Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:50:21 (6026): wrapper (7.7.26015): starting
04:50:21 (6026): wrapper: running run_atlas (--nthreads 8)
[2026-02-02 04:50:21] Arguments: --nthreads 8
[2026-02-02 04:50:21] Threads: 8
[2026-02-02 04:50:21] Checking for CVMFS
[2026-02-02 04:50:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 04:50:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 04:50:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 04:50:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 04:50:22] 2.11.2.0 6904 69458 132636 155772 0 87 19364061 25165825 2095 130560 0 26147704 99.837 17152696 3074 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-02 04:50:22] CVMFS is ok
[2026-02-02 04:50:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 04:50:22] Checking for apptainer binary...
[2026-02-02 04:50:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 04:50:22] Running /usr/bin/apptainer --version
[2026-02-02 04:50:22] apptainer version 1.3.2-1.el7
[2026-02-02 04:50:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 04:50:23] cg-vwn474.simple-grid.lan
[2026-02-02 04:50:23] apptainer works
[2026-02-02 04:50:23] Set ATHENA_PROC_NUMBER=8
[2026-02-02 04:50:23] Set ATHENA_CORE_NUMBER=8
[2026-02-02 04:50:23] Starting ATLAS job with PandaID=6996177064
[2026-02-02 04:50:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 08:33:22]  *** The last 200 lines of the pilot log: ***
[2026-02-02 08:33:22] 2026-02-02 07:32:41,457 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-6996177064/jobReport.json
[2026-02-02 08:33:22] 2026-02-02 07:32:41,460 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-02-02 08:33:22] 2026-02-02 07:32:41,460 | INFO     | this job has now completed (state=finished)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,460 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,461 | INFO     | log transfer has been attempted: DONE
[2026-02-02 08:33:22] 2026-02-02 07:32:41,461 | INFO     | job 6996177064 has finished - writing final server update
[2026-02-02 08:33:22] 2026-02-02 07:32:41,461 | INFO     | total number of processed events: 400 (read)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,463 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6996177064/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,464 | INFO     | extracted standard info from prmon json
[2026-02-02 08:33:22] 2026-02-02 07:32:41,464 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 08:33:22] 2026-02-02 07:32:41,464 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 08:33:22] 2026-02-02 07:32:41,464 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 08:33:22] 2026-02-02 07:32:41,464 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 08:33:22] 2026-02-02 07:32:41,469 | INFO     | fitting pss+swap vs Time
[2026-02-02 08:33:22] 2026-02-02 07:32:41,469 | INFO     | sum of square deviations: 3213079672.518331
[2026-02-02 08:33:22] 2026-02-02 07:32:41,471 | INFO     | sum of deviations: 16517323915.674314
[2026-02-02 08:33:22] 2026-02-02 07:32:41,471 | INFO     | mean x: 1770010894.1972477
[2026-02-02 08:33:22] 2026-02-02 07:32:41,471 | INFO     | mean y: 2493497.123853211
[2026-02-02 08:33:22] 2026-02-02 07:32:41,471 | INFO     | intersect: -9096516254.730186
[2026-02-02 08:33:22] 2026-02-02 07:32:41,471 | INFO     | chi2: 1.5922808720525816
[2026-02-02 08:33:22] 2026-02-02 07:32:41,472 | INFO     | sum of square deviations: 2997046189.5492897
[2026-02-02 08:33:22] 2026-02-02 07:32:41,474 | INFO     | sum of deviations: 16001605312.056334
[2026-02-02 08:33:22] 2026-02-02 07:32:41,474 | INFO     | mean x: 1770010741.690141
[2026-02-02 08:33:22] 2026-02-02 07:32:41,474 | INFO     | mean y: 2493133.1220657276
[2026-02-02 08:33:22] 2026-02-02 07:32:41,474 | INFO     | intersect: -9447816103.148024
[2026-02-02 08:33:22] 2026-02-02 07:32:41,475 | INFO     | chi2: 1.5930632957186017
[2026-02-02 08:33:22] 2026-02-02 07:32:41,475 | INFO     | current chi2=1.5930632957186017 (change=-0.049138545827753094 %)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,475 | INFO     | right removable region: 212
[2026-02-02 08:33:22] 2026-02-02 07:32:41,475 | INFO     | sum of square deviations: 2997019957.5305266
[2026-02-02 08:33:22] 2026-02-02 07:32:41,477 | INFO     | sum of deviations: -16174687615.30518
[2026-02-02 08:33:22] 2026-02-02 07:32:41,477 | INFO     | mean x: 1770011046.713615
[2026-02-02 08:33:22] 2026-02-02 07:32:41,477 | INFO     | mean y: 2516321.863849765
[2026-02-02 08:33:22] 2026-02-02 07:32:41,477 | INFO     | intersect: 9555130639.394785
[2026-02-02 08:33:22] 2026-02-02 07:32:41,478 | INFO     | chi2: 0.12921987102943053
[2026-02-02 08:33:22] 2026-02-02 07:32:41,478 | INFO     | current chi2=0.12921987102943053 (change=91.88460570635031 %)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,478 | INFO     | sum of square deviations: 2790867404.9230742
[2026-02-02 08:33:22] 2026-02-02 07:32:41,480 | INFO     | sum of deviations: -15605368404.615393
[2026-02-02 08:33:22] 2026-02-02 07:32:41,480 | INFO     | mean x: 1770011199.2307692
[2026-02-02 08:33:22] 2026-02-02 07:32:41,481 | INFO     | mean y: 2515863.033653846
[2026-02-02 08:33:22] 2026-02-02 07:32:41,481 | INFO     | intersect: 9899681452.329212
[2026-02-02 08:33:22] 2026-02-02 07:32:41,481 | INFO     | chi2: 0.11503588105247192
[2026-02-02 08:33:22] 2026-02-02 07:32:41,481 | INFO     | current chi2=0.11503588105247192 (change=10.976632203671 %)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,481 | INFO     | left removable region: 20
[2026-02-02 08:33:22] 2026-02-02 07:32:41,482 | INFO     | sum of square deviations: 2195085278.9791756
[2026-02-02 08:33:22] 2026-02-02 07:32:41,483 | INFO     | sum of deviations: -1554436527.6979158
[2026-02-02 08:33:22] 2026-02-02 07:32:41,483 | INFO     | mean x: 1770011321.2604167
[2026-02-02 08:33:22] 2026-02-02 07:32:41,484 | INFO     | mean y: 2504399.9739583335
[2026-02-02 08:33:22] 2026-02-02 07:32:41,484 | INFO     | intersect: 1255927343.7447658
[2026-02-02 08:33:22] 2026-02-02 07:32:41,484 | INFO     | chi2: 0.04790968408137052
[2026-02-02 08:33:22] 2026-02-02 07:32:41,484 | INFO     | current memory leak: -0.71 B/s (using 192 data points, chi2=0.05)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,485 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,485 | INFO     | ..............................
[2026-02-02 08:33:22] 2026-02-02 07:32:41,485 | INFO     | . Timing measurements:
[2026-02-02 08:33:22] 2026-02-02 07:32:41,485 | INFO     | . get job = 0 s
[2026-02-02 08:33:22] 2026-02-02 07:32:41,485 | INFO     | . initial setup = 9 s
[2026-02-02 08:33:22] 2026-02-02 07:32:41,485 | INFO     | . payload setup = 11 s
[2026-02-02 08:33:22] 2026-02-02 07:32:41,485 | INFO     | . stage-in = 0 s
[2026-02-02 08:33:22] 2026-02-02 07:32:41,485 | INFO     | . payload execution = 13286 s
[2026-02-02 08:33:22] 2026-02-02 07:32:41,485 | INFO     | . stage-out = 1 s
[2026-02-02 08:33:22] 2026-02-02 07:32:41,486 | INFO     | . log creation = 0 s
[2026-02-02 08:33:22] 2026-02-02 07:32:41,486 | INFO     | ..............................
