Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:54:15 (565864): wrapper (7.7.26015): starting
02:54:15 (565864): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 02:54:15] Arguments: --nthreads 4
[2026-02-02 02:54:15] Threads: 4
[2026-02-02 02:54:15] Checking for CVMFS
[2026-02-02 02:54:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 02:54:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 02:54:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 02:54:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 02:54:16] 2.9.2.0 110105 2499 87904 155769 2 50 23881063 36864001 0 130560 0 1269976 99.988 89799 17349 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 02:54:16] CVMFS is ok
[2026-02-02 02:54:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 02:54:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 02:54:16] Further information can be found at the LHC@home message board.
[2026-02-02 02:54:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 02:54:16] Checking for apptainer binary...
[2026-02-02 02:54:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 02:54:16] Running /usr/bin/apptainer --version
[2026-02-02 02:54:16] apptainer version 1.4.1-1.1
[2026-02-02 02:54:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 02:54:16] atlasA215b
[2026-02-02 02:54:16] apptainer works
[2026-02-02 02:54:16] Set ATHENA_PROC_NUMBER=4
[2026-02-02 02:54:16] Set ATHENA_CORE_NUMBER=4
[2026-02-02 02:54:16] Starting ATLAS job with PandaID=6991818630
[2026-02-02 02:54:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 04:06:40]  *** The last 200 lines of the pilot log: ***
[2026-02-02 04:06:40]  guid=38f6fdce-dfea-4d1e-b026-e6178f4a241c
[2026-02-02 04:06:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 04:06:40]  is_altstaged=None
[2026-02-02 04:06:40]  is_tar=False
[2026-02-02 04:06:40]  lfn=log.48318010._007732.job.log.tgz.1
[2026-02-02 04:06:40]  mtime=0
[2026-02-02 04:06:40]  protocol_id=None
[2026-02-02 04:06:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 04:06:40]  replicas=None
[2026-02-02 04:06:40]  scope=mc23_13p6TeV
[2026-02-02 04:06:40]  status=None
[2026-02-02 04:06:40]  status_code=0
[2026-02-02 04:06:40]  storage_token=
[2026-02-02 04:06:40]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6991818630/log.48318010._007732.job.log.tgz.1
[2026-02-02 04:06:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/64/log.48318010._007732.job.log.tgz.1
[2026-02-02 04:06:40]  workdir=None
[2026-02-02 04:06:40] ]
[2026-02-02 04:06:40] 2026-02-02 03:05:58,124 | INFO     | transferring file log.48318010._007732.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6991818630/log.48318010._007732.job.log.tgz.1 to /local/data/boinc/
[2026-02-02 04:06:40] 2026-02-02 03:05:58,125 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6991818630/log.48318010._007732.job.log.tgz.1 /local/data/boinc/slots/0/log.48318010._0077
[2026-02-02 04:06:40] 2026-02-02 03:05:58,143 | INFO     | adding to output.list: log.48318010._007732.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/64/log.48318010._007732.job.log.tg
[2026-02-02 04:06:40] 2026-02-02 03:05:58,143 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 04:06:40] 2026-02-02 03:05:58,143 | INFO     | summary of transferred files:
[2026-02-02 04:06:40] 2026-02-02 03:05:58,143 | INFO     |  -- lfn=log.48318010._007732.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 04:06:40] 2026-02-02 03:05:58,143 | INFO     | stage-out finished correctly
[2026-02-02 04:06:40] 2026-02-02 03:05:58,335 | INFO     | monitor loop #331: job 0:6991818630 is in state 'finished'
[2026-02-02 04:06:40] 2026-02-02 03:05:58,336 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 04:06:40] 2026-02-02 03:05:58,408 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 04:06:40] 2026-02-02 03:05:58,445 | INFO     | job 6991818630 has state=finished
[2026-02-02 04:06:40] 2026-02-02 03:05:58,445 | INFO     | preparing for final server update for job 6991818630 in state='finished'
[2026-02-02 04:06:40] 2026-02-02 03:05:58,573 | INFO     | time since job start (4289s) is within the limit (349056.0s)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,037 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,037 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6991818630/jobReport.json
