Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:12:15 (2115323): wrapper (7.7.26015): starting
17:12:15 (2115323): wrapper: running run_atlas (--nthreads 8)
[2026-02-01 17:12:15] Arguments: --nthreads 8
[2026-02-01 17:12:15] Threads: 8
[2026-02-01 17:12:15] Checking for CVMFS
[2026-02-01 17:12:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 17:12:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 17:12:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 17:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 17:12:15] 2.11.3.0 733561 125630 245200 155768 1 789 44845293 45568000 12034 130560 0 738211775 99.810 434874869 20276 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-02-01 17:12:15] CVMFS is ok
[2026-02-01 17:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 17:12:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 17:12:15] Further information can be found at the LHC@home message board.
[2026-02-01 17:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 17:12:15] Checking for apptainer binary...
[2026-02-01 17:12:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 17:12:15] Running /usr/bin/apptainer --version
[2026-02-01 17:12:15] apptainer version 1.4.1-1.el9
[2026-02-01 17:12:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 17:12:16] wns0024.triumf.lcg
[2026-02-01 17:12:16] apptainer works
[2026-02-01 17:12:16] Set ATHENA_PROC_NUMBER=8
[2026-02-01 17:12:16] Set ATHENA_CORE_NUMBER=8
[2026-02-01 17:12:16] Starting ATLAS job with PandaID=6996291640
[2026-02-01 17:12:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 17:16:07]  *** The last 200 lines of the pilot log: ***
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | WARNING  | found no stored workdir sizes
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | INFO     | will not add max space = 0 B to job metrics
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | WARNING  | wrong length of table data, x=[1769994794.0], y=[852.0] (must be same and length>=4)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | ..............................
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . Timing measurements:
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . get job = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . initial setup = 15 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . payload setup = 8 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . stage-in = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . payload execution = 26 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | . stage-out = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | . log creation = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | ..............................
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996291640/pilotlog.txt
[2026-02-01 17:16:07] 2026-02-02 01:15:34,272 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-01 17:16:07] - Log from pilotlog.txt -
[2026-02-01 17:16:07] 2026-02-02 01:15:34,116 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 17:16:07] 2026-02-02 01:15:34,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | WARNING  | found no stored workdir sizes
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | INFO     | will not add max space = 0 B to job metrics
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | WARNING  | wrong length of table data, x=[1769994794.0], y=[852.0] (must be same and length>=4)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | ..............................
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . Timing measurements:
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . get job = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . initial setup = 15 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . payload setup = 8 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . stage-in = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . payload execution = 26 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | . stage-out = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | . log creation = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | ..............................
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996291640/pilotlog.txt
[2026-02-01 17:16:07] 2026-02-02 01:15:34,272 | WARNING  | 
[2026-02-01 17:16:07] [begin log extracts]
[2026-02-01 17:16:07] - Log from pilotlog.txt -
[2026-02-01 17:16:07] 2026-02-02 01:15:34,116 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 17:16:07] 2026-02-02 01:15:34,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | WARNING  | found no stored workdir sizes
[2026-02-01 17:16:07] 2026-02-02 01:15:34,117 | INFO     | will not add max space = 0 B to job metrics
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | WARNING  | wrong length of table data, x=[1769994794.0], y=[852.0] (must be same and length>=4)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | ..............................
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . Timing measurements:
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . get job = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . initial setup = 15 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . payload setup = 8 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . stage-in = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,118 | INFO     | . payload execution = 26 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | . stage-out = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | . log creation = 0 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | ..............................
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-01 17:16:07] 2026-02-02 01:15:34,119 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996291640/pilotlog.txt
[2026-02-01 17:16:07] [end log extracts]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,273 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,274 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-01 17:16:07] 2026-02-02 01:15:34,397 | INFO     | 
[2026-02-01 17:16:07] 2026-02-02 01:15:34,397 | INFO     | job summary report
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | --------------------------------------------------
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | PanDA job id: 6996291640
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | task id: 48310589
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-01 17:13:28,425 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | pilot state: failed 
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | transexitcode: 65
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | exeerrorcode: 65
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | exitcode: 65
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | cpuconsumptiontime: 14 s
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | nevents: 0
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | neventsw: 0
[2026-02-01 17:16:07] 2026-02-02 01:15:34,398 | INFO     | pid: 2130385
[2026-02-01 17:16:07] 2026-02-02 01:15:34,399 | INFO     | pgrp: 2130385
[2026-02-01 17:16:07] 2026-02-02 01:15:34,399 | INFO     | corecount: 8
[2026-02-01 17:16:07] 2026-02-02 01:15:34,399 | INFO     | event service: False
[2026-02-01 17:16:07] 2026-02-02 01:15:34,399 | INFO     | sizes: {0: 2254465, 1: 2278279, 11: 2278307, 39: 2301467, 40: 2305759, 41: 2305787, 156: 2306081}
[2026-02-01 17:16:07] 2026-02-02 01:15:34,399 | INFO     | --------------------------------------------------
[2026-02-01 17:16:07] 2026-02-02 01:15:34,399 | INFO     | 
[2026-02-01 17:16:07] 2026-02-02 01:15:34,399 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-01 17:16:07] 2026-02-02 01:15:34,417 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,417 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,417 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,417 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,418 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,419 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 17:16:07] 2026-02-02 01:15:34,419 | INFO     | job 6996291640 has completed (purged errors)
[2026-02-01 17:16:07] 2026-02-02 01:15:34,419 | INFO     | overall cleanup function is called
[2026-02-01 17:16:07] 2026-02-02 01:15:35,425 | INFO     | --- collectZombieJob: --- 10, [2130385]
[2026-02-01 17:16:07] 2026-02-02 01:15:35,425 | INFO     | zombie collector waiting for pid 2130385
[2026-02-01 17:16:07] 2026-02-02 01:15:35,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 17:16:07] 2026-02-02 01:15:35,425 | INFO     | collected zombie processes
[2026-02-01 17:16:07] 2026-02-02 01:15:35,425 | INFO     | will attempt to kill all subprocesses of pid=2130385
[2026-02-01 17:16:07] 2026-02-02 01:15:35,740 | INFO     | process IDs to be killed: [2130385] (in reverse order)
[2026-02-01 17:16:07] 2026-02-02 01:15:36,006 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 17:16:07] 2026-02-02 01:15:36,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 17:16:07] 2026-02-02 01:15:36,012 | INFO     | did not find any defunct processes belonging to 2130385
[2026-02-01 17:16:07] 2026-02-02 01:15:36,017 | INFO     | did not find any defunct processes belonging to 2130385
[2026-02-01 17:16:07] 2026-02-02 01:15:36,017 | INFO     | ready for new job
[2026-02-01 17:16:07] 2026-02-02 01:15:36,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 17:16:07] 2026-02-02 01:15:36,019 | INFO     | **************************************
[2026-02-01 17:16:07] 2026-02-02 01:15:36,019 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 17:16:07] 2026-02-02 01:15:36,019 | INFO     | **************************************
[2026-02-01 17:16:07] 2026-02-02 01:15:36,019 | INFO     | 
[2026-02-01 17:16:07] 2026-02-02 01:15:36,020 | INFO     | architecture information:
[2026-02-01 17:16:07] 2026-02-02 01:15:36,021 | INFO     | executing command: cat /etc/os-release
[2026-02-01 17:16:07] 2026-02-02 01:15:36,033 | INFO     | cat /etc/os-release:
[2026-02-01 17:16:07] NAME="CentOS Linux"
[2026-02-01 17:16:07] VERSION="7 (Core)"
[2026-02-01 17:16:07] ID="centos"
[2026-02-01 17:16:07] ID_LIKE="rhel fedora"
[2026-02-01 17:16:07] VERSION_ID="7"
[2026-02-01 17:16:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 17:16:07] ANSI_COLOR="0;31"
[2026-02-01 17:16:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 17:16:07] HOME_URL="https://www.centos.org/"
[2026-02-01 17:16:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 17:16:07] 
[2026-02-01 17:16:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 17:16:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 17:16:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 17:16:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 17:16:07] 
[2026-02-01 17:16:07] 2026-02-02 01:15:36,033 | INFO     | **************************************
[2026-02-01 17:16:07] 2026-02-02 01:15:36,536 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-01 17:16:07] 2026-02-02 01:15:36,551 | INFO     | sufficient remaining disk space (1403801042944 B)
[2026-02-01 17:16:07] 2026-02-02 01:15:36,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 17:16:07] 2026-02-02 01:15:36,552 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 17:16:07] 2026-02-02 01:15:36,552 | INFO     | update_server=False
[2026-02-01 17:16:07] 2026-02-02 01:15:36,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 17:16:07] 2026-02-02 01:15:36,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:16:07] 2026-02-02 01:15:36,552 | INFO     | aborting loop
[2026-02-01 17:16:07] 2026-02-02 01:15:37,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 17:16:07] 2026-02-02 01:15:37,048 | INFO     | all payload control threads have been joined
[2026-02-01 17:16:07] 2026-02-02 01:15:37,186 | INFO     | all data control threads have been joined
[2026-02-01 17:16:07] 2026-02-02 01:15:37,333 | INFO     | all job control threads have been joined
[2026-02-01 17:16:07] 2026-02-02 01:15:37,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 17:16:07] 2026-02-02 01:15:37,557 | INFO     | [job] retrieve thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:37,558 | INFO     | [job] job monitor thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:37,630 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:38,054 | INFO     | [payload] control thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:38,191 | INFO     | [data] control thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:38,203 | INFO     | [job] validate thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:38,266 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:38,339 | INFO     | [job] control thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:38,363 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:38,546 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:38,690 | INFO     | [payload] failed_post thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:38,930 | INFO     | [data] copytool_in thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:39,023 | INFO     | [data] copytool_out thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:39,085 | INFO     | [payload] validate_post thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:39,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:16:07] 2026-02-02 01:15:40,416 | INFO     | [job] queue monitor thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:41,525 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 17:16:07] 2026-02-02 01:15:46,437 | INFO     | [monitor] cgroup control has ended
[2026-02-01 17:16:07] 2026-02-02 01:15:48,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491991893824)>', '<ExcThread(monitor, started 140491316254464)>']
[2026-02-01 17:16:07] 2026-02-02 01:15:53,066 | INFO     | all workflow threads have been joined
[2026-02-01 17:16:07] 2026-02-02 01:15:53,066 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 17:16:07] 2026-02-02 01:15:53,067 | INFO     | traces error code: 0
[2026-02-01 17:16:07] 2026-02-02 01:15:53,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 17:16:07] 2026-02-02 01:16:06,494 | INFO     | PID=2121874 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 17:16:07] 2026-02-02 01:16:06,494 | INFO     | .. there are 18 such processes running
[2026-02-01 17:16:07] 2026-02-02 01:16:06,494 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 17:16:07] 2026-02-02 01:16:06,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 17:16:07] 2026-02-02 01:16:06,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 17:16:07] 2026-02-02 01:16:06,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 17:16:07] 2026-02-02 01:16:06,495 | CRITICAL | thread 'MainThread' is not alive
[2026-02-01 17:16:07] 2026-02-02 01:16:06,495 | INFO     | [monitor] control thread has ended
[2026-02-01 17:16:07] 2026-02-02 01:16:06,726 [wrapper] ==== pilot stdout END ====
[2026-02-01 17:16:07] 2026-02-02 01:16:06,731 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 17:16:07] 2026-02-02 01:16:06,744 [wrapper] pilotpid: 2121874