[2026-02-02 08:33:22] 2026-02-02 07:32:41,604 | INFO     | 
[2026-02-02 08:33:22] 2026-02-02 07:32:41,604 | INFO     | job summary report
[2026-02-02 08:33:22] 2026-02-02 07:32:41,604 | INFO     | --------------------------------------------------
[2026-02-02 08:33:22] 2026-02-02 07:32:41,604 | INFO     | PanDA job id: 6996177064
[2026-02-02 08:33:22] 2026-02-02 07:32:41,605 | INFO     | task id: 48317872
[2026-02-02 08:33:22] 2026-02-02 07:32:41,605 | INFO     | errors: (none)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,605 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 08:33:22] 2026-02-02 07:32:41,605 | INFO     | pilot state: finished 
[2026-02-02 08:33:22] 2026-02-02 07:32:41,605 | INFO     | transexitcode: 0
[2026-02-02 08:33:22] 2026-02-02 07:32:41,605 | INFO     | exeerrorcode: 0
[2026-02-02 08:33:22] 2026-02-02 07:32:41,605 | INFO     | exeerrordiag: 
[2026-02-02 08:33:22] 2026-02-02 07:32:41,605 | INFO     | exitcode: 0
[2026-02-02 08:33:22] 2026-02-02 07:32:41,605 | INFO     | exitmsg: OK
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | cpuconsumptiontime: 54984 s
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | nevents: 400
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | neventsw: 0
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | pid: 14548
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | pgrp: 14548
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | corecount: 8
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | event service: False
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | sizes: {0: 2277837, 1: 2278298, 13301: 2308368, 13303: 2317366, 13306: 2317422, 13307: 2317616}
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | --------------------------------------------------
[2026-02-02 08:33:22] 2026-02-02 07:32:41,606 | INFO     | 
[2026-02-02 08:33:22] 2026-02-02 07:32:41,607 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-02 08:33:22] 2026-02-02 07:32:41,640 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,640 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,640 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,642 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,643 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 08:33:22] 2026-02-02 07:32:41,643 | INFO     | job 6996177064 has completed (purged errors)
[2026-02-02 08:33:22] 2026-02-02 07:32:41,643 | INFO     | overall cleanup function is called
[2026-02-02 08:33:22] 2026-02-02 07:32:42,652 | INFO     | --- collectZombieJob: --- 10, [14548]
[2026-02-02 08:33:22] 2026-02-02 07:32:42,653 | INFO     | zombie collector waiting for pid 14548
[2026-02-02 08:33:22] 2026-02-02 07:32:42,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 08:33:22] 2026-02-02 07:32:42,653 | INFO     | collected zombie processes
[2026-02-02 08:33:22] 2026-02-02 07:32:42,653 | INFO     | will attempt to kill all subprocesses of pid=14548
[2026-02-02 08:33:22] 2026-02-02 07:32:42,754 | INFO     | process IDs to be killed: [14548] (in reverse order)
[2026-02-02 08:33:22] 2026-02-02 07:32:42,861 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 08:33:22] 2026-02-02 07:32:42,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 08:33:22] 2026-02-02 07:32:42,864 | INFO     | did not find any defunct processes belonging to 14548
[2026-02-02 08:33:22] 2026-02-02 07:32:42,866 | INFO     | did not find any defunct processes belonging to 14548
[2026-02-02 08:33:22] 2026-02-02 07:32:42,867 | INFO     | ready for new job
[2026-02-02 08:33:22] 2026-02-02 07:32:42,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 08:33:22] 2026-02-02 07:32:42,869 | INFO     | **************************************
[2026-02-02 08:33:22] 2026-02-02 07:32:42,869 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 08:33:22] 2026-02-02 07:32:42,869 | INFO     | **************************************
[2026-02-02 08:33:22] 2026-02-02 07:32:42,869 | INFO     | 
[2026-02-02 08:33:22] 2026-02-02 07:32:42,870 | INFO     | pilot is running in a VM
[2026-02-02 08:33:22] 2026-02-02 07:32:42,870 | INFO     | architecture information:
[2026-02-02 08:33:22] 2026-02-02 07:32:42,870 | INFO     | executing command: cat /etc/os-release
[2026-02-02 08:33:22] 2026-02-02 07:32:42,893 | INFO     | cat /etc/os-release:
[2026-02-02 08:33:22] NAME="CentOS Linux"
[2026-02-02 08:33:22] VERSION="7 (Core)"
[2026-02-02 08:33:22] ID="centos"
[2026-02-02 08:33:22] ID_LIKE="rhel fedora"
[2026-02-02 08:33:22] VERSION_ID="7"
[2026-02-02 08:33:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 08:33:22] ANSI_COLOR="0;31"
[2026-02-02 08:33:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 08:33:22] HOME_URL="https://www.centos.org/"
[2026-02-02 08:33:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 08:33:22] 
