Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:58:31 (1275880): wrapper (7.7.26015): starting
02:58:31 (1275880): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 02:58:31] Arguments: --nthreads 12
[2026-02-02 02:58:31] Threads: 12
[2026-02-02 02:58:31] Checking for CVMFS
[2026-02-02 02:58:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 02:58:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 02:58:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 02:58:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 02:58:33] 2.13.3.0 3927 5884 186480 155769 1 439 38138840 46080001 62015 130560 0 24335391 99.754 15285554 23786 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-02-02 02:58:33] CVMFS is ok
[2026-02-02 02:58:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 02:58:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 02:58:33] Further information can be found at the LHC@home message board.
[2026-02-02 02:58:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 02:58:33] Checking for apptainer binary...
[2026-02-02 02:58:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 02:58:33] Running /usr/bin/apptainer --version
[2026-02-02 02:58:33] apptainer version 1.4.5-2.el9
[2026-02-02 02:58:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 02:58:34] mff2102.farm.particle.cz
[2026-02-02 02:58:34] apptainer works
[2026-02-02 02:58:34] Set ATHENA_PROC_NUMBER=12
[2026-02-02 02:58:34] Set ATHENA_CORE_NUMBER=12
[2026-02-02 02:58:34] Starting ATLAS job with PandaID=6992352989
[2026-02-02 02:58:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 04:47:56]  *** The last 200 lines of the pilot log: ***
[2026-02-02 04:47:56]  filetype=log
[2026-02-02 04:47:56]  guid=05b8ecad-f534-41ad-8f2d-5912182b724f
[2026-02-02 04:47:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 04:47:56]  is_altstaged=None
[2026-02-02 04:47:56]  is_tar=False
[2026-02-02 04:47:56]  lfn=log.48310749._002963.job.log.tgz.1
[2026-02-02 04:47:56]  mtime=0
[2026-02-02 04:47:56]  protocol_id=None
[2026-02-02 04:47:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 04:47:56]  replicas=None
[2026-02-02 04:47:56]  scope=mc23_13p6TeV
[2026-02-02 04:47:56]  status=None
[2026-02-02 04:47:56]  status_code=0
[2026-02-02 04:47:56]  storage_token=
[2026-02-02 04:47:56]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-6992352989/log.48310749._002963.job.log.tgz.1
[2026-02-02 04:47:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/b3/log.48310749._002963.job.log.tgz.1
[2026-02-02 04:47:56]  workdir=None
[2026-02-02 04:47:56] ]
[2026-02-02 04:47:56] 2026-02-02 03:25:30,316 | INFO     | transferring file log.48310749._002963.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-6992352989/log.48310749._002963.job.log.tgz.1 to /scratch/.boinc/slot
[2026-02-02 04:47:56] 2026-02-02 03:25:30,317 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-6992352989/log.48310749._002963.job.log.tgz.1 /scratch/.boinc/slots/2/log.48310749._002963.j
[2026-02-02 04:47:56] 2026-02-02 03:25:30,436 | INFO     | adding to output.list: log.48310749._002963.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/b3/log.48310749._002963.job.log.tg
[2026-02-02 04:47:56] 2026-02-02 03:25:30,437 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 04:47:56] 2026-02-02 03:25:30,437 | INFO     | summary of transferred files:
[2026-02-02 04:47:56] 2026-02-02 03:25:30,437 | INFO     |  -- lfn=log.48310749._002963.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 04:47:56] 2026-02-02 03:25:30,437 | INFO     | stage-out finished correctly
[2026-02-02 04:47:56] 2026-02-02 03:25:31,462 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 04:47:56] 2026-02-02 03:25:31,511 | INFO     | monitor loop #353: job 0:6992352989 is in state 'finished'
[2026-02-02 04:47:56] 2026-02-02 03:25:31,524 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 04:47:56] 2026-02-02 03:25:31,828 | INFO     | job 6992352989 has state=finished
[2026-02-02 04:47:56] 2026-02-02 03:25:31,829 | INFO     | preparing for final server update for job 6992352989 in state='finished'
[2026-02-02 04:47:56] 2026-02-02 03:25:31,829 | INFO     | reading metadata from: /scratch/.boinc/slots/2/PanDA_Pilot-6992352989/jobReport.json
[2026-02-02 04:47:56] 2026-02-02 03:25:31,831 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/2/workernode_map.json
[2026-02-02 04:47:56] 2026-02-02 03:25:31,832 | INFO     | this job has now completed (state=finished)
[2026-02-02 04:47:56] 2026-02-02 03:25:31,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 04:47:56] 2026-02-02 03:25:31,832 | INFO     | log transfer has been attempted: DONE
[2026-02-02 04:47:56] 2026-02-02 03:25:31,832 | INFO     | job 6992352989 has finished - writing final server update
[2026-02-02 04:47:56] 2026-02-02 03:25:31,832 | INFO     | total number of processed events: 400 (read)
[2026-02-02 04:47:56] 2026-02-02 03:25:31,862 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6992352989/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 04:47:56] 2026-02-02 03:25:31,863 | INFO     | extracted standard info from prmon json
[2026-02-02 04:47:56] 2026-02-02 03:25:31,863 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 04:47:56] 2026-02-02 03:25:31,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 04:47:56] 2026-02-02 03:25:31,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 04:47:56] 2026-02-02 03:25:31,864 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 04:47:56] 2026-02-02 03:25:31,866 | INFO     | fitting pss+swap vs Time
[2026-02-02 04:47:56] 2026-02-02 03:25:31,866 | INFO     | sum of square deviations: 130778884.66666651
[2026-02-02 04:47:56] 2026-02-02 03:25:31,866 | INFO     | sum of deviations: 12347549184.733335
[2026-02-02 04:47:56] 2026-02-02 03:25:31,866 | INFO     | mean x: 1770000323.1333334
[2026-02-02 04:47:56] 2026-02-02 03:25:31,866 | INFO     | mean y: 2600950.8266666667
[2026-02-02 04:47:56] 2026-02-02 03:25:31,866 | INFO     | intersect: -167112802293.26654
[2026-02-02 04:47:56] 2026-02-02 03:25:31,867 | INFO     | chi2: 0.7467959688997191
[2026-02-02 04:47:56] 2026-02-02 03:25:31,867 | INFO     | current memory leak: 94.42 B/s (using 75 data points, chi2=0.75)
[2026-02-02 04:47:56] 2026-02-02 03:25:31,867 | INFO     | could have reported an average CPU frequency of 2725 MHz (6 samples)
[2026-02-02 04:47:56] 2026-02-02 03:25:31,867 | INFO     | ..............................
[2026-02-02 04:47:56] 2026-02-02 03:25:31,867 | INFO     | . Timing measurements:
[2026-02-02 04:47:56] 2026-02-02 03:25:31,867 | INFO     | . get job = 0 s
[2026-02-02 04:47:56] 2026-02-02 03:25:31,867 | INFO     | . initial setup = 47 s
[2026-02-02 04:47:56] 2026-02-02 03:25:31,867 | INFO     | . payload setup = 64 s
[2026-02-02 04:47:56] 2026-02-02 03:25:31,868 | INFO     | . stage-in = 0 s
[2026-02-02 04:47:56] 2026-02-02 03:25:31,868 | INFO     | . payload execution = 5001 s
[2026-02-02 04:47:56] 2026-02-02 03:25:31,868 | INFO     | . stage-out = 1 s
[2026-02-02 04:47:56] 2026-02-02 03:25:31,868 | INFO     | . log creation = 0 s
[2026-02-02 04:47:56] 2026-02-02 03:25:31,868 | INFO     | ..............................
[2026-02-02 04:47:56] 2026-02-02 03:25:31,882 | INFO     | time since job start (5087s) is within the limit (349056.0s)
[2026-02-02 04:47:56] 2026-02-02 03:25:32,384 | INFO     | 
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | job summary report
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | --------------------------------------------------
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | PanDA job id: 6992352989
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | task id: 48310749
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | errors: (none)
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | pilot state: finished 
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | transexitcode: 0
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | exeerrorcode: 0
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | exeerrordiag: 
[2026-02-02 04:47:56] 2026-02-02 03:25:32,385 | INFO     | exitcode: 0
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | exitmsg: OK
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | cpuconsumptiontime: 36518 s
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | nevents: 400
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | neventsw: 0
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | pid: 1294876
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | pgrp: 1294876
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | corecount: 12
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | event service: False
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | sizes: {0: 2277733, 1: 2277817, 2: 2278278, 12: 2278278, 5071: 2304698, 5074: 2313822, 5075: 2314006, 5076: 2314200}
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | --------------------------------------------------
[2026-02-02 04:47:56] 2026-02-02 03:25:32,386 | INFO     | 
[2026-02-02 04:47:56] 2026-02-02 03:25:32,387 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2026-02-02 04:47:56] 2026-02-02 03:25:32,425 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,425 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,425 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,425 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 04:47:56] 2026-02-02 03:25:32,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,429 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 04:47:56] 2026-02-02 03:25:32,429 | INFO     | job 6992352989 has completed (purged errors)
[2026-02-02 04:47:56] 2026-02-02 03:25:32,429 | INFO     | overall cleanup function is called
[2026-02-02 04:47:56] 2026-02-02 03:25:33,445 | INFO     | --- collectZombieJob: --- 10, [1294876]
[2026-02-02 04:47:56] 2026-02-02 03:25:33,446 | INFO     | zombie collector waiting for pid 1294876
[2026-02-02 04:47:56] 2026-02-02 03:25:33,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 04:47:56] 2026-02-02 03:25:33,446 | INFO     | collected zombie processes
[2026-02-02 04:47:56] 2026-02-02 03:25:33,446 | INFO     | will attempt to kill all subprocesses of pid=1294876
[2026-02-02 04:47:56] 2026-02-02 03:25:34,569 | INFO     | PID=1281922 has CPU usage=19.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-02 04:47:56] 2026-02-02 03:25:34,570 | INFO     | .. there are 50 such processes running
[2026-02-02 04:47:56] 2026-02-02 03:25:34,945 | INFO     | process IDs to be killed: [1294876] (in reverse order)
[2026-02-02 04:47:56] 2026-02-02 03:25:35,205 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 04:47:56] 2026-02-02 03:25:35,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 04:47:56] 2026-02-02 03:25:35,253 | INFO     | did not find any defunct processes belonging to 1294876
[2026-02-02 04:47:56] 2026-02-02 03:25:35,301 | INFO     | did not find any defunct processes belonging to 1294876
[2026-02-02 04:47:56] 2026-02-02 03:25:35,302 | INFO     | ready for new job
[2026-02-02 04:47:56] 2026-02-02 03:25:35,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 04:47:56] 2026-02-02 03:25:35,308 | INFO     | **************************************
[2026-02-02 04:47:56] 2026-02-02 03:25:35,308 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 04:47:56] 2026-02-02 03:25:35,308 | INFO     | **************************************
[2026-02-02 04:47:56] 2026-02-02 03:25:35,308 | INFO     | 
[2026-02-02 04:47:56] 2026-02-02 03:25:35,319 | INFO     | architecture information:
[2026-02-02 04:47:56] 2026-02-02 03:25:35,322 | INFO     | executing command: cat /etc/os-release
[2026-02-02 04:47:56] 2026-02-02 03:25:35,385 | INFO     | cat /etc/os-release:
[2026-02-02 04:47:56] NAME="CentOS Linux"
[2026-02-02 04:47:56] VERSION="7 (Core)"
[2026-02-02 04:47:56] ID="centos"
[2026-02-02 04:47:56] ID_LIKE="rhel fedora"
[2026-02-02 04:47:56] VERSION_ID="7"