[2026-02-02 04:06:40] 2026-02-02 03:05:59,039 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-02 04:06:40] 2026-02-02 03:05:59,039 | INFO     | this job has now completed (state=finished)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,039 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,039 | INFO     | log transfer has been attempted: DONE
[2026-02-02 04:06:40] 2026-02-02 03:05:59,039 | INFO     | job 6991818630 has finished - writing final server update
[2026-02-02 04:06:40] 2026-02-02 03:05:59,039 | INFO     | total number of processed events: 400 (read)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,041 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6991818630/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,041 | INFO     | extracted standard info from prmon json
[2026-02-02 04:06:40] 2026-02-02 03:05:59,041 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 04:06:40] 2026-02-02 03:05:59,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 04:06:40] 2026-02-02 03:05:59,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 04:06:40] 2026-02-02 03:05:59,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | fitting pss+swap vs Time
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | sum of square deviations: 77515872.0
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | sum of deviations: -6574181365.0
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | mean x: 1769999484.0
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | mean y: 2478127.3492063493
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | intersect: 150117510359.35992
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | chi2: 0.09820805127724828
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | current memory leak: -84.81 B/s (using 63 data points, chi2=0.10)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | could have reported an average CPU frequency of 3576 MHz (6 samples)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | ..............................
[2026-02-02 04:06:40] 2026-02-02 03:05:59,042 | INFO     | . Timing measurements:
[2026-02-02 04:06:40] 2026-02-02 03:05:59,043 | INFO     | . get job = 0 s
[2026-02-02 04:06:40] 2026-02-02 03:05:59,043 | INFO     | . initial setup = 4 s
[2026-02-02 04:06:40] 2026-02-02 03:05:59,043 | INFO     | . payload setup = 4 s
[2026-02-02 04:06:40] 2026-02-02 03:05:59,043 | INFO     | . stage-in = 0 s
[2026-02-02 04:06:40] 2026-02-02 03:05:59,043 | INFO     | . payload execution = 4269 s
[2026-02-02 04:06:40] 2026-02-02 03:05:59,043 | INFO     | . stage-out = 0 s
[2026-02-02 04:06:40] 2026-02-02 03:05:59,043 | INFO     | . log creation = 0 s
[2026-02-02 04:06:40] 2026-02-02 03:05:59,043 | INFO     | ..............................
[2026-02-02 04:06:40] 2026-02-02 03:05:59,078 | INFO     | 
[2026-02-02 04:06:40] 2026-02-02 03:05:59,078 | INFO     | job summary report
[2026-02-02 04:06:40] 2026-02-02 03:05:59,078 | INFO     | --------------------------------------------------
[2026-02-02 04:06:40] 2026-02-02 03:05:59,078 | INFO     | PanDA job id: 6991818630
[2026-02-02 04:06:40] 2026-02-02 03:05:59,078 | INFO     | task id: 48318010
[2026-02-02 04:06:40] 2026-02-02 03:05:59,078 | INFO     | errors: (none)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,078 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 04:06:40] 2026-02-02 03:05:59,078 | INFO     | pilot state: finished 
[2026-02-02 04:06:40] 2026-02-02 03:05:59,078 | INFO     | transexitcode: 0
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | exeerrorcode: 0
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | exeerrordiag: 
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | exitcode: 0
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | exitmsg: OK
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | cpuconsumptiontime: 16104 s
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | nevents: 400
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | neventsw: 0
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | pid: 574511
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | pgrp: 574511