[2026-02-02 08:33:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 08:33:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 08:33:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 08:33:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 08:33:22] 
[2026-02-02 08:33:22] 2026-02-02 07:32:42,894 | INFO     | **************************************
[2026-02-02 08:33:22] 2026-02-02 07:32:43,396 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-02 08:33:22] 2026-02-02 07:32:43,438 | INFO     | sufficient remaining disk space (496120102912 B)
[2026-02-02 08:33:22] 2026-02-02 07:32:43,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 08:33:22] 2026-02-02 07:32:43,439 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 08:33:22] 2026-02-02 07:32:43,439 | INFO     | update_server=False
[2026-02-02 08:33:22] 2026-02-02 07:32:43,439 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 08:33:22] 2026-02-02 07:32:43,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 08:33:22] 2026-02-02 07:32:43,597 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 08:33:22] 2026-02-02 07:32:43,597 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 08:33:22] 2026-02-02 07:32:43,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 08:33:22] 2026-02-02 07:32:43,598 | INFO     | will abort loop
[2026-02-02 08:33:22] 2026-02-02 07:32:43,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 08:33:22] 2026-02-02 07:32:43,650 | INFO     | all payload control threads have been joined
[2026-02-02 08:33:22] 2026-02-02 07:32:43,912 | INFO     | all data control threads have been joined
[2026-02-02 08:33:22] 2026-02-02 07:32:44,130 | INFO     | all job control threads have been joined
[2026-02-02 08:33:22] 2026-02-02 07:32:44,444 | INFO     | [job] retrieve thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:44,445 | INFO     | [job] queue monitor thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:44,538 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:44,598 | INFO     | [job] job monitor thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:44,655 | INFO     | [payload] control thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:44,772 | INFO     | [payload] failed_post thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:44,918 | INFO     | [data] control thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:45,131 | INFO     | [job] control thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:45,154 | INFO     | [payload] validate_post thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:45,623 | INFO     | [data] copytool_out thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:45,680 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:45,688 | INFO     | [data] copytool_in thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:45,742 | INFO     | [job] validate thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:45,742 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:46,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 08:33:22] 2026-02-02 07:32:50,631 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:32:54,207 | INFO     | job.realtimelogging is not enabled
[2026-02-02 08:33:22] 2026-02-02 07:32:55,209 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 08:33:22] 2026-02-02 07:33:13,387 | INFO     | PID=10090 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-02 08:33:22] 2026-02-02 07:33:13,387 | INFO     | .. there are 6 such processes running
[2026-02-02 08:33:22] 2026-02-02 07:33:13,388 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 08:33:22] 2026-02-02 07:33:13,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 08:33:22] 2026-02-02 07:33:13,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 08:33:22] 2026-02-02 07:33:16,141 | INFO     | [monitor] cgroup control has ended
[2026-02-02 08:33:22] 2026-02-02 07:33:17,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407821162304)>', '<ExcThread(monitor, started 140407086237440)>']
[2026-02-02 08:33:22] 2026-02-02 07:33:17,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 08:33:22] 2026-02-02 07:33:17,408 | INFO     | [monitor] control thread has ended
[2026-02-02 08:33:22] 2026-02-02 07:33:22,040 | INFO     | all workflow threads have been joined
[2026-02-02 08:33:22] 2026-02-02 07:33:22,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 08:33:22] 2026-02-02 07:33:22,041 | INFO     | traces error code: 0
[2026-02-02 08:33:22] 2026-02-02 07:33:22,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 08:33:22] 2026-02-02 07:33:22,255 [wrapper] ==== pilot stdout END ====
[2026-02-02 08:33:22] 2026-02-02 07:33:22,261 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 08:33:22] 2026-02-02 07:33:22,279 [wrapper] pilotpid: 10090
[2026-02-02 08:33:22] 2026-02-02 07:33:22,285 [wrapper] Pilot exit status: 0
[2026-02-02 08:33:22] 2026-02-02 07:33:22,323 [wrapper] pandaids: 6996177064
[2026-02-02 08:33:22] 2026-02-02 07:33:22,369 [wrapper] cleanup supervisor_pilot 26218 10091
[2026-02-02 08:33:22] 2026-02-02 07:33:22,389 [wrapper] Test setup, not cleaning
[2026-02-02 08:33:22] 2026-02-02 07:33:22,393 [wrapper] apfmon messages muted
[2026-02-02 08:33:22] 2026-02-02 07:33:22,400 [wrapper] ==== wrapper stdout END ====
[2026-02-02 08:33:22] 2026-02-02 07:33:22,403 [wrapper] ==== wrapper stderr END ====
[2026-02-02 08:33:22]  *** Error codes and diagnostics ***
[2026-02-02 08:33:22]     "exeErrorCode": 0,
[2026-02-02 08:33:22]     "exeErrorDiag": "",
[2026-02-02 08:33:22]     "pilotErrorCode": 0,
[2026-02-02 08:33:22]     "pilotErrorDiag": "",
[2026-02-02 08:33:22]  *** Listing of results directory ***
[2026-02-02 08:33:22] total 669068
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc    584422 Feb  1 18:33 pilot3.tar.gz
[2026-02-02 08:33:22] -rwx------. 1 boinc boinc     36322 Feb  1 18:37 runpilot2-wrapper.sh
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc      5111 Feb  1 18:40 queuedata.json
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc       100 Feb  2 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 08:33:22] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 04:50 run_atlas
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc       105 Feb  2 04:50 job.xml
[2026-02-02 08:33:22] -rw-r--r--. 2 boinc boinc 494773748 Feb  2 04:50 EVNT.48317869._000320.pool.root.1
[2026-02-02 08:33:22] -rw-r--r--. 2 boinc boinc     15845 Feb  2 04:50 start_atlas.sh
[2026-02-02 08:33:22] drwxrwx--x. 2 boinc boinc        68 Feb  2 04:50 shared
[2026-02-02 08:33:22] -rw-r--r--. 2 boinc boinc    597761 Feb  2 04:50 input.tar.gz
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc      6392 Feb  2 04:50 init_data.xml
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc         0 Feb  2 04:50 boinc_lockfile
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc      2519 Feb  2 04:50 pandaJob.out
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc   1009823 Feb  2 04:50 agis_schedconf.cvmfs.json
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc       415 Feb  2 04:50 workernode_map.json
[2026-02-02 08:33:22] drwx------. 5 boinc boinc      4096 Feb  2 04:50 pilot3
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc 181791467 Feb  2 08:31 HITS.48317872._017483.pool.root.1
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc       531 Feb  2 08:32 boinc_task_state.xml
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc        95 Feb  2 08:32 pilot_heartbeat.json
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc      1011 Feb  2 08:32 memory_monitor_summary.json
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc   1511668 Feb  2 08:32 agis_ddmendpoints.agis.ALL.json
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc    454295 Feb  2 08:32 log.48317872._017483.job.log.tgz.1
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc      6308 Feb  2 08:32 heartbeat.json
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc        28 Feb  2 08:32 wrapper_checkpoint.txt
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc      8192 Feb  2 08:32 boinc_mmap_file
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc      5138 Feb  2 08:33 pilotlog.txt
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc   1865166 Feb  2 08:33 log.48317872._017483.job.log.1
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc       357 Feb  2 08:33 output.list
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc       620 Feb  2 08:33 runtime_log
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc   2334720 Feb  2 08:33 result.tar.gz
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc      8816 Feb  2 08:33 runtime_log.err
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc       654 Feb  2 08:33 DhBMDmqYq68n9Rq4apOajLDm4fhM0noT9bVooX4SDmcRQKDmM929Yn.diag
[2026-02-02 08:33:22] -rw-r--r--. 1 boinc boinc     20941 Feb  2 08:33 stderr.txt
[2026-02-02 08:33:22] HITS file was successfully produced:
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc 181791467 Feb  2 08:31 shared/HITS.pool.root.1
[2026-02-02 08:33:22]  *** Contents of shared directory: ***
[2026-02-02 08:33:22] total 663592
[2026-02-02 08:33:22] -rw-r--r--. 2 boinc boinc 494773748 Feb  2 04:50 ATLAS.root_0
[2026-02-02 08:33:22] -rw-r--r--. 2 boinc boinc     15845 Feb  2 04:50 start_atlas.sh
[2026-02-02 08:33:22] -rw-r--r--. 2 boinc boinc    597761 Feb  2 04:50 input.tar.gz
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc 181791467 Feb  2 08:31 HITS.pool.root.1
[2026-02-02 08:33:22] -rw-------. 1 boinc boinc   2334720 Feb  2 08:33 result.tar.gz
08:33:23 (6026): run_atlas exited; CPU time 55144.712576
08:33:23 (6026): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN