Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:38:28 (875495): wrapper (7.7.26015): starting
22:38:28 (875495): wrapper: running run_atlas (--nthreads 6)
[2026-02-02 22:38:28] Arguments: --nthreads 6
[2026-02-02 22:38:28] Threads: 6
[2026-02-02 22:38:28] Checking for CVMFS
[2026-02-02 22:38:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 22:38:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 22:38:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 22:38:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 22:38:42] 2.13.3.0 875714 0 29560 155788 3 1 41505124 52428801 0 130560 0 0 0.000 1336 292 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-02 22:38:42] CVMFS is ok
[2026-02-02 22:38:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 22:38:42] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-02 22:38:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-02 22:38:42] Further information can be found at the LHC@home message board.
[2026-02-02 22:38:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 22:38:42] Checking for apptainer binary...
[2026-02-02 22:38:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 22:38:42] Running /usr/bin/apptainer --version
[2026-02-02 22:38:42] apptainer version 1.4.5-2.el9
[2026-02-02 22:38:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 22:38:42] Atto003
[2026-02-02 22:38:42] apptainer works
[2026-02-02 22:38:42] Set ATHENA_PROC_NUMBER=6
[2026-02-02 22:38:42] Set ATHENA_CORE_NUMBER=6
[2026-02-02 22:38:42] Starting ATLAS job with PandaID=6992459260
[2026-02-02 22:38:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 00:57:52]  *** The last 200 lines of the pilot log: ***
[2026-02-03 00:57:52] 2026-02-02 15:56:52,996 | INFO     | maximum number of monitored processes: 6
[2026-02-03 00:57:52] 2026-02-02 15:56:53,921 | INFO     | time since job start (8242s) is within the limit (349056.0s)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,160 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-03 00:57:52] 2026-02-02 15:56:54,549 | INFO     | job 6992459260 has state=finished
[2026-02-03 00:57:52] 2026-02-02 15:56:54,549 | INFO     | preparing for final server update for job 6992459260 in state='finished'
[2026-02-03 00:57:52] 2026-02-02 15:56:54,550 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-6992459260/jobReport.json
[2026-02-03 00:57:52] 2026-02-02 15:56:54,551 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-02-03 00:57:52] 2026-02-02 15:56:54,551 | INFO     | this job has now completed (state=finished)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,551 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,552 | INFO     | log transfer has been attempted: DONE
[2026-02-03 00:57:52] 2026-02-02 15:56:54,552 | INFO     | job 6992459260 has finished - writing final server update
[2026-02-03 00:57:52] 2026-02-02 15:56:54,552 | INFO     | total number of processed events: 400 (read)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,554 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6992459260/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,555 | INFO     | extracted standard info from prmon json
[2026-02-03 00:57:52] 2026-02-02 15:56:54,555 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 00:57:52] 2026-02-02 15:56:54,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 00:57:52] 2026-02-02 15:56:54,555 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 00:57:52] 2026-02-02 15:56:54,555 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 00:57:52] 2026-02-02 15:56:54,557 | INFO     | fitting pss+swap vs Time
[2026-02-03 00:57:52] 2026-02-02 15:56:54,557 | INFO     | sum of square deviations: 762879420.0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,558 | INFO     | sum of deviations: -15122780169.00001
[2026-02-03 00:57:52] 2026-02-02 15:56:54,558 | INFO     | mean x: 1770043679.0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,558 | INFO     | mean y: 2590528.6740740743
