
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | job summary report
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | --------------------------------------------------
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | PanDA job id: 6996113218
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | task id: 48431096
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | errors: (none)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | pilot state: finished 
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | transexitcode: 0
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | exeerrorcode: 0
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | exeerrordiag: 
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | exitcode: 0
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | exitmsg: OK
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | cpuconsumptiontime: 30281 s
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | nevents: 400
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | neventsw: 0
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | pid: 10402
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | pgrp: 10402
[2026-02-02 03:34:13] 2026-02-02 02:33:37,254 | INFO     | corecount: 8
[2026-02-02 03:34:13] 2026-02-02 02:33:37,255 | INFO     | event service: False
[2026-02-02 03:34:13] 2026-02-02 02:33:37,255 | INFO     | sizes: {0: 2277847, 1: 2278419, 11: 2278419, 4099: 2304482, 4101: 2313510, 4103: 2313566, 4106: 2313888}
[2026-02-02 03:34:13] 2026-02-02 02:33:37,255 | INFO     | --------------------------------------------------
[2026-02-02 03:34:13] 2026-02-02 02:33:37,255 | INFO     | 
[2026-02-02 03:34:13] 2026-02-02 02:33:37,255 | INFO     | executing command: ls -lF /tmp/job_11072420/atlas/pilot/slots/0
[2026-02-02 03:34:13] 2026-02-02 02:33:37,264 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,264 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,264 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,264 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | job 6996113218 has completed (purged errors)
[2026-02-02 03:34:13] 2026-02-02 02:33:37,265 | INFO     | overall cleanup function is called
[2026-02-02 03:34:13] 2026-02-02 02:33:38,271 | INFO     | --- collectZombieJob: --- 10, [10402]
[2026-02-02 03:34:13] 2026-02-02 02:33:38,271 | INFO     | zombie collector waiting for pid 10402
[2026-02-02 03:34:13] 2026-02-02 02:33:38,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 03:34:13] 2026-02-02 02:33:38,271 | INFO     | collected zombie processes
[2026-02-02 03:34:13] 2026-02-02 02:33:38,271 | INFO     | will attempt to kill all subprocesses of pid=10402
[2026-02-02 03:34:13] 2026-02-02 02:33:38,373 | INFO     | process IDs to be killed: [10402] (in reverse order)
[2026-02-02 03:34:13] 2026-02-02 02:33:38,409 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 03:34:13] 2026-02-02 02:33:38,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 03:34:13] 2026-02-02 02:33:38,413 | INFO     | did not find any defunct processes belonging to 10402
[2026-02-02 03:34:13] 2026-02-02 02:33:38,416 | INFO     | did not find any defunct processes belonging to 10402
[2026-02-02 03:34:13] 2026-02-02 02:33:38,416 | INFO     | ready for new job
[2026-02-02 03:34:13] 2026-02-02 02:33:38,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 03:34:13] 2026-02-02 02:33:38,417 | INFO     | **************************************
[2026-02-02 03:34:13] 2026-02-02 02:33:38,417 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 03:34:13] 2026-02-02 02:33:38,417 | INFO     | **************************************
[2026-02-02 03:34:13] 2026-02-02 02:33:38,417 | INFO     | 
[2026-02-02 03:34:13] 2026-02-02 02:33:38,431 | INFO     | architecture information:
[2026-02-02 03:34:13] 2026-02-02 02:33:38,431 | INFO     | executing command: cat /etc/os-release
[2026-02-02 03:34:13] 2026-02-02 02:33:38,436 | INFO     | cat /etc/os-release:
[2026-02-02 03:34:13] NAME="CentOS Linux"
[2026-02-02 03:34:13] VERSION="7 (Core)"
[2026-02-02 03:34:13] ID="centos"
[2026-02-02 03:34:13] ID_LIKE="rhel fedora"
[2026-02-02 03:34:13] VERSION_ID="7"
[2026-02-02 03:34:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 03:34:13] ANSI_COLOR="0;31"
[2026-02-02 03:34:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 03:34:13] HOME_URL="https://www.centos.org/"
[2026-02-02 03:34:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 03:34:13] 
[2026-02-02 03:34:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 03:34:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 03:34:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 03:34:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 03:34:13] 
[2026-02-02 03:34:13] 2026-02-02 02:33:38,436 | INFO     | **************************************
[2026-02-02 03:34:13] 2026-02-02 02:33:38,939 | INFO     | executing command: df -mP /tmp/job_11072420/atlas/pilot/slots/0
[2026-02-02 03:34:13] 2026-02-02 02:33:38,945 | INFO     | sufficient remaining disk space (219121975296 B)
[2026-02-02 03:34:13] 2026-02-02 02:33:38,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 03:34:13] 2026-02-02 02:33:38,945 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 03:34:13] 2026-02-02 02:33:38,945 | INFO     | update_server=False
[2026-02-02 03:34:13] 2026-02-02 02:33:38,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 03:34:13] 2026-02-02 02:33:38,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 03:34:13] 2026-02-02 02:33:39,103 | INFO     | all data control threads have been joined
[2026-02-02 03:34:13] 2026-02-02 02:33:39,172 | INFO     | all payload control threads have been joined
[2026-02-02 03:34:13] 2026-02-02 02:33:39,376 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 03:34:13] 2026-02-02 02:33:39,376 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 03:34:13] 2026-02-02 02:33:39,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 03:34:13] 2026-02-02 02:33:39,376 | INFO     | will abort loop
[2026-02-02 03:34:13] 2026-02-02 02:33:39,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 03:34:13] 2026-02-02 02:33:39,911 | INFO     | all job control threads have been joined
[2026-02-02 03:34:13] 2026-02-02 02:33:39,951 | INFO     | [job] retrieve thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:39,951 | INFO     | [job] queue monitor thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:40,036 | INFO     | [payload] failed_post thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:40,036 | INFO     | [data] copytool_in thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:40,108 | INFO     | [data] control thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:40,177 | INFO     | [payload] control thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:40,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 03:34:13] 2026-02-02 02:33:40,381 | INFO     | [job] job monitor thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:40,781 | INFO     | [payload] validate_post thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:40,917 | INFO     | [job] control thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:41,036 | INFO     | [job] validate thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:41,242 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:41,254 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:41,356 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:41,767 | INFO     | [data] copytool_out thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:44,382 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:33:49,548 | INFO     | job.realtimelogging is not enabled
[2026-02-02 03:34:13] 2026-02-02 02:33:50,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 03:34:13] 2026-02-02 02:34:06,876 | INFO     | [monitor] cgroup control has ended
[2026-02-02 03:34:13] 2026-02-02 02:34:07,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-02-02 03:34:13] 2026-02-02 02:34:09,038 | INFO     | PID=722 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-02-02 03:34:13] 2026-02-02 02:34:09,039 | INFO     | .. there are 5 such processes running
[2026-02-02 03:34:13] 2026-02-02 02:34:09,039 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 03:34:13] 2026-02-02 02:34:09,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 03:34:13] 2026-02-02 02:34:09,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 03:34:13] 2026-02-02 02:34:09,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 03:34:13] 2026-02-02 02:34:09,039 | INFO     | [monitor] control thread has ended
[2026-02-02 03:34:13] 2026-02-02 02:34:13,023 | INFO     | all workflow threads have been joined
[2026-02-02 03:34:13] 2026-02-02 02:34:13,023 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 03:34:13] 2026-02-02 02:34:13,023 | INFO     | traces error code: 0
[2026-02-02 03:34:13] 2026-02-02 02:34:13,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 03:34:13] 2026-02-02 02:34:13,079 [wrapper] ==== pilot stdout END ====
[2026-02-02 03:34:13] 2026-02-02 02:34:13,080 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 03:34:13] 2026-02-02 02:34:13,081 [wrapper] pilotpid: 722
[2026-02-02 03:34:13] 2026-02-02 02:34:13,082 [wrapper] Pilot exit status: 0
[2026-02-02 03:34:13] 2026-02-02 02:34:13,086 [wrapper] pandaids: 6996113218
[2026-02-02 03:34:13] 2026-02-02 02:34:13,107 [wrapper] cleanup supervisor_pilot  5750 723
[2026-02-02 03:34:13] 2026-02-02 02:34:13,109 [wrapper] Test setup, not cleaning
[2026-02-02 03:34:13] 2026-02-02 02:34:13,109 [wrapper] apfmon messages muted
[2026-02-02 03:34:13] 2026-02-02 02:34:13,110 [wrapper] ==== wrapper stdout END ====
[2026-02-02 03:34:13] 2026-02-02 02:34:13,111 [wrapper] ==== wrapper stderr END ====
[2026-02-02 03:34:13]  *** Error codes and diagnostics ***
[2026-02-02 03:34:13]     "exeErrorCode": 0,
[2026-02-02 03:34:13]     "exeErrorDiag": "",
[2026-02-02 03:34:13]     "pilotErrorCode": 0,
[2026-02-02 03:34:13]     "pilotErrorDiag": "",
[2026-02-02 03:34:13]  *** Listing of results directory ***
[2026-02-02 03:34:13] total 951212
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user    584422 Feb  1 16:06 pilot3.tar.gz
[2026-02-02 03:34:13] -rwx------ 1 mf493845 unix-user     36322 Feb  1 16:09 runpilot2-wrapper.sh
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user      5111 Feb  1 16:12 queuedata.json
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user       100 Feb  2 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 03:34:13] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb  2 00:19 run_atlas
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user       105 Feb  2 00:19 job.xml
[2026-02-02 03:34:13] -rw-r--r-- 2 mf493845 unix-user 681879586 Feb  2 02:24 EVNT.48431094._000035.pool.root.1
[2026-02-02 03:34:13] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  2 02:24 start_atlas.sh
[2026-02-02 03:34:13] drwxrwx--x 2 mf493845 unix-user       100 Feb  2 02:24 shared
[2026-02-02 03:34:13] -rw-r--r-- 2 mf493845 unix-user    597768 Feb  2 02:24 input.tar.gz
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user      6390 Feb  2 02:24 init_data.xml
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user         0 Feb  2 02:24 boinc_setup_complete
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user      8192 Feb  2 02:24 boinc_mmap_file
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user         0 Feb  2 02:24 boinc_lockfile
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user      2554 Feb  2 02:24 pandaJob.out
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user   1009765 Feb  2 02:24 agis_schedconf.cvmfs.json
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user   1511668 Feb  2 02:24 agis_ddmendpoints.agis.ALL.json
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user       415 Feb  2 02:24 workernode_map.json
[2026-02-02 03:34:13] drwx------ 5 mf493845 unix-user       440 Feb  2 02:25 pilot3
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user 286320322 Feb  2 03:33 HITS.48431096._001800.pool.root.1
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user      1018 Feb  2 03:33 memory_monitor_summary.json
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user    333159 Feb  2 03:33 log.48431096._001800.job.log.tgz.1
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user      6305 Feb  2 03:33 heartbeat.json
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user        95 Feb  2 03:34 pilot_heartbeat.json
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user      5087 Feb  2 03:34 pilotlog.txt
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user    627668 Feb  2 03:34 log.48431096._001800.job.log.1
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user       357 Feb  2 03:34 output.list
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user       620 Feb  2 03:34 runtime_log
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user    983040 Feb  2 03:34 result.tar.gz
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user      9219 Feb  2 03:34 runtime_log.err
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user       642 Feb  2 03:34 7xNLDmDGo68n9Rq4apOajLDm4fhM0noT9bVooX4SDmtHQKDm5PEson.diag
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user     22296 Feb  2 03:34 stderr.txt
[2026-02-02 03:34:13] HITS file was successfully produced:
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user 286320322 Feb  2 03:33 shared/HITS.pool.root.1
[2026-02-02 03:34:13]  *** Contents of shared directory: ***
[2026-02-02 03:34:13] total 947072
[2026-02-02 03:34:13] -rw-r--r-- 2 mf493845 unix-user 681879586 Feb  2 02:24 ATLAS.root_0
[2026-02-02 03:34:13] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  2 02:24 start_atlas.sh
[2026-02-02 03:34:13] -rw-r--r-- 2 mf493845 unix-user    597768 Feb  2 02:24 input.tar.gz
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user 286320322 Feb  2 03:33 HITS.pool.root.1
[2026-02-02 03:34:13] -rw------- 1 mf493845 unix-user    983040 Feb  2 03:34 result.tar.gz
03:34:14 (25835): run_atlas exited; CPU time 30337.942568
03:34:14 (25835): called boinc_finish(0)

</stderr_txt>
]]>

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