[2026-02-02 04:47:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 04:47:56] ANSI_COLOR="0;31"
[2026-02-02 04:47:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 04:47:56] HOME_URL="https://www.centos.org/"
[2026-02-02 04:47:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 04:47:56] 
[2026-02-02 04:47:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 04:47:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 04:47:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 04:47:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 04:47:56] 
[2026-02-02 04:47:56] 2026-02-02 03:25:35,386 | INFO     | **************************************
[2026-02-02 04:47:56] 2026-02-02 03:25:35,892 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2026-02-02 04:47:56] 2026-02-02 03:25:36,010 | INFO     | sufficient remaining disk space (1015677976576 B)
[2026-02-02 04:47:56] 2026-02-02 03:25:36,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 04:47:56] 2026-02-02 03:25:36,010 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 04:47:56] 2026-02-02 03:25:36,010 | INFO     | update_server=False
[2026-02-02 04:47:56] 2026-02-02 03:25:36,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 04:47:56] 2026-02-02 03:25:36,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 04:47:56] 2026-02-02 03:25:36,012 | INFO     | aborting loop
[2026-02-02 04:47:56] 2026-02-02 03:25:36,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 04:47:56] 2026-02-02 03:25:36,410 | INFO     | all data control threads have been joined
[2026-02-02 04:47:56] 2026-02-02 03:25:36,868 | INFO     | all job control threads have been joined
[2026-02-02 04:47:56] 2026-02-02 03:25:37,018 | INFO     | [job] job monitor thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:37,018 | INFO     | [job] retrieve thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:37,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 04:47:56] 2026-02-02 03:25:37,158 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:37,272 | INFO     | [payload] failed_post thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:37,286 | INFO     | all payload control threads have been joined
[2026-02-02 04:47:56] 2026-02-02 03:25:37,415 | INFO     | [data] control thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:37,442 | INFO     | [job] validate thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:37,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 04:47:56] 2026-02-02 03:25:37,720 | INFO     | [data] copytool_in thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:37,874 | INFO     | [job] control thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:37,939 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:38,034 | INFO     | [job] queue monitor thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:38,073 | INFO     | [payload] validate_post thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:38,153 | INFO     | [data] copytool_out thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:38,176 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:38,215 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:38,294 | INFO     | [payload] control thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:41,601 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 04:47:56] 2026-02-02 03:25:51,696 | INFO     | [monitor] cgroup control has ended
[2026-02-02 04:47:56] 2026-02-02 03:25:53,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340073097024)>', '<ExcThread(monitor, started 140339725723392)>']
[2026-02-02 04:47:56] 2026-02-02 03:25:58,387 | INFO     | all workflow threads have been joined
[2026-02-02 04:47:56] 2026-02-02 03:25:58,390 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 04:47:56] 2026-02-02 03:25:58,398 | INFO     | traces error code: 0
[2026-02-02 04:47:56] 2026-02-02 03:25:58,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 04:47:56] 2026-02-02 03:26:07,956 | INFO     | PID=1281922 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 04:47:56] 2026-02-02 03:26:07,959 | INFO     | .. there are 51 such processes running
[2026-02-02 04:47:56] 2026-02-02 03:26:07,959 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 04:47:56] 2026-02-02 03:26:07,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 04:47:56] 2026-02-02 03:26:07,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 04:47:56] 2026-02-02 03:26:07,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 04:47:56] 2026-02-02 03:26:07,960 | INFO     | [monitor] control thread has ended
[2026-02-02 04:47:56] 2026-02-02 03:26:08,213 [wrapper] ==== pilot stdout END ====
[2026-02-02 04:47:56] 2026-02-02 03:26:08,258 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 04:47:56] 2026-02-02 03:26:08,310 [wrapper] pilotpid: 1281922
[2026-02-02 04:47:56] 2026-02-02 03:26:08,342 [wrapper] Pilot exit status: 0
[2026-02-02 04:47:56] 2026-02-02 03:26:08,547 [wrapper] pandaids: 6992352989
[2026-02-02 04:47:56] 2026-02-02 03:26:08,993 [wrapper] cleanup supervisor_pilot 1366631 1281923
[2026-02-02 04:47:56] 2026-02-02 03:26:09,000 [wrapper] Test setup, not cleaning
[2026-02-02 04:47:56] 2026-02-02 03:26:09,006 [wrapper] apfmon messages muted
[2026-02-02 04:47:56] 2026-02-02 03:26:09,011 [wrapper] ==== wrapper stdout END ====
[2026-02-02 04:47:56] 2026-02-02 03:26:09,017 [wrapper] ==== wrapper stderr END ====
[2026-02-02 04:47:56]  *** Error codes and diagnostics ***
[2026-02-02 04:47:56]     "exeErrorCode": 0,
[2026-02-02 04:47:56]     "exeErrorDiag": "",
[2026-02-02 04:47:56]     "pilotErrorCode": 0,
[2026-02-02 04:47:56]     "pilotErrorDiag": "",
[2026-02-02 04:47:56]  *** Listing of results directory ***
[2026-02-02 04:47:56] total 666884
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc    584422 Feb  1 13:55 pilot3.tar.gz
[2026-02-02 04:47:56] -rwx------ 1 boinc boinc     36322 Feb  1 13:56 runpilot2-wrapper.sh
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc      5111 Feb  1 13:59 queuedata.json
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc       100 Feb  2 02:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 04:47:56] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 02:58 run_atlas
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc       105 Feb  2 02:58 job.xml
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc      6676 Feb  2 02:58 init_data.xml
[2026-02-02 04:47:56] -rw-r--r-- 2 boinc boinc 492035885 Feb  2 02:58 EVNT.48310747._000060.pool.root.1
[2026-02-02 04:47:56] -rw-r--r-- 2 boinc boinc     15845 Feb  2 02:58 start_atlas.sh
[2026-02-02 04:47:56] drwxrwx--x 2 boinc boinc      4096 Feb  2 02:58 shared
[2026-02-02 04:47:56] -rw-r--r-- 2 boinc boinc    597753 Feb  2 02:58 input.tar.gz
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc         0 Feb  2 02:58 boinc_lockfile
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc      2522 Feb  2 02:58 pandaJob.out
[2026-02-02 04:47:56] -rw------- 1 boinc boinc   1009765 Feb  2 02:59 agis_schedconf.cvmfs.json
[2026-02-02 04:47:56] -rw------- 1 boinc boinc   1511668 Feb  2 02:59 agis_ddmendpoints.agis.ALL.json
[2026-02-02 04:47:56] -rw------- 1 boinc boinc       436 Feb  2 03:00 workernode_map.json
[2026-02-02 04:47:56] drwx------ 5 boinc boinc      4096 Feb  2 03:00 pilot3
[2026-02-02 04:47:56] -rw------- 1 boinc boinc 184741234 Feb  2 04:24 HITS.48310749._002963.pool.root.1
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc       527 Feb  2 04:24 boinc_task_state.xml
[2026-02-02 04:47:56] -rw------- 1 boinc boinc      1018 Feb  2 04:25 memory_monitor_summary.json
[2026-02-02 04:47:56] -rw------- 1 boinc boinc    387787 Feb  2 04:25 log.48310749._002963.job.log.tgz.1
[2026-02-02 04:47:56] -rw------- 1 boinc boinc      6333 Feb  2 04:25 heartbeat.json
[2026-02-02 04:47:56] -rw------- 1 boinc boinc        95 Feb  2 04:25 pilot_heartbeat.json
[2026-02-02 04:47:56] -rw------- 1 boinc boinc       823 Feb  2 04:26 pilotlog.txt
[2026-02-02 04:47:56] -rw------- 1 boinc boinc    703869 Feb  2 04:26 log.48310749._002963.job.log.1
[2026-02-02 04:47:56] -rw------- 1 boinc boinc       357 Feb  2 04:26 output.list
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc       620 Feb  2 04:26 runtime_log
[2026-02-02 04:47:56] -rw------- 1 boinc boinc   1105920 Feb  2 04:26 result.tar.gz
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc      8879 Feb  2 04:26 runtime_log.err
[2026-02-02 04:47:56] -rw------- 1 boinc boinc       663 Feb  2 04:26 9O9KDmeBm68n9Rq4apOajLDm4fhM0noT9bVooX4SDmCwPKDmubeEbn.diag
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc        25 Feb  2 04:47 wrapper_checkpoint.txt
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc      8192 Feb  2 04:47 boinc_mmap_file
[2026-02-02 04:47:56] -rw-r--r-- 1 boinc boinc     21442 Feb  2 04:47 stderr.txt
[2026-02-02 04:47:56] HITS file was successfully produced:
[2026-02-02 04:47:56] -rw------- 1 boinc boinc 184741234 Feb  2 04:24 shared/HITS.pool.root.1
[2026-02-02 04:47:56]  *** Contents of shared directory: ***
[2026-02-02 04:47:56] total 662604
[2026-02-02 04:47:56] -rw-r--r-- 2 boinc boinc 492035885 Feb  2 02:58 ATLAS.root_0
[2026-02-02 04:47:56] -rw-r--r-- 2 boinc boinc     15845 Feb  2 02:58 start_atlas.sh
[2026-02-02 04:47:56] -rw-r--r-- 2 boinc boinc    597753 Feb  2 02:58 input.tar.gz
[2026-02-02 04:47:56] -rw------- 1 boinc boinc 184741234 Feb  2 04:24 HITS.pool.root.1
[2026-02-02 04:47:56] -rw------- 1 boinc boinc   1105920 Feb  2 04:26 result.tar.gz
04:47:57 (1275880): run_atlas exited; CPU time 36712.523525
04:47:57 (1275880): called boinc_finish(0)

</stderr_txt>
]]>

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