Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:57:05 (3648617): wrapper (7.7.26015): starting
05:57:05 (3648617): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 05:57:05] Arguments: --nthreads 4
[2026-02-04 05:57:05] Threads: 4
[2026-02-04 05:57:05] Checking for CVMFS
[2026-02-04 05:57:05] No cvmfs_config command found, will try listing directly
[2026-02-04 05:57:05] CVMFS is ok
[2026-02-04 05:57:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 05:57:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 05:57:05] Further information can be found at the LHC@home message board.
[2026-02-04 05:57:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 05:57:05] Checking for apptainer binary...
[2026-02-04 05:57:05] which: no apptainer in ((null))
[2026-02-04 05:57:05] apptainer is not installed, using version from CVMFS
[2026-02-04 05:57:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 05:57:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-04 05:57:06] apptainer works
[2026-02-04 05:57:06] Set ATHENA_PROC_NUMBER=4
[2026-02-04 05:57:06] Set ATHENA_CORE_NUMBER=4
[2026-02-04 05:57:06] Starting ATLAS job with PandaID=6992352951
[2026-02-04 05:57:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 07:40:39]  *** The last 200 lines of the pilot log: ***
[2026-02-04 07:40:39] 2026-02-04 06:39:51,410 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3384263/.job.ad'
[2026-02-04 07:40:39] 2026-02-04 06:39:51,410 | INFO     | total number of processed events: 400 (read)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,435 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6992352951/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,436 | INFO     | extracted standard info from prmon json
[2026-02-04 07:40:39] 2026-02-04 06:39:51,436 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 07:40:39] 2026-02-04 06:39:51,436 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 07:40:39] 2026-02-04 06:39:51,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 07:40:39] 2026-02-04 06:39:51,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 07:40:39] 2026-02-04 06:39:51,439 | INFO     | fitting pss+swap vs Time
[2026-02-04 07:40:39] 2026-02-04 06:39:51,439 | INFO     | sum of square deviations: 319447850.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,440 | INFO     | sum of deviations: 4345647747.000001
[2026-02-04 07:40:39] 2026-02-04 06:39:51,440 | INFO     | mean x: 1770184119.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,440 | INFO     | mean y: 2275428.792079208
[2026-02-04 07:40:39] 2026-02-04 06:39:51,440 | INFO     | intersect: -24078639902.168926
[2026-02-04 07:40:39] 2026-02-04 06:39:51,440 | INFO     | chi2: 2.002471327376983
[2026-02-04 07:40:39] 2026-02-04 06:39:51,440 | INFO     | sum of square deviations: 274312120.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,441 | INFO     | sum of deviations: 10304938681.000002
[2026-02-04 07:40:39] 2026-02-04 06:39:51,441 | INFO     | mean x: 1770183966.5
[2026-02-04 07:40:39] 2026-02-04 06:39:51,441 | INFO     | mean y: 2294706.7708333335
[2026-02-04 07:40:39] 2026-02-04 06:39:51,441 | INFO     | intersect: -66497272388.08396
[2026-02-04 07:40:39] 2026-02-04 06:39:51,442 | INFO     | chi2: 1.1836882424317197
[2026-02-04 07:40:39] 2026-02-04 06:39:51,442 | INFO     | current chi2=1.1836882424317197 (change=40.88862965232961 %)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,442 | INFO     | sum of square deviations: 233641590.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,443 | INFO     | sum of deviations: 9806118257.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,443 | INFO     | mean x: 1770183814.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,443 | INFO     | mean y: 2292834.659340659