[2026-02-03 00:57:52] 2026-02-02 15:56:54,558 | INFO     | intersect: 35090680134.03401
[2026-02-03 00:57:52] 2026-02-02 15:56:54,558 | INFO     | chi2: 1.9304687836281018
[2026-02-03 00:57:52] 2026-02-02 15:56:54,558 | INFO     | sum of square deviations: 681212772.5
[2026-02-03 00:57:52] 2026-02-02 15:56:54,559 | INFO     | sum of deviations: -13832897745.500008
[2026-02-03 00:57:52] 2026-02-02 15:56:54,559 | INFO     | mean x: 1770043526.5
[2026-02-03 00:57:52] 2026-02-02 15:56:54,559 | INFO     | mean y: 2592938.4384615384
[2026-02-03 00:57:52] 2026-02-02 15:56:54,559 | INFO     | intersect: 35945593562.60649
[2026-02-03 00:57:52] 2026-02-02 15:56:54,559 | INFO     | chi2: 1.9285741109547776
[2026-02-03 00:57:52] 2026-02-02 15:56:54,560 | INFO     | current chi2=1.9285741109547776 (change=0.09814572964828723 %)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,560 | INFO     | right removable region: 129
[2026-02-03 00:57:52] 2026-02-02 15:56:54,560 | INFO     | sum of square deviations: 681212772.5
[2026-02-03 00:57:52] 2026-02-02 15:56:54,560 | INFO     | sum of deviations: -37586854034.999985
[2026-02-03 00:57:52] 2026-02-02 15:56:54,560 | INFO     | mean x: 1770043831.5
[2026-02-03 00:57:52] 2026-02-02 15:56:54,560 | INFO     | mean y: 2631780.6
[2026-02-03 00:57:52] 2026-02-02 15:56:54,561 | INFO     | intersect: 97667240865.92453
[2026-02-03 00:57:52] 2026-02-02 15:56:54,561 | INFO     | chi2: 0.2414565377645403
[2026-02-03 00:57:52] 2026-02-02 15:56:54,561 | INFO     | current chi2=0.2414565377645403 (change=87.49233658620733 %)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,561 | INFO     | sum of square deviations: 605592750.0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,561 | INFO     | sum of deviations: -34225854318.999996
[2026-02-03 00:57:52] 2026-02-02 15:56:54,562 | INFO     | mean x: 1770043984.0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,562 | INFO     | mean y: 2624929.528
[2026-02-03 00:57:52] 2026-02-02 15:56:54,562 | INFO     | intersect: 100038940645.99977
[2026-02-03 00:57:52] 2026-02-02 15:56:54,562 | INFO     | chi2: 0.23425211626868134
[2026-02-03 00:57:52] 2026-02-02 15:56:54,562 | INFO     | current chi2=0.23425211626868134 (change=2.983734283013884 %)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,562 | INFO     | left removable region: 20
[2026-02-03 00:57:52] 2026-02-02 15:56:54,562 | INFO     | sum of square deviations: 401533110.0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,563 | INFO     | sum of deviations: -21935520090.000004
[2026-02-03 00:57:52] 2026-02-02 15:56:54,563 | INFO     | mean x: 1770044106.0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,563 | INFO     | mean y: 2604309.247706422
[2026-02-03 00:57:52] 2026-02-02 15:56:54,563 | INFO     | intersect: 96699083579.28624
[2026-02-03 00:57:52] 2026-02-02 15:56:54,563 | INFO     | chi2: 0.21149834860915553
[2026-02-03 00:57:52] 2026-02-02 15:56:54,563 | INFO     | current memory leak: -54.63 B/s (using 109 data points, chi2=0.21)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,563 | INFO     | could have reported an average CPU frequency of 3500 MHz (8 samples)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | ..............................
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | . Timing measurements:
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | . get job = 0 s
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | . initial setup = 13 s
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | . payload setup = 5 s
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | . stage-in = 0 s
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | . payload execution = 8218 s
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | . stage-out = 0 s
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | . log creation = 0 s
[2026-02-03 00:57:52] 2026-02-02 15:56:54,564 | INFO     | ..............................
