Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:32:04 (13048): wrapper (7.7.26015): starting
12:32:04 (13048): wrapper: running run_atlas (--nthreads 8)
[2026-02-01 12:32:04] Arguments: --nthreads 8
[2026-02-01 12:32:04] Threads: 8
[2026-02-01 12:32:04] Checking for CVMFS
[2026-02-01 12:32:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 12:32:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 12:32:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 12:32:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 12:32:05] 2.11.2.0 14221 214451 157428 155758 3 52 14603435 18432000 1833 130560 0 144260369 99.981 8035045 29633 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-01 12:32:05] CVMFS is ok
[2026-02-01 12:32:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 12:32:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 12:32:05] Further information can be found at the LHC@home message board.
[2026-02-01 12:32:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 12:32:05] Checking for apptainer binary...
[2026-02-01 12:32:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 12:32:05] Running /usr/bin/apptainer --version
[2026-02-01 12:32:05] apptainer version 1.3.2-1.el7
[2026-02-01 12:32:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 12:32:05] c-206-9.aglt2.org
[2026-02-01 12:32:05] apptainer works
[2026-02-01 12:32:05] Set ATHENA_PROC_NUMBER=8
[2026-02-01 12:32:05] Set ATHENA_CORE_NUMBER=8
[2026-02-01 12:32:05] Starting ATLAS job with PandaID=6982692265
[2026-02-01 12:32:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 15:16:42]  *** The last 200 lines of the pilot log: ***
[2026-02-01 15:16:42] 2026-02-01 20:16:03,995 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 15:16:42] 2026-02-01 20:16:04,145 | INFO     | job 6982692265 has state=finished
[2026-02-01 15:16:42] 2026-02-01 20:16:04,155 | INFO     | preparing for final server update for job 6982692265 in state='finished'
[2026-02-01 15:16:42] 2026-02-01 20:16:04,155 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-6982692265/jobReport.json
[2026-02-01 15:16:42] 2026-02-01 20:16:04,158 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-02-01 15:16:42] 2026-02-01 20:16:04,159 | INFO     | this job has now completed (state=finished)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,159 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,159 | INFO     | log transfer has been attempted: DONE
[2026-02-01 15:16:42] 2026-02-01 20:16:04,160 | INFO     | job 6982692265 has finished - writing final server update
[2026-02-01 15:16:42] 2026-02-01 20:16:04,160 | INFO     | total number of processed events: 400 (read)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,165 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6982692265/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,166 | INFO     | extracted standard info from prmon json
[2026-02-01 15:16:42] 2026-02-01 20:16:04,166 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 15:16:42] 2026-02-01 20:16:04,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 15:16:42] 2026-02-01 20:16:04,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 15:16:42] 2026-02-01 20:16:04,167 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 15:16:42] 2026-02-01 20:16:04,171 | INFO     | fitting pss+swap vs Time
[2026-02-01 15:16:42] 2026-02-01 20:16:04,172 | INFO     | sum of square deviations: 1294014960.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,173 | INFO     | sum of deviations: -7745386733.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,173 | INFO     | mean x: 1769972041.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,173 | INFO     | mean y: 2519208.453416149
[2026-02-01 15:16:42] 2026-02-01 20:16:04,174 | INFO     | intersect: 10596769188.486362
[2026-02-01 15:16:42] 2026-02-01 20:16:04,174 | INFO     | chi2: 1.5903260792404539