[2026-02-04 07:40:39] 2026-02-04 06:39:51,443 | INFO     | intersect: -74293691098.30092
[2026-02-04 07:40:39] 2026-02-04 06:39:51,443 | INFO     | chi2: 1.1856709811793482
[2026-02-04 07:40:39] 2026-02-04 06:39:51,443 | INFO     | current chi2=1.1856709811793482 (change=-0.16750514844646075 %)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,443 | INFO     | right removable region: 90
[2026-02-04 07:40:39] 2026-02-04 06:39:51,443 | INFO     | sum of square deviations: 274312120.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,444 | INFO     | sum of deviations: -6477931447.5
[2026-02-04 07:40:39] 2026-02-04 06:39:51,444 | INFO     | mean x: 1770184271.5
[2026-02-04 07:40:39] 2026-02-04 06:39:51,444 | INFO     | mean y: 2310982.03125
[2026-02-04 07:40:39] 2026-02-04 06:39:51,444 | INFO     | intersect: 41805539946.977196
[2026-02-04 07:40:39] 2026-02-04 06:39:51,444 | INFO     | chi2: 0.8571387560803692
[2026-02-04 07:40:39] 2026-02-04 06:39:51,445 | INFO     | current chi2=0.8571387560803692 (change=57.19595360183626 %)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,445 | INFO     | sum of square deviations: 233641590.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,445 | INFO     | sum of deviations: -5665798401.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,445 | INFO     | mean x: 1770184424.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,445 | INFO     | mean y: 2307915.054945055
[2026-02-04 07:40:39] 2026-02-04 06:39:51,445 | INFO     | intersect: 42929203246.37976
[2026-02-04 07:40:39] 2026-02-04 06:39:51,446 | INFO     | chi2: 0.857694769523888
[2026-02-04 07:40:39] 2026-02-04 06:39:51,446 | INFO     | current chi2=0.857694769523888 (change=-0.06486854544548448 %)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,446 | INFO     | left removable region: 20
[2026-02-04 07:40:39] 2026-02-04 06:39:51,446 | INFO     | sum of square deviations: 106336877.5
[2026-02-04 07:40:39] 2026-02-04 06:39:51,446 | INFO     | sum of deviations: 141169128.0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,447 | INFO     | mean x: 1770184393.5
[2026-02-04 07:40:39] 2026-02-04 06:39:51,447 | INFO     | mean y: 2332171.7714285715
[2026-02-04 07:40:39] 2026-02-04 06:39:51,447 | INFO     | intersect: -2347702859.3926554
[2026-02-04 07:40:39] 2026-02-04 06:39:51,447 | INFO     | chi2: 0.0003175919317956544
[2026-02-04 07:40:39] 2026-02-04 06:39:51,447 | INFO     | current memory leak: 1.33 B/s (using 70 data points, chi2=0.00)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,447 | INFO     | could have reported an average CPU frequency of 2731 MHz (7 samples)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | ..............................
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | . Timing measurements:
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | . get job = 0 s
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | . initial setup = 6 s
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | . payload setup = 7 s
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | . stage-in = 0 s
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | . payload execution = 6119 s
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | . stage-out = 0 s
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | . log creation = 0 s
[2026-02-04 07:40:39] 2026-02-04 06:39:51,448 | INFO     | ..............................