[2026-02-03 00:57:52] 2026-02-02 15:56:54,634 | INFO     | 
[2026-02-03 00:57:52] 2026-02-02 15:56:54,634 | INFO     | job summary report
[2026-02-03 00:57:52] 2026-02-02 15:56:54,634 | INFO     | --------------------------------------------------
[2026-02-03 00:57:52] 2026-02-02 15:56:54,634 | INFO     | PanDA job id: 6992459260
[2026-02-03 00:57:52] 2026-02-02 15:56:54,634 | INFO     | task id: 48431113
[2026-02-03 00:57:52] 2026-02-02 15:56:54,634 | INFO     | errors: (none)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | pilot state: finished 
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | transexitcode: 0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | exeerrorcode: 0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | exeerrordiag: 
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | exitcode: 0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | exitmsg: OK
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | cpuconsumptiontime: 46604 s
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | nevents: 400
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | neventsw: 0
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | pid: 884481
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | pgrp: 884481
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | corecount: 6
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | event service: False
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | sizes: {0: 2277862, 1: 2278323, 11: 2278323, 8227: 2306225, 8229: 2315223, 8231: 2315279, 8232: 2315601}
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | --------------------------------------------------
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | 
[2026-02-03 00:57:52] 2026-02-02 15:56:54,635 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-02-03 00:57:52] 2026-02-02 15:56:54,648 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,648 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,648 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,648 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,649 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 00:57:52] 2026-02-02 15:56:54,650 | INFO     | job 6992459260 has completed (purged errors)
[2026-02-03 00:57:52] 2026-02-02 15:56:54,650 | INFO     | overall cleanup function is called
[2026-02-03 00:57:52] 2026-02-02 15:56:55,656 | INFO     | --- collectZombieJob: --- 10, [884481]
[2026-02-03 00:57:52] 2026-02-02 15:56:55,656 | INFO     | zombie collector waiting for pid 884481
[2026-02-03 00:57:52] 2026-02-02 15:56:55,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 00:57:52] 2026-02-02 15:56:55,656 | INFO     | collected zombie processes
[2026-02-03 00:57:52] 2026-02-02 15:56:55,656 | INFO     | will attempt to kill all subprocesses of pid=884481
[2026-02-03 00:57:52] 2026-02-02 15:56:55,721 | INFO     | process IDs to be killed: [884481] (in reverse order)
[2026-02-03 00:57:52] 2026-02-02 15:56:55,747 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 00:57:52] 2026-02-02 15:56:55,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 00:57:52] 2026-02-02 15:56:55,749 | INFO     | did not find any defunct processes belonging to 884481
[2026-02-03 00:57:52] 2026-02-02 15:56:55,750 | INFO     | did not find any defunct processes belonging to 884481
[2026-02-03 00:57:52] 2026-02-02 15:56:55,750 | INFO     | ready for new job
[2026-02-03 00:57:52] 2026-02-02 15:56:55,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 00:57:52] 2026-02-02 15:56:55,751 | INFO     | **************************************
[2026-02-03 00:57:52] 2026-02-02 15:56:55,751 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 00:57:52] 2026-02-02 15:56:55,751 | INFO     | **************************************
[2026-02-03 00:57:52] 2026-02-02 15:56:55,751 | INFO     | 
[2026-02-03 00:57:52] 2026-02-02 15:56:55,752 | INFO     | architecture information:
[2026-02-03 00:57:52] 2026-02-02 15:56:55,752 | INFO     | executing command: cat /etc/os-release
[2026-02-03 00:57:52] 2026-02-02 15:56:55,760 | INFO     | cat /etc/os-release:
[2026-02-03 00:57:52] NAME="CentOS Linux"
[2026-02-03 00:57:52] VERSION="7 (Core)"
[2026-02-03 00:57:52] ID="centos"
[2026-02-03 00:57:52] ID_LIKE="rhel fedora"
[2026-02-03 00:57:52] VERSION_ID="7"
[2026-02-03 00:57:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 00:57:52] ANSI_COLOR="0;31"
[2026-02-03 00:57:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 00:57:52] HOME_URL="https://www.centos.org/"
[2026-02-03 00:57:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 00:57:52] 