[2026-02-01 15:16:42] 2026-02-01 20:16:04,175 | INFO     | sum of square deviations: 1177156955.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,176 | INFO     | sum of deviations: -7156292256.499999
[2026-02-01 15:16:42] 2026-02-01 20:16:04,176 | INFO     | mean x: 1769971888.5
[2026-02-01 15:16:42] 2026-02-01 20:16:04,176 | INFO     | mean y: 2519977.480769231
[2026-02-01 15:16:42] 2026-02-01 20:16:04,176 | INFO     | intersect: 10762713056.317253
[2026-02-01 15:16:42] 2026-02-01 20:16:04,177 | INFO     | chi2: 1.5899662142816822
[2026-02-01 15:16:42] 2026-02-01 20:16:04,177 | INFO     | current chi2=1.5899662142816822 (change=0.02262837561863974 %)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,177 | INFO     | right removable region: 155
[2026-02-01 15:16:42] 2026-02-01 20:16:04,177 | INFO     | sum of square deviations: 1177156955.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,179 | INFO     | sum of deviations: -31177828248.499996
[2026-02-01 15:16:42] 2026-02-01 20:16:04,179 | INFO     | mean x: 1769972193.5
[2026-02-01 15:16:42] 2026-02-01 20:16:04,179 | INFO     | mean y: 2549342.8397435895
[2026-02-01 15:16:42] 2026-02-01 20:16:04,179 | INFO     | intersect: 46881505304.63313
[2026-02-01 15:16:42] 2026-02-01 20:16:04,180 | INFO     | chi2: 0.17324318386312312
[2026-02-01 15:16:42] 2026-02-01 20:16:04,180 | INFO     | current chi2=0.17324318386312312 (change=89.10643633877496 %)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,180 | INFO     | sum of square deviations: 1067554900.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,181 | INFO     | sum of deviations: -30634126312.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,182 | INFO     | mean x: 1769972346.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,182 | INFO     | mean y: 2548511.2450331124
[2026-02-01 15:16:42] 2026-02-01 20:16:04,182 | INFO     | intersect: 50792963520.450615
[2026-02-01 15:16:42] 2026-02-01 20:16:04,182 | INFO     | chi2: 0.15237473242990496
[2026-02-01 15:16:42] 2026-02-01 20:16:04,183 | INFO     | current chi2=0.15237473242990496 (change=12.045756126085758 %)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,183 | INFO     | left removable region: 20
[2026-02-01 15:16:42] 2026-02-01 20:16:04,183 | INFO     | sum of square deviations: 762879420.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,184 | INFO     | sum of deviations: -20792232897.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,184 | INFO     | mean x: 1769972468.0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,184 | INFO     | mean y: 2536661.592592593
[2026-02-01 15:16:42] 2026-02-01 20:16:04,185 | INFO     | intersect: 48243030258.77716
[2026-02-01 15:16:42] 2026-02-01 20:16:04,185 | INFO     | chi2: 0.13909361103676093
[2026-02-01 15:16:42] 2026-02-01 20:16:04,185 | INFO     | current memory leak: -27.25 B/s (using 135 data points, chi2=0.14)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,186 | INFO     | could have reported an average CPU frequency of 2483 MHz (9 samples)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,186 | INFO     | ..............................
[2026-02-01 15:16:42] 2026-02-01 20:16:04,186 | INFO     | . Timing measurements:
[2026-02-01 15:16:42] 2026-02-01 20:16:04,186 | INFO     | . get job = 0 s
[2026-02-01 15:16:42] 2026-02-01 20:16:04,187 | INFO     | . initial setup = 5 s
[2026-02-01 15:16:42] 2026-02-01 20:16:04,187 | INFO     | . payload setup = 4 s
[2026-02-01 15:16:42] 2026-02-01 20:16:04,187 | INFO     | . stage-in = 0 s
[2026-02-01 15:16:42] 2026-02-01 20:16:04,187 | INFO     | . payload execution = 9801 s
[2026-02-01 15:16:42] 2026-02-01 20:16:04,187 | INFO     | . stage-out = 0 s
[2026-02-01 15:16:42] 2026-02-01 20:16:04,187 | INFO     | . log creation = 0 s
[2026-02-01 15:16:42] 2026-02-01 20:16:04,188 | INFO     | ..............................
[2026-02-01 15:16:42] 2026-02-01 20:16:04,472 | INFO     | 
[2026-02-01 15:16:42] 2026-02-01 20:16:04,472 | INFO     | job summary report
[2026-02-01 15:16:42] 2026-02-01 20:16:04,472 | INFO     | --------------------------------------------------
[2026-02-01 15:16:42] 2026-02-01 20:16:04,472 | INFO     | PanDA job id: 6982692265
[2026-02-01 15:16:42] 2026-02-01 20:16:04,472 | INFO     | task id: 48310826
[2026-02-01 15:16:42] 2026-02-01 20:16:04,472 | INFO     | errors: (none)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,472 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 15:16:42] 2026-02-01 20:16:04,472 | INFO     | pilot state: finished 
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | transexitcode: 0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | exeerrorcode: 0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | exeerrordiag: 
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | exitcode: 0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | exitmsg: OK
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | cpuconsumptiontime: 74072 s
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | nevents: 400
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | neventsw: 0
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | pid: 21465
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | pgrp: 21465
[2026-02-01 15:16:42] 2026-02-01 20:16:04,473 | INFO     | corecount: 8
[2026-02-01 15:16:42] 2026-02-01 20:16:04,474 | INFO     | event service: False
[2026-02-01 15:16:42] 2026-02-01 20:16:04,474 | INFO     | sizes: {0: 2278218, 1: 2278278, 11: 2278306, 9809: 2306935, 9810: 2306934, 9811: 2315988, 9812: 2316172, 9813: 2316430}
[2026-02-01 15:16:42] 2026-02-01 20:16:04,474 | INFO     | --------------------------------------------------
[2026-02-01 15:16:42] 2026-02-01 20:16:04,474 | INFO     | 
[2026-02-01 15:16:42] 2026-02-01 20:16:04,474 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-01 15:16:42] 2026-02-01 20:16:04,494 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,494 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,495 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,495 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,497 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,498 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 15:16:42] 2026-02-01 20:16:04,498 | INFO     | job 6982692265 has completed (purged errors)
[2026-02-01 15:16:42] 2026-02-01 20:16:04,498 | INFO     | overall cleanup function is called
[2026-02-01 15:16:42] 2026-02-01 20:16:05,508 | INFO     | --- collectZombieJob: --- 10, [21465]
[2026-02-01 15:16:42] 2026-02-01 20:16:05,508 | INFO     | zombie collector waiting for pid 21465
[2026-02-01 15:16:42] 2026-02-01 20:16:05,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 15:16:42] 2026-02-01 20:16:05,508 | INFO     | collected zombie processes
[2026-02-01 15:16:42] 2026-02-01 20:16:05,508 | INFO     | will attempt to kill all subprocesses of pid=21465
[2026-02-01 15:16:42] 2026-02-01 20:16:05,658 | INFO     | process IDs to be killed: [21465] (in reverse order)
[2026-02-01 15:16:42] 2026-02-01 20:16:05,721 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 15:16:42] 2026-02-01 20:16:05,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 15:16:42] 2026-02-01 20:16:05,727 | INFO     | did not find any defunct processes belonging to 21465
[2026-02-01 15:16:42] 2026-02-01 20:16:05,733 | INFO     | did not find any defunct processes belonging to 21465
[2026-02-01 15:16:42] 2026-02-01 20:16:05,733 | INFO     | ready for new job
[2026-02-01 15:16:42] 2026-02-01 20:16:05,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 15:16:42] 2026-02-01 20:16:05,735 | INFO     | **************************************
[2026-02-01 15:16:42] 2026-02-01 20:16:05,735 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 15:16:42] 2026-02-01 20:16:05,735 | INFO     | **************************************
[2026-02-01 15:16:42] 2026-02-01 20:16:05,736 | INFO     | 
[2026-02-01 15:16:42] 2026-02-01 20:16:05,737 | INFO     | architecture information:
[2026-02-01 15:16:42] 2026-02-01 20:16:05,737 | INFO     | executing command: cat /etc/os-release
[2026-02-01 15:16:42] 2026-02-01 20:16:05,751 | INFO     | cat /etc/os-release:
[2026-02-01 15:16:42] NAME="CentOS Linux"
[2026-02-01 15:16:42] VERSION="7 (Core)"
[2026-02-01 15:16:42] ID="centos"
[2026-02-01 15:16:42] ID_LIKE="rhel fedora"
[2026-02-01 15:16:42] VERSION_ID="7"
[2026-02-01 15:16:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 15:16:42] ANSI_COLOR="0;31"
[2026-02-01 15:16:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 15:16:42] HOME_URL="https://www.centos.org/"
[2026-02-01 15:16:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 15:16:42] 
[2026-02-01 15:16:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 15:16:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 15:16:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 15:16:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 15:16:42] 
[2026-02-01 15:16:42] 2026-02-01 20:16:05,752 | INFO     | **************************************
[2026-02-01 15:16:42] 2026-02-01 20:16:06,254 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-01 15:16:42] 2026-02-01 20:16:06,277 | INFO     | sufficient remaining disk space (26170359808 B)
[2026-02-01 15:16:42] 2026-02-01 20:16:06,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 15:16:42] 2026-02-01 20:16:06,278 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 15:16:42] 2026-02-01 20:16:06,278 | INFO     | update_server=False
[2026-02-01 15:16:42] 2026-02-01 20:16:06,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 15:16:42] 2026-02-01 20:16:06,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 15:16:42] 2026-02-01 20:16:06,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 15:16:42] 2026-02-01 20:16:06,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 15:16:42] 2026-02-01 20:16:06,279 | INFO     | aborting loop
[2026-02-01 15:16:42] 2026-02-01 20:16:06,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 15:16:42] 2026-02-01 20:16:06,552 | INFO     | all payload control threads have been joined
[2026-02-01 15:16:42] 2026-02-01 20:16:06,852 | INFO     | all data control threads have been joined
[2026-02-01 15:16:42] 2026-02-01 20:16:07,280 | INFO     | [job] retrieve thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:07,284 | INFO     | [job] queue monitor thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:07,285 | INFO     | [job] job monitor thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:07,445 | INFO     | [job] validate thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:07,557 | INFO     | [payload] control thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:07,579 | INFO     | [payload] validate_post thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:07,857 | INFO     | [data] control thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:07,913 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:07,955 | INFO     | all job control threads have been joined
[2026-02-01 15:16:42] 2026-02-01 20:16:08,247 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:08,287 | INFO     | [data] copytool_out thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:08,437 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:08,556 | INFO     | [payload] failed_post thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:08,594 | INFO     | [data] copytool_in thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:08,960 | INFO     | [job] control thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:10,288 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:16,380 | INFO     | job.realtimelogging is not enabled
[2026-02-01 15:16:42] 2026-02-01 20:16:17,385 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 15:16:42] 2026-02-01 20:16:35,940 | INFO     | [monitor] cgroup control has ended
[2026-02-01 15:16:42] 2026-02-01 20:16:36,405 | INFO     | PID=17026 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-01 15:16:42] 2026-02-01 20:16:36,405 | INFO     | .. there are 3 such processes running
[2026-02-01 15:16:42] 2026-02-01 20:16:36,405 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 15:16:42] 2026-02-01 20:16:36,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 15:16:42] 2026-02-01 20:16:36,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 15:16:42] 2026-02-01 20:16:36,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033888839488)>', '<ExcThread(monitor, started 140033180825344)>']
[2026-02-01 15:16:42] 2026-02-01 20:16:37,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 15:16:42] 2026-02-01 20:16:37,411 | INFO     | [monitor] control thread has ended
[2026-02-01 15:16:42] 2026-02-01 20:16:41,873 | INFO     | all workflow threads have been joined
[2026-02-01 15:16:42] 2026-02-01 20:16:41,874 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 15:16:42] 2026-02-01 20:16:41,874 | INFO     | traces error code: 0
[2026-02-01 15:16:42] 2026-02-01 20:16:41,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 15:16:42] 2026-02-01 20:16:41,994 [wrapper] ==== pilot stdout END ====
[2026-02-01 15:16:42] 2026-02-01 20:16:41,998 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 15:16:42] 2026-02-01 20:16:42,000 [wrapper] pilotpid: 17026
[2026-02-01 15:16:42] 2026-02-01 20:16:42,003 [wrapper] Pilot exit status: 0
[2026-02-01 15:16:42] 2026-02-01 20:16:42,013 [wrapper] pandaids: 6982692265
[2026-02-01 15:16:42] 2026-02-01 20:16:42,052 [wrapper] cleanup supervisor_pilot 23971 17027
[2026-02-01 15:16:42] 2026-02-01 20:16:42,054 [wrapper] Test setup, not cleaning
[2026-02-01 15:16:42] 2026-02-01 20:16:42,057 [wrapper] apfmon messages muted
[2026-02-01 15:16:42] 2026-02-01 20:16:42,059 [wrapper] ==== wrapper stdout END ====
[2026-02-01 15:16:42] 2026-02-01 20:16:42,062 [wrapper] ==== wrapper stderr END ====
[2026-02-01 15:16:42]  *** Error codes and diagnostics ***
[2026-02-01 15:16:42]     "exeErrorCode": 0,
[2026-02-01 15:16:42]     "exeErrorDiag": "",
[2026-02-01 15:16:42]     "pilotErrorCode": 0,
[2026-02-01 15:16:42]     "pilotErrorDiag": "",
[2026-02-01 15:16:42]  *** Listing of results directory ***
[2026-02-01 15:16:42] total 663420
[2026-02-01 15:16:42] -rwx------ 1 boincer umatlas     36322 Jan 25 01:27 runpilot2-wrapper.sh
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 01:28 queuedata.json
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 01:28 pilot3.tar.gz
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas       100 Feb  1 12:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 15:16:42] -rwxr-xr-x 1 boincer umatlas      7986 Feb  1 12:32 run_atlas
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas       105 Feb  1 12:32 job.xml
[2026-02-01 15:16:42] -rw-r--r-- 2 boincer umatlas 493280310 Feb  1 12:32 EVNT.48310824._000122.pool.root.1
[2026-02-01 15:16:42] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 12:32 start_atlas.sh
[2026-02-01 15:16:42] drwxrwx--x 2 boincer umatlas      4096 Feb  1 12:32 shared
[2026-02-01 15:16:42] -rw-r--r-- 2 boincer umatlas    597757 Feb  1 12:32 input.tar.gz
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas         0 Feb  1 12:32 boinc_lockfile
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas      2526 Feb  1 12:32 pandaJob.out
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas        57 Feb  1 12:32 setup.sh.local
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas   1009765 Feb  1 12:32 agis_schedconf.cvmfs.json
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas   1511668 Feb  1 12:32 agis_ddmendpoints.agis.ALL.json
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas       432 Feb  1 12:32 workernode_map.json
[2026-02-01 15:16:42] drwx------ 5 boincer umatlas      4096 Feb  1 12:32 pilot3
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas      5949 Feb  1 15:11 init_data.xml
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas       530 Feb  1 15:15 boinc_task_state.xml
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas 178462851 Feb  1 15:15 HITS.48310826._010213.pool.root.1
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas      1053 Feb  1 15:15 memory_monitor_summary.json
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas    440059 Feb  1 15:16 log.48310826._010213.job.log.tgz.1
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas      6415 Feb  1 15:16 heartbeat.json
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas        95 Feb  1 15:16 pilot_heartbeat.json
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas      8192 Feb  1 15:16 boinc_mmap_file
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas        27 Feb  1 15:16 wrapper_checkpoint.txt
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas      4889 Feb  1 15:16 pilotlog.txt
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas   1390176 Feb  1 15:16 log.48310826._010213.job.log.1
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas       357 Feb  1 15:16 output.list
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas       620 Feb  1 15:16 runtime_log
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas   1843200 Feb  1 15:16 result.tar.gz
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas      9336 Feb  1 15:16 runtime_log.err
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas       657 Feb  1 15:16 45AODmTm838n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7J0KDmbo4uFo.diag
[2026-02-01 15:16:42] -rw-r--r-- 1 boincer umatlas     21235 Feb  1 15:16 stderr.txt
[2026-02-01 15:16:42] HITS file was successfully produced:
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas 178462851 Feb  1 15:15 shared/HITS.pool.root.1
[2026-02-01 15:16:42]  *** Contents of shared directory: ***
[2026-02-01 15:16:42] total 658408
[2026-02-01 15:16:42] -rw-r--r-- 2 boincer umatlas 493280310 Feb  1 12:32 ATLAS.root_0
[2026-02-01 15:16:42] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 12:32 start_atlas.sh
[2026-02-01 15:16:42] -rw-r--r-- 2 boincer umatlas    597757 Feb  1 12:32 input.tar.gz
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas 178462851 Feb  1 15:15 HITS.pool.root.1
[2026-02-01 15:16:42] -rw------- 1 boincer umatlas   1843200 Feb  1 15:16 result.tar.gz
15:16:44 (13048): run_atlas exited; CPU time 74184.145868
15:16:44 (13048): called boinc_finish(0)

</stderr_txt>
]]>

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