[2026-02-04 07:40:39] 2026-02-04 06:39:51,684 | INFO     | 
[2026-02-04 07:40:39] 2026-02-04 06:39:51,684 | INFO     | job summary report
[2026-02-04 07:40:39] 2026-02-04 06:39:51,684 | INFO     | --------------------------------------------------
[2026-02-04 07:40:39] 2026-02-04 06:39:51,684 | INFO     | PanDA job id: 6992352951
[2026-02-04 07:40:39] 2026-02-04 06:39:51,684 | INFO     | task id: 48310749
[2026-02-04 07:40:39] 2026-02-04 06:39:51,684 | INFO     | errors: (none)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,684 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | pilot state: finished 
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | transexitcode: 0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | exeerrorcode: 0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | exeerrordiag: 
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | exitcode: 0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | exitmsg: OK
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | cpuconsumptiontime: 23237 s
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | nevents: 400
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | neventsw: 0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | pid: 3657865
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | pgrp: 3657865
[2026-02-04 07:40:39] 2026-02-04 06:39:51,685 | INFO     | corecount: 4
[2026-02-04 07:40:39] 2026-02-04 06:39:51,686 | INFO     | event service: False
[2026-02-04 07:40:39] 2026-02-04 06:39:51,686 | INFO     | sizes: {0: 2277799, 1: 2278260, 11: 2278260, 6131: 2305195, 6132: 2314215, 6134: 2314271, 6137: 2314593}
[2026-02-04 07:40:39] 2026-02-04 06:39:51,686 | INFO     | --------------------------------------------------
[2026-02-04 07:40:39] 2026-02-04 06:39:51,686 | INFO     | 
[2026-02-04 07:40:39] 2026-02-04 06:39:51,686 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-02-04 07:40:39] 2026-02-04 06:39:51,703 | INFO     | time since job start (6148s) is within the limit (349056.0s)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,719 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | job 6992352951 has completed (purged errors)
[2026-02-04 07:40:39] 2026-02-04 06:39:51,721 | INFO     | overall cleanup function is called
[2026-02-04 07:40:39] 2026-02-04 06:39:52,730 | INFO     | --- collectZombieJob: --- 10, [3657865]
[2026-02-04 07:40:39] 2026-02-04 06:39:52,730 | INFO     | zombie collector waiting for pid 3657865
[2026-02-04 07:40:39] 2026-02-04 06:39:52,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 07:40:39] 2026-02-04 06:39:52,730 | INFO     | collected zombie processes
[2026-02-04 07:40:39] 2026-02-04 06:39:52,730 | INFO     | will attempt to kill all subprocesses of pid=3657865
[2026-02-04 07:40:39] 2026-02-04 06:39:53,463 | INFO     | process IDs to be killed: [3657865] (in reverse order)
[2026-02-04 07:40:39] 2026-02-04 06:39:53,724 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 07:40:39] 2026-02-04 06:39:53,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 07:40:39] 2026-02-04 06:39:53,752 | INFO     | did not find any defunct processes belonging to 3657865
[2026-02-04 07:40:39] 2026-02-04 06:39:53,775 | INFO     | did not find any defunct processes belonging to 3657865
[2026-02-04 07:40:39] 2026-02-04 06:39:53,775 | INFO     | ready for new job
[2026-02-04 07:40:39] 2026-02-04 06:39:53,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 07:40:39] 2026-02-04 06:39:53,777 | INFO     | **************************************
[2026-02-04 07:40:39] 2026-02-04 06:39:53,778 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 07:40:39] 2026-02-04 06:39:53,778 | INFO     | **************************************
[2026-02-04 07:40:39] 2026-02-04 06:39:53,778 | INFO     | 
[2026-02-04 07:40:39] 2026-02-04 06:39:53,786 | INFO     | architecture information:
[2026-02-04 07:40:39] 2026-02-04 06:39:53,787 | INFO     | executing command: cat /etc/os-release
[2026-02-04 07:40:39] 2026-02-04 06:39:53,816 | INFO     | cat /etc/os-release:
[2026-02-04 07:40:39] NAME="CentOS Linux"
[2026-02-04 07:40:39] VERSION="7 (Core)"
[2026-02-04 07:40:39] ID="centos"
[2026-02-04 07:40:39] ID_LIKE="rhel fedora"
[2026-02-04 07:40:39] VERSION_ID="7"
[2026-02-04 07:40:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 07:40:39] ANSI_COLOR="0;31"
[2026-02-04 07:40:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 07:40:39] HOME_URL="https://www.centos.org/"
[2026-02-04 07:40:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 07:40:39] 
[2026-02-04 07:40:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 07:40:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 07:40:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 07:40:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 07:40:39] 
[2026-02-04 07:40:39] 2026-02-04 06:39:53,817 | INFO     | **************************************
[2026-02-04 07:40:39] 2026-02-04 06:39:54,319 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-02-04 07:40:39] 2026-02-04 06:39:54,344 | INFO     | sufficient remaining disk space (3235823747072 B)
[2026-02-04 07:40:39] 2026-02-04 06:39:54,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 07:40:39] 2026-02-04 06:39:54,345 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 07:40:39] 2026-02-04 06:39:54,345 | INFO     | update_server=False
[2026-02-04 07:40:39] 2026-02-04 06:39:54,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 07:40:39] 2026-02-04 06:39:54,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:40:39] 2026-02-04 06:39:54,346 | INFO     | aborting loop
[2026-02-04 07:40:39] 2026-02-04 06:39:54,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 07:40:39] 2026-02-04 06:39:54,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 07:40:39] 2026-02-04 06:39:55,231 | INFO     | all data control threads have been joined
[2026-02-04 07:40:39] 2026-02-04 06:39:55,351 | INFO     | [job] retrieve thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:55,351 | INFO     | [job] job monitor thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:55,370 | INFO     | all payload control threads have been joined
[2026-02-04 07:40:39] 2026-02-04 06:39:55,466 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:55,950 | INFO     | [job] validate thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:55,965 | INFO     | all job control threads have been joined
[2026-02-04 07:40:39] 2026-02-04 06:39:56,045 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:56,157 | INFO     | [payload] validate_post thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:56,236 | INFO     | [data] control thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:56,313 | INFO     | [payload] failed_post thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:56,339 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:56,377 | INFO     | [payload] control thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:56,498 | INFO     | [data] copytool_out thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:56,515 | INFO     | [data] copytool_in thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:56,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:40:39] 2026-02-04 06:39:56,970 | INFO     | [job] control thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:57,559 | INFO     | [job] queue monitor thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:39:58,759 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:40:04,913 | INFO     | job.realtimelogging is not enabled
[2026-02-04 07:40:39] 2026-02-04 06:40:05,921 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 07:40:39] 2026-02-04 06:40:25,638 | INFO     | PID=3652866 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 07:40:39] 2026-02-04 06:40:25,638 | INFO     | .. there are 23 such processes running
[2026-02-04 07:40:39] 2026-02-04 06:40:25,639 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 07:40:39] 2026-02-04 06:40:25,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 07:40:39] 2026-02-04 06:40:25,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 07:40:39] 2026-02-04 06:40:32,640 | INFO     | [monitor] cgroup control has ended
[2026-02-04 07:40:39] 2026-02-04 06:40:33,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22914406373184)>', '<ExcThread(monitor, started 22914165647104)>']
[2026-02-04 07:40:39] 2026-02-04 06:40:34,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 07:40:39] 2026-02-04 06:40:34,684 | INFO     | [monitor] control thread has ended
[2026-02-04 07:40:39] 2026-02-04 06:40:38,872 | INFO     | all workflow threads have been joined
[2026-02-04 07:40:39] 2026-02-04 06:40:38,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 07:40:39] 2026-02-04 06:40:38,872 | INFO     | traces error code: 0
[2026-02-04 07:40:39] 2026-02-04 06:40:38,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 07:40:39] 2026-02-04 06:40:39,013 [wrapper] ==== pilot stdout END ====
[2026-02-04 07:40:39] 2026-02-04 06:40:39,016 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 07:40:39] 2026-02-04 06:40:39,018 [wrapper] pilotpid: 3652866
[2026-02-04 07:40:39] 2026-02-04 06:40:39,021 [wrapper] Pilot exit status: 0
[2026-02-04 07:40:39] 2026-02-04 06:40:39,036 [wrapper] pandaids: 6992352951
[2026-02-04 07:40:39] 2026-02-04 06:40:39,190 [wrapper] cleanup supervisor_pilot 3990505 3652867
[2026-02-04 07:40:39] 2026-02-04 06:40:39,194 [wrapper] Test setup, not cleaning
[2026-02-04 07:40:39] 2026-02-04 06:40:39,198 [wrapper] apfmon messages muted
[2026-02-04 07:40:39] 2026-02-04 06:40:39,201 [wrapper] ==== wrapper stdout END ====
[2026-02-04 07:40:39] 2026-02-04 06:40:39,204 [wrapper] ==== wrapper stderr END ====
[2026-02-04 07:40:39]  *** Error codes and diagnostics ***
[2026-02-04 07:40:39]     "exeErrorCode": 0,
[2026-02-04 07:40:39]     "exeErrorDiag": "",
[2026-02-04 07:40:39]     "pilotErrorCode": 0,
[2026-02-04 07:40:39]     "pilotErrorDiag": "",
[2026-02-04 07:40:39]  *** Listing of results directory ***
[2026-02-04 07:40:39] total 662244
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc    584422 Feb  1 13:55 pilot3.tar.gz
[2026-02-04 07:40:39] -rwx------ 1 boinc boinc     36322 Feb  1 13:56 runpilot2-wrapper.sh
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc      5111 Feb  1 13:57 queuedata.json
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc       100 Feb  4 04:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 07:40:39] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 04:27 run_atlas
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc       105 Feb  4 04:27 job.xml
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc      6687 Feb  4 05:57 init_data.xml
[2026-02-04 07:40:39] -rw-r--r-- 2 boinc boinc 491410448 Feb  4 05:57 EVNT.48310747._000059.pool.root.1
[2026-02-04 07:40:39] -rw-r--r-- 2 boinc boinc     15845 Feb  4 05:57 start_atlas.sh
[2026-02-04 07:40:39] drwxrwx--x 2 boinc boinc      4096 Feb  4 05:57 shared
[2026-02-04 07:40:39] -rw-r--r-- 2 boinc boinc    597759 Feb  4 05:57 input.tar.gz
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc         0 Feb  4 05:57 boinc_lockfile
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc      2522 Feb  4 05:57 pandaJob.out
[2026-02-04 07:40:39] -rw------- 1 boinc boinc   1009236 Feb  4 05:57 agis_schedconf.cvmfs.json
[2026-02-04 07:40:39] -rw------- 1 boinc boinc   1511668 Feb  4 05:57 agis_ddmendpoints.agis.ALL.json
[2026-02-04 07:40:39] -rw------- 1 boinc boinc       443 Feb  4 05:57 workernode_map.json
[2026-02-04 07:40:39] drwx------ 5 boinc boinc      4096 Feb  4 05:57 pilot3
[2026-02-04 07:40:39] -rw------- 1 boinc boinc 180404492 Feb  4 07:39 HITS.48310749._002925.pool.root.1
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc       530 Feb  4 07:39 boinc_task_state.xml
[2026-02-04 07:40:39] -rw------- 1 boinc boinc      1020 Feb  4 07:39 memory_monitor_summary.json
[2026-02-04 07:40:39] -rw------- 1 boinc boinc    302175 Feb  4 07:39 log.48310749._002925.job.log.tgz.1
[2026-02-04 07:40:39] -rw------- 1 boinc boinc      6341 Feb  4 07:39 heartbeat.json
[2026-02-04 07:40:39] -rw------- 1 boinc boinc        95 Feb  4 07:40 pilot_heartbeat.json
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc      8192 Feb  4 07:40 boinc_mmap_file
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc        27 Feb  4 07:40 wrapper_checkpoint.txt
[2026-02-04 07:40:39] -rw------- 1 boinc boinc      4903 Feb  4 07:40 pilotlog.txt
[2026-02-04 07:40:39] -rw------- 1 boinc boinc    885506 Feb  4 07:40 log.48310749._002925.job.log.1
[2026-02-04 07:40:39] -rw------- 1 boinc boinc       357 Feb  4 07:40 output.list
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc       620 Feb  4 07:40 runtime_log
[2026-02-04 07:40:39] -rw------- 1 boinc boinc   1208320 Feb  4 07:40 result.tar.gz
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc      9204 Feb  4 07:40 runtime_log.err
[2026-02-04 07:40:39] -rw------- 1 boinc boinc       662 Feb  4 07:40 PAdKDmeBm68n9Rq4apOajLDm4fhM0noT9bVooX4SDmnvPKDmlG1nLn.diag
[2