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | corecount: 4
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | event service: False
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | sizes: {0: 2278223, 11: 2278223, 4277: 2304404, 4278: 2313602}
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | --------------------------------------------------
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | 
[2026-02-02 04:06:40] 2026-02-02 03:05:59,079 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,097 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 04:06:40] 2026-02-02 03:05:59,098 | INFO     | job 6991818630 has completed (purged errors)
[2026-02-02 04:06:40] 2026-02-02 03:05:59,098 | INFO     | overall cleanup function is called
[2026-02-02 04:06:40] 2026-02-02 03:06:00,104 | INFO     | --- collectZombieJob: --- 10, [574511]
[2026-02-02 04:06:40] 2026-02-02 03:06:00,105 | INFO     | zombie collector waiting for pid 574511
[2026-02-02 04:06:40] 2026-02-02 03:06:00,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 04:06:40] 2026-02-02 03:06:00,105 | INFO     | collected zombie processes
[2026-02-02 04:06:40] 2026-02-02 03:06:00,105 | INFO     | will attempt to kill all subprocesses of pid=574511
[2026-02-02 04:06:40] 2026-02-02 03:06:00,154 | INFO     | process IDs to be killed: [574511] (in reverse order)
[2026-02-02 04:06:40] 2026-02-02 03:06:00,189 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 04:06:40] 2026-02-02 03:06:00,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 04:06:40] 2026-02-02 03:06:00,192 | INFO     | did not find any defunct processes belonging to 574511
[2026-02-02 04:06:40] 2026-02-02 03:06:00,193 | INFO     | did not find any defunct processes belonging to 574511
[2026-02-02 04:06:40] 2026-02-02 03:06:00,193 | INFO     | ready for new job
[2026-02-02 04:06:40] 2026-02-02 03:06:00,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 04:06:40] 2026-02-02 03:06:00,194 | INFO     | **************************************
[2026-02-02 04:06:40] 2026-02-02 03:06:00,194 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 04:06:40] 2026-02-02 03:06:00,194 | INFO     | **************************************
[2026-02-02 04:06:40] 2026-02-02 03:06:00,194 | INFO     | 
[2026-02-02 04:06:40] 2026-02-02 03:06:00,195 | INFO     | architecture information:
[2026-02-02 04:06:40] 2026-02-02 03:06:00,195 | INFO     | executing command: cat /etc/os-release
[2026-02-02 04:06:40] 2026-02-02 03:06:00,209 | INFO     | cat /etc/os-release:
[2026-02-02 04:06:40] NAME="CentOS Linux"
[2026-02-02 04:06:40] VERSION="7 (Core)"
[2026-02-02 04:06:40] ID="centos"
[2026-02-02 04:06:40] ID_LIKE="rhel fedora"
[2026-02-02 04:06:40] VERSION_ID="7"
[2026-02-02 04:06:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 04:06:40] ANSI_COLOR="0;31"
[2026-02-02 04:06:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 04:06:40] HOME_URL="https://www.centos.org/"
[2026-02-02 04:06:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 04:06:40] 
[2026-02-02 04:06:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 04:06:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 04:06:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 04:06:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 04:06:40] 
[2026-02-02 04:06:40] 2026-02-02 03:06:00,209 | INFO     | **************************************
[2026-02-02 04:06:40] 2026-02-02 03:06:00,712 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-02 04:06:40] 2026-02-02 03:06:00,730 | INFO     | sufficient remaining disk space (333660028928 B)
[2026-02-02 04:06:40] 2026-02-02 03:06:00,730 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 04:06:40] 2026-02-02 03:06:00,730 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 04:06:40] 2026-02-02 03:06:00,731 | INFO     | update_server=False
[2026-02-02 04:06:40] 2026-02-02 03:06:00,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 04:06:40] 2026-02-02 03:06:00,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 04:06:40] 2026-02-02 03:06:00,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 04:06:40] 2026-02-02 03:06:00,840 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 04:06:40] 2026-02-02 03:06:00,840 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 04:06:40] 2026-02-02 03:06:00,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 04:06:40] 2026-02-02 03:06:00,840 | INFO     | will abort loop
[2026-02-02 04:06:40] 2026-02-02 03:06:00,919 | INFO     | all data control threads have been joined
[2026-02-02 04:06:40] 2026-02-02 03:06:01,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 04:06:40] 2026-02-02 03:06:01,516 | INFO     | all job control threads have been joined
[2026-02-02 04:06:40] 2026-02-02 03:06:01,736 | INFO     | [job] retrieve thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:01,737 | INFO     | [job] queue monitor thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:01,783 | INFO     | all payload control threads have been joined
[2026-02-02 04:06:40] 2026-02-02 03:06:01,846 | INFO     | [job] job monitor thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:01,879 | INFO     | [payload] failed_post thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:01,925 | INFO     | [data] control thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:02,281 | INFO     | [job] validate thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:02,414 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:02,457 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:02,522 | INFO     | [job] control thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:02,660 | INFO     | [data] copytool_in thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:02,789 | INFO     | [payload] control thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:02,865 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:03,190 | INFO     | [data] copytool_out thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:03,205 | INFO     | [payload] validate_post thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:04,738 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:11,364 | INFO     | job.realtimelogging is not enabled
[2026-02-02 04:06:40] 2026-02-02 03:06:12,369 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 04:06:40] 2026-02-02 03:06:31,713 | INFO     | PID=569994 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 04:06:40] 2026-02-02 03:06:31,713 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 04:06:40] 2026-02-02 03:06:31,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 04:06:40] 2026-02-02 03:06:31,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 04:06:40] 2026-02-02 03:06:33,979 | INFO     | [monitor] cgroup control has ended
[2026-02-02 04:06:40] 2026-02-02 03:06:34,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652758705984)>', '<ExcThread(monitor, started 140651446396672)>']
[2026-02-02 04:06:40] 2026-02-02 03:06:35,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 04:06:40] 2026-02-02 03:06:35,735 | INFO     | [monitor] control thread has ended
[2026-02-02 04:06:40] 2026-02-02 03:06:39,853 | INFO     | all workflow threads have been joined
[2026-02-02 04:06:40] 2026-02-02 03:06:39,853 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 04:06:40] 2026-02-02 03:06:39,853 | INFO     | traces error code: 0
[2026-02-02 04:06:40] 2026-02-02 03:06:39,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 04:06:40] 2026-02-02 03:06:39,935 [wrapper] ==== pilot stdout END ====
[2026-02-02 04:06:40] 2026-02-02 03:06:39,939 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 04:06:40] 2026-02-02 03:06:39,943 [wrapper] pilotpid: 569994
[2026-02-02 04:06:40] 2026-02-02 03:06:39,947 [wrapper] Pilot exit status: 0
[2026-02-02 04:06:40] 2026-02-02 03:06:39,959 [wrapper] pandaids: 6991818630
[2026-02-02 04:06:40] 2026-02-02 03:06:39,984 [wrapper] cleanup supervisor_pilot  579636 569995
[2026-02-02 04:06:40] 2026-02-02 03:06:39,988 [wrapper] Test setup, not cleaning
[2026-02-02 04:06:40] 2026-02-02 03:06:39,992 [wrapper] apfmon messages muted
[2026-02-02 04:06:40] 2026-02-02 03:06:39,995 [wrapper] ==== wrapper stdout END ====
[2026-02-02 04:06:40] 2026-02-02 03:06:40,000 [wrapper] ==== wrapper stderr END ====
[2026-02-02 04:06:40]  *** Error codes and diagnostics ***
[2026-02-02 04:06:40]     "exeErrorCode": 0,
[2026-02-02 04:06:40]     "exeErrorDiag": "",
[2026-02-02 04:06:40]     "pilotErrorCode": 0,
[2026-02-02 04:06:40]     "pilotErrorDiag": "",
[2026-02-02 04:06:40]  *** Listing of results directory ***
[2026-02-02 04:06:40] total 673732
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc    584422 Feb  1 13:55 pilot3.tar.gz
[2026-02-02 04:06:40] -rwx------ 1 boinc boinc     36322 Feb  1 13:57 runpilot2-wrapper.sh
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc      5111 Feb  1 13:59 queuedata.json
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc       100 Feb  2 02:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 04:06:40] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 02:54 run_atlas
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc       105 Feb  2 02:54 job.xml
[2026-02-02 04:06:40] -rw-r--r-- 2 boinc boinc 502187651 Feb  2 02:54 EVNT.48318008._000020.pool.root.1
[2026-02-02 04:06:40] drwxrwx--x 2 boinc boinc      4096 Feb  2 02:54 shared
[2026-02-02 04:06:40] -rw-r--r-- 2 boinc boinc    597768 Feb  2 02:54 input.tar.gz
[2026-02-02 04:06:40] -rw-r--r-- 2 boinc boinc     15845 Feb  2 02:54 start_atlas.sh
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc         0 Feb  2 02:54 boinc_setup_complete
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc      6372 Feb  2 02:54 init_data.xml
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc         0 Feb  2 02:54 boinc_lockfile
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc      2523 Feb  2 02:54 pandaJob.out
[2026-02-02 04:06:40] -rw------- 1 boinc boinc   1009765 Feb  2 02:54 agis_schedconf.cvmfs.json
[2026-02-02 04:06:40] -rw------- 1 boinc boinc   1511668 Feb  2 02:54 agis_ddmendpoints.agis.ALL.json
[2026-02-02 04:06:40] -rw------- 1 boinc boinc       431 Feb  2 02:54 workernode_map.json
[2026-02-02 04:06:40] drwx------ 5 boinc boinc      4096 Feb  2 02:54 pilot3
[2026-02-02 04:06:40] -rw------- 1 boinc boinc 181944041 Feb  2 04:05 HITS.48318010._007732.pool.root.1
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc       530 Feb  2 04:05 boinc_task_state.xml
[2026-02-02 04:06:40] -rw------- 1 boinc boinc        95 Feb  2 04:05 pilot_heartbeat.json
[2026-02-02 04:06:40] -rw------- 1 boinc boinc      1020 Feb  2 04:05 memory_monitor_summary.json
[2026-02-02 04:06:40] -rw------- 1 boinc boinc    280719 Feb  2 04:05 log.48318010._007732.job.log.tgz.1
[2026-02-02 04:06:40] -rw------- 1 boinc boinc      6322 Feb  2 04:05 heartbeat.json
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc      8192 Feb  2 04:06 boinc_mmap_file
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc        27 Feb  2 04:06 wrapper_checkpoint.txt
[2026-02-02 04:06:40] -rw------- 1 boinc boinc      5005 Feb  2 04:06 pilotlog.txt
[2026-02-02 04:06:40] -rw------- 1 boinc boinc    634590 Feb  2 04:06 log.48318010._007732.job.log.1
[2026-02-02 04:06:40] -rw------- 1 boinc boinc       357 Feb  2 04:06 output.list
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc       620 Feb  2 04:06 runtime_log
[2026-02-02 04:06:40] -rw------- 1 boinc boinc    931840 Feb  2 04:06 result.tar.gz
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc      8916 Feb  2 04:06 runtime_log.err
[2026-02-02 04:06:40] -rw------- 1 boinc boinc       661 Feb  2 04:06 jZbMDmqBm68n9Rq4apOajLDm4fhM0noT9bVooX4SDm9xPKDmA1TWWn.diag
[2026-02-02 04:06:40] -rw-r--r-- 1 boinc boinc     21314 Feb  2 04:06 stderr.txt
[2026-02-02 04:06:40] HITS file was successfully produced:
[2026-02-02 04:06:40] -rw------- 1 boinc boinc 181944041 Feb  2 04:05 shared/HITS.pool.root.1
[2026-02-02 04:06:40]  *** Contents of shared directory: ***
[2026-02-02 04:06:40] total 669620
[2026-02-02 04:06:40] -rw-r--r-- 2 boinc boinc 502187651 Feb  2 02:54 ATLAS.root_0
[2026-02-02 04:06:40] -rw-r--r-- 2 boinc boinc    597768 Feb  2 02:54 input.tar.gz
[2026-02-02 04:06:40] -rw-r--r-- 2 boinc boinc     15845 Feb  2 02:54 start_atlas.sh
[2026-02-02 04:06:40] -rw------- 1 boinc boinc 181944041 Feb  2 04:05 HITS.pool.root.1
[2026-02-02 04:06:40] -rw------- 1 boinc boinc    931840 Feb  2 04:06 result.tar.gz
04:06:41 (565864): run_atlas exited; CPU time 16128.947420
04:06:41 (565864): called boinc_finish(0)

</stderr_txt>
]]>

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