Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:15:44 (1014676): wrapper (7.7.26015): starting
07:15:44 (1014676): wrapper: running run_atlas (--nthreads 3)
[2026-02-02 07:15:44] Arguments: --nthreads 3
[2026-02-02 07:15:44] Threads: 3
[2026-02-02 07:15:44] Checking for CVMFS
[2026-02-02 07:15:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 07:15:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 07:15:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 07:15:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 07:15:44] 2.9.2.0 4027610 6837 87008 155777 3 9 25201837 36864001 0 130560 0 3081805 99.987 216561 13806 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 07:15:44] CVMFS is ok
[2026-02-02 07:15:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 07:15:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 07:15:44] Further information can be found at the LHC@home message board.
[2026-02-02 07:15:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 07:15:44] Checking for apptainer binary...
[2026-02-02 07:15:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 07:15:44] Running /usr/bin/apptainer --version
[2026-02-02 07:15:44] apptainer version 1.4.1-1.1
[2026-02-02 07:15:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 07:15:44] magicA246a
[2026-02-02 07:15:44] apptainer works
[2026-02-02 07:15:44] Set ATHENA_PROC_NUMBER=3
[2026-02-02 07:15:44] Set ATHENA_CORE_NUMBER=3
[2026-02-02 07:15:44] Starting ATLAS job with PandaID=6991818609
[2026-02-02 07:15:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 08:37:09]  *** The last 200 lines of the pilot log: ***
[2026-02-02 08:37:09] 2026-02-02 07:36:20,873 | INFO     | [data] copytool_out thread has finished
[2026-02-02 08:37:09] 2026-02-02 07:36:20,909 | INFO     | [job] validate thread has finished
[2026-02-02 08:37:09] 2026-02-02 07:36:20,936 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 08:37:09] 2026-02-02 07:36:20,983 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 08:37:09] 2026-02-02 07:36:21,088 | INFO     | [data] copytool_in thread has finished
[2026-02-02 08:37:09] 2026-02-02 07:36:21,471 | INFO     | [job] control thread has finished
[2026-02-02 08:37:09] 2026-02-02 07:36:21,637 | WARNING  | process 1023141 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 08:37:09] 2026-02-02 07:36:21,677 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 08:37:09] 2026-02-02 07:36:21,728 | INFO     | number of running child processes to parent process 1023141: 1
[2026-02-02 08:37:09] 2026-02-02 07:36:21,729 | INFO     | maximum number of monitored processes: 6
[2026-02-02 08:37:09] 2026-02-02 07:36:21,729 | INFO     | aborting job monitoring since job object (job id=6991818609) has expired
[2026-02-02 08:37:09] 2026-02-02 07:36:21,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 08:37:09] 2026-02-02 07:36:21,729 | INFO     | will abort loop
[2026-02-02 08:37:09] 2026-02-02 07:36:22,734 | INFO     | [job] job monitor thread has finished
[2026-02-02 08:37:09] 2026-02-02 07:36:22,874 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 08:37:09] 2026-02-02 07:36:29,257 | INFO     | job.realtimelogging is not enabled
[2026-02-02 08:37:09] 2026-02-02 07:36:30,262 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 08:37:09] 2026-02-02 07:36:50,001 | INFO     | PID=1018719 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 08:37:09] 2026-02-02 07:36:50,002 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 08:37:09] 2026-02-02 07:36:50,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 08:37:09] 2026-02-02 07:36:50,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 08:37:09] 2026-02-02 07:37:02,118 | INFO     | [monitor] cgroup control has ended
[2026-02-02 08:37:09] 2026-02-02 07:37:03,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935443908416)>', '<ExcThread(monitor, started 139935101204224)>']
[2026-02-02 08:37:09] 2026-02-02 07:37:04,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 08:37:09] 2026-02-02 07:37:04,070 | INFO     | [monitor] control thread has ended
[2026-02-02 08:37:09] 2026-02-02 07:37:08,895 | INFO     | all workflow threads have been joined
[2026-02-02 08:37:09] 2026-02-02 07:37:08,895 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 08:37:09] 2026-02-02 07:37:08,895 | INFO     | traces error code: 0
[2026-02-02 08:37:09] 2026-02-02 07:37:08,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 08:37:09] 2026-02-02 07:37:08,949 [wrapper] ==== pilot stdout END ====
[2026-02-02 08:37:09] 2026-02-02 07:37:08,951 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 08:37:09] 2026-02-02 07:37:08,953 [wrapper] pilotpid: 1018719
[2026-02-02 08:37:09] 2026-02-02 07:37:08,956 [wrapper] Pilot exit status: 0
[2026-02-02 08:37:09] 2026-02-02 07:37:08,963 [wrapper] pandaids: 6991818609
[2026-02-02 08:37:09] 2026-02-02 07:37:08,982 [wrapper] cleanup supervisor_pilot 1029502 1018720
[2026-02-02 08:37:09] 2026-02-02 07:37:08,984 [wrapper] Test setup, not cleaning
[2026-02-02 08:37:09] 2026-02-02 07:37:08,986 [wrapper] apfmon messages muted
[2026-02-02 08:37:09] 2026-02-02 07:37:08,988 [wrapper] ==== wrapper stdout END ====
[2026-02-02 08:37:09] 2026-02-02 07:37:08,991 [wrapper] ==== wrapper stderr END ====
[2026-02-02 08:37:09]  *** Error codes and diagnostics ***
[2026-02-02 08:37:09]     "exeErrorCode": 0,
[2026-02-02 08:37:09]     "exeErrorDiag": "",
[2026-02-02 08:37:09]     "pilotErrorCode": 0,
[2026-02-02 08:37:09]     "pilotErrorDiag": "",
[2026-02-02 08:37:09]  *** Listing of results directory ***
[2026-02-02 08:37:09] total 666140
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc    584422 Feb  1 13:55 pilot3.tar.gz
[2026-02-02 08:37:09] -rwx------ 1 boinc boinc     36322 Feb  1 13:58 runpilot2-wrapper.sh
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc      5111 Feb  1 14:00 queuedata.json
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc       100 Feb  2 07:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 08:37:09] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 07:15 run_atlas
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc       105 Feb  2 07:15 job.xml
[2026-02-02 08:37:09] -rw-r--r-- 2 boinc boinc 496068830 Feb  2 07:15 EVNT.48318008._000014.pool.root.1
[2026-02-02 08:37:09] -rw-r--r-- 2 boinc boinc    597764 Feb  2 07:15 input.tar.gz
[2026-02-02 08:37:09] -rw-r--r-- 2 boinc boinc     15845 Feb  2 07:15 start_atlas.sh
[2026-02-02 08:37:09] drwxrwx--x 2 boinc boinc      4096 Feb  2 07:15 shared
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc         0 Feb  2 07:15 boinc_setup_complete
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc      6447 Feb  2 07:15 init_data.xml
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc         0 Feb  2 07:15 boinc_lockfile
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc      2523 Feb  2 07:15 pandaJob.out
[2026-02-02 08:37:09] -rw------- 1 boinc boinc   1009823 Feb  2 07:15 agis_schedconf.cvmfs.json
[2026-02-02 08:37:09] -rw------- 1 boinc boinc   1511668 Feb  2 07:15 agis_ddmendpoints.agis.ALL.json
[2026-02-02 08:37:09] -rw------- 1 boinc boinc       427 Feb  2 07:15 workernode_map.json
[2026-02-02 08:37:09] drwx------ 5 boinc boinc      4096 Feb  2 07:15 pilot3
[2026-02-02 08:37:09] -rw------- 1 boinc boinc 180164339 Feb  2 08:36 HITS.48318010._007711.pool.root.1
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc       530 Feb  2 08:36 boinc_task_state.xml
[2026-02-02 08:37:09] -rw------- 1 boinc boinc      1023 Feb  2 08:36 memory_monitor_summary.json
[2026-02-02 08:37:09] -rw------- 1 boinc boinc    272739 Feb  2 08:36 log.48318010._007711.job.log.tgz.1
[2026-02-02 08:37:09] -rw------- 1 boinc boinc      6307 Feb  2 08:36 heartbeat.json
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc      8192 Feb  2 08:36 boinc_mmap_file
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc        27 Feb  2 08:36 wrapper_checkpoint.txt
[2026-02-02 08:37:09] -rw------- 1 boinc boinc        95 Feb  2 08:36 pilot_heartbeat.json
[2026-02-02 08:37:09] -rw------- 1 boinc boinc      5344 Feb  2 08:37 pilotlog.txt
[2026-02-02 08:37:09] -rw------- 1 boinc boinc    708873 Feb  2 08:37 log.48318010._007711.job.log.1
[2026-02-02 08:37:09] -rw------- 1 boinc boinc       357 Feb  2 08:37 output.list
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc       620 Feb  2 08:37 runtime_log
[2026-02-02 08:37:09] -rw------- 1 boinc boinc   1003520 Feb  2 08:37 result.tar.gz
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc      8916 Feb  2 08:37 runtime_log.err
[2026-02-02 08:37:09] -rw------- 1 boinc boinc       661 Feb  2 08:37 4SjLDmaDm68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2RQKDmMwWFsm.diag
[2026-02-02 08:37:09] -rw-r--r-- 1 boinc boinc      6537 Feb  2 08:37 stderr.txt
[2026-02-02 08:37:09] HITS file was successfully produced:
[2026-02-02 08:37:09] -rw------- 1 boinc boinc 180164339 Feb  2 08:36 shared/HITS.pool.root.1
[2026-02-02 08:37:09]  *** Contents of shared directory: ***
[2026-02-02 08:37:09] total 661976
[2026-02-02 08:37:09] -rw-r--r-- 2 boinc boinc 496068830 Feb  2 07:15 ATLAS.root_0
[2026-02-02 08:37:09] -rw-r--r-- 2 boinc boinc    597764 Feb  2 07:15 input.tar.gz
[2026-02-02 08:37:09] -rw-r--r-- 2 boinc boinc     15845 Feb  2 07:15 start_atlas.sh
[2026-02-02 08:37:09] -rw------- 1 boinc boinc 180164339 Feb  2 08:36 HITS.pool.root.1
[2026-02-02 08:37:09] -rw------- 1 boinc boinc   1003520 Feb  2 08:37 result.tar.gz
08:37:10 (1014676): run_atlas exited; CPU time 13867.615616
08:37:10 (1014676): called boinc_finish(0)

</stderr_txt>
]]>

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