[2026-02-03 00:57:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 00:57:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 00:57:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 00:57:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 00:57:52] 
[2026-02-03 00:57:52] 2026-02-02 15:56:55,760 | INFO     | **************************************
[2026-02-03 00:57:52] 2026-02-02 15:56:56,262 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-02-03 00:57:52] 2026-02-02 15:56:56,270 | INFO     | sufficient remaining disk space (101122572288 B)
[2026-02-03 00:57:52] 2026-02-02 15:56:56,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 00:57:52] 2026-02-02 15:56:56,271 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 00:57:52] 2026-02-02 15:56:56,271 | INFO     | update_server=False
[2026-02-03 00:57:52] 2026-02-02 15:56:56,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 00:57:52] 2026-02-02 15:56:56,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 00:57:52] 2026-02-02 15:56:56,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 00:57:52] 2026-02-02 15:56:56,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 00:57:52] 2026-02-02 15:56:56,503 | INFO     | aborting loop
[2026-02-03 00:57:52] 2026-02-02 15:56:56,741 | INFO     | all job control threads have been joined
[2026-02-03 00:57:52] 2026-02-02 15:56:57,143 | INFO     | all payload control threads have been joined
[2026-02-03 00:57:52] 2026-02-02 15:56:57,187 | INFO     | all data control threads have been joined
[2026-02-03 00:57:52] 2026-02-02 15:56:57,276 | INFO     | [job] queue monitor thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:57,276 | INFO     | [job] retrieve thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:57,365 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:57,509 | INFO     | [job] job monitor thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:57,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 00:57:52] 2026-02-02 15:56:57,658 | INFO     | [payload] validate_post thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:57,746 | INFO     | [job] control thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:57,876 | INFO     | [job] validate thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:57,997 | INFO     | [payload] failed_post thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:58,148 | INFO     | [payload] control thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:58,161 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:58,192 | INFO     | [data] control thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:58,257 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:58,565 | INFO     | [data] copytool_in thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:58,725 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:56:59,602 | INFO     | [data] copytool_out thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:57:00,277 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 00:57:52] 2026-02-02 15:57:27,072 | INFO     | PID=879860 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 00:57:52] 2026-02-02 15:57:27,073 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 00:57:52] 2026-02-02 15:57:27,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 00:57:52] 2026-02-02 15:57:27,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 00:57:52] 2026-02-02 15:57:45,024 | INFO     | [monitor] cgroup control has ended
[2026-02-03 00:57:52] 2026-02-02 15:57:46,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140190811109184)>', '<ExcThread(monitor, started 140190458824448)>']
[2026-02-03 00:57:52] 2026-02-02 15:57:47,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 00:57:52] 2026-02-02 15:57:47,165 | INFO     | [monitor] control thread has ended
[2026-02-03 00:57:52] 2026-02-02 15:57:51,961 | INFO     | all workflow threads have been joined
[2026-02-03 00:57:52] 2026-02-02 15:57:51,962 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 00:57:52] 2026-02-02 15:57:51,962 | INFO     | traces error code: 0
[2026-02-03 00:57:52] 2026-02-02 15:57:51,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 00:57:52] 2026-02-02 15:57:52,038 [wrapper] ==== pilot stdout END ====
[2026-02-03 00:57:52] 2026-02-02 15:57:52,039 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 00:57:52] 2026-02-02 15:57:52,041 [wrapper] pilotpid: 879860
[2026-02-03 00:57:52] 2026-02-02 15:57:52,044 [wrapper] Pilot exit status: 0
[2026-02-03 00:57:52] 2026-02-02 15:57:52,050 [wrapper] pandaids: 6992459260
[2026-02-03 00:57:52] 2026-02-02 15:57:52,082 [wrapper] cleanup supervisor_pilot  889642 879861
[2026-02-03 00:57:52] 2026-02-02 15:57:52,084 [wrapper] Test setup, not cleaning