[2026-02-01 17:16:07] 2026-02-02 01:16:06,750 [wrapper] Pilot exit status: 0
[2026-02-01 17:16:07] 2026-02-02 01:16:06,832 [wrapper] pandaids: 6996291640
[2026-02-01 17:16:07] 2026-02-02 01:16:06,881 [wrapper] cleanup supervisor_pilot 2121890 2121875
[2026-02-01 17:16:07] 2026-02-02 01:16:06,883 [wrapper] Test setup, not cleaning
[2026-02-01 17:16:07] 2026-02-02 01:16:06,885 [wrapper] apfmon messages muted
[2026-02-01 17:16:07] 2026-02-02 01:16:06,887 [wrapper] ==== wrapper stdout END ====
[2026-02-01 17:16:07] 2026-02-02 01:16:06,888 [wrapper] ==== wrapper stderr END ====
[2026-02-01 17:16:07]  *** Error codes and diagnostics ***
[2026-02-01 17:16:07]     "exeErrorCode": 65,
[2026-02-01 17:16:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-01 17:16:07]     "pilotErrorCode": 1305,
[2026-02-01 17:16:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-01 17:16:07]  *** Listing of results directory ***
[2026-02-01 17:16:07] total 487684
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc    584422 Feb  1 11:04 pilot3.tar.gz
[2026-02-01 17:16:07] -rwx------. 1 boinc boinc     36322 Feb  1 11:07 runpilot2-wrapper.sh
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc      5111 Feb  1 11:09 queuedata.json
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc       100 Feb  1 17:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 17:16:07] -rwxr-xr-x. 1 boinc boinc      7986 Feb  1 17:12 run_atlas
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc       105 Feb  1 17:12 job.xml
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc      6444 Feb  1 17:12 init_data.xml
[2026-02-01 17:16:07] -rw-r--r--. 2 boinc boinc 495254841 Feb  1 17:12 EVNT.48310585._000205.pool.root.1
[2026-02-01 17:16:07] -rw-r--r--. 2 boinc boinc     15845 Feb  1 17:12 start_atlas.sh
[2026-02-01 17:16:07] drwxrwx--x. 2 boinc boinc      4096 Feb  1 17:12 shared
[2026-02-01 17:16:07] -rw-r--r--. 2 boinc boinc    597757 Feb  1 17:12 input.tar.gz
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc         0 Feb  1 17:12 boinc_lockfile
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc      2531 Feb  1 17:12 pandaJob.out
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc   1009765 Feb  1 17:12 agis_schedconf.cvmfs.json
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc   1511668 Feb  1 17:12 agis_ddmendpoints.agis.ALL.json
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc       437 Feb  1 17:12 workernode_map.json
[2026-02-01 17:16:07] drwx------. 5 boinc boinc      4096 Feb  1 17:12 pilot3
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc       522 Feb  1 17:13 boinc_task_state.xml
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc       956 Feb  1 17:13 memory_monitor_summary.json
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc     21158 Feb  1 17:13 log.48310589._010805.job.log.tgz.1
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc        95 Feb  1 17:15 pilot_heartbeat.json
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc      6999 Feb  1 17:15 heartbeat.json
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc      8192 Feb  1 17:16 boinc_mmap_file
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc        22 Feb  1 17:16 wrapper_checkpoint.txt
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc       893 Feb  1 17:16 pilotlog.txt
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc     81332 Feb  1 17:16 log.48310589._010805.job.log.1
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc       188 Feb  1 17:16 output.list
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc       620 Feb  1 17:16 runtime_log
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc    122880 Feb  1 17:16 result.tar.gz
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc      8633 Feb  1 17:16 runtime_log.err
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc       644 Feb  1 17:16 ciIKDm6xr68n9Rq4apOajLDm4fhM0noT9bVooX4SDmlkQKDmZrCTwm.diag
[2026-02-01 17:16:07] -rw-r--r--. 1 boinc boinc     21618 Feb  1 17:16 stderr.txt
[2026-02-01 17:16:07] No HITS result produced
[2026-02-01 17:16:07]  *** Contents of shared directory: ***
[2026-02-01 17:16:07] total 484368
[2026-02-01 17:16:07] -rw-r--r--. 2 boinc boinc 495254841 Feb  1 17:12 ATLAS.root_0
[2026-02-01 17:16:07] -rw-r--r--. 2 boinc boinc     15845 Feb  1 17:12 start_atlas.sh
[2026-02-01 17:16:07] -rw-r--r--. 2 boinc boinc    597757 Feb  1 17:12 input.tar.gz
[2026-02-01 17:16:07] -rw-------. 1 boinc boinc    122880 Feb  1 17:16 result.tar.gz
17:16:08 (2115323): run_atlas exited; CPU time 19.610883
17:16:08 (2115323): called boinc_finish(0)

</stderr_txt>
]]>

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