[2026-02-03 00:57:52] 2026-02-02 15:57:52,085 [wrapper] apfmon messages muted
[2026-02-03 00:57:52] 2026-02-02 15:57:52,087 [wrapper] ==== wrapper stdout END ====
[2026-02-03 00:57:52] 2026-02-02 15:57:52,092 [wrapper] ==== wrapper stderr END ====
[2026-02-03 00:57:52]  *** Error codes and diagnostics ***
[2026-02-03 00:57:52]     "exeErrorCode": 0,
[2026-02-03 00:57:52]     "exeErrorDiag": "",
[2026-02-03 00:57:52]     "pilotErrorCode": 0,
[2026-02-03 00:57:52]     "pilotErrorDiag": "",
[2026-02-03 00:57:52]  *** Listing of results directory ***
[2026-02-03 00:57:52] total 891656
[2026-02-03 00:57:52] -rwx------. 1 boinc boinc     36322 Feb  1 21:59 runpilot2-wrapper.sh
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc    584422 Feb  1 22:02 pilot3.tar.gz
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc      5111 Feb  1 22:03 queuedata.json
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc       100 Feb  2 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 00:57:52] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 22:38 run_atlas
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc       105 Feb  2 22:38 job.xml
[2026-02-03 00:57:52] -rw-r--r--. 2 boinc boinc     15845 Feb  2 22:38 start_atlas.sh
[2026-02-03 00:57:52] drwxrwx--x. 2 boinc boinc        68 Feb  2 22:38 shared
[2026-02-03 00:57:52] -rw-r--r--. 2 boinc boinc    597759 Feb  2 22:38 input.tar.gz
[2026-02-03 00:57:52] -rw-r--r--. 2 boinc boinc 651698213 Feb  2 22:38 EVNT.48431111._000005.pool.root.1
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc         0 Feb  2 22:38 boinc_lockfile
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc      2541 Feb  2 22:38 pandaJob.out
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc   1009833 Feb  2 22:39 agis_schedconf.cvmfs.json
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc   1511668 Feb  2 22:39 agis_ddmendpoints.agis.ALL.json
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc       419 Feb  2 22:39 workernode_map.json
[2026-02-03 00:57:52] drwx------. 5 boinc boinc      4096 Feb  2 22:39 pilot3
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc      9352 Feb  3 00:19 init_data.xml
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc 254347664 Feb  3 00:56 HITS.48431113._000237.pool.root.1
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc       530 Feb  3 00:56 boinc_task_state.xml
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc      1014 Feb  3 00:56 memory_monitor_summary.json
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc    372626 Feb  3 00:56 log.48431113._000237.job.log.tgz.1
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc      6309 Feb  3 00:56 heartbeat.json
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc        95 Feb  3 00:57 pilot_heartbeat.json
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc        27 Feb  3 00:57 wrapper_checkpoint.txt
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc      8192 Feb  3 00:57 boinc_mmap_file
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc      4744 Feb  3 00:57 pilotlog.txt
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc   1171353 Feb  3 00:57 log.48431113._000237.job.log.1
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc       357 Feb  3 00:57 output.list
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc       620 Feb  3 00:57 runtime_log
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc   1556480 Feb  3 00:57 result.tar.gz
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc      8764 Feb  3 00:57 runtime_log.err
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc       640 Feb  3 00:57 CtQMDmZEm68n9Rq4apOajLDm4fhM0noT9bVooX4SDme6PKDmjE9AEm.diag
[2026-02-03 00:57:52] -rw-r--r--. 1 boinc boinc     21299 Feb  3 00:57 stderr.txt
[2026-02-03 00:57:52] HITS file was successfully produced:
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc 254347664 Feb  3 00:56 shared/HITS.pool.root.1
[2026-02-03 00:57:52]  *** Contents of shared directory: ***
[2026-02-03 00:57:52] total 886936
[2026-02-03 00:57:52] -rw-r--r--. 2 boinc boinc     15845 Feb  2 22:38 start_atlas.sh
[2026-02-03 00:57:52] -rw-r--r--. 2 boinc boinc    597759 Feb  2 22:38 input.tar.gz
[2026-02-03 00:57:52] -rw-r--r--. 2 boinc boinc 651698213 Feb  2 22:38 ATLAS.root_0
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc 254347664 Feb  3 00:56 HITS.pool.root.1
[2026-02-03 00:57:52] -rw-------. 1 boinc boinc   1556480 Feb  3 00:57 result.tar.gz
00:57:54 (875495): run_atlas exited; CPU time 46697.089893
00:57:54 (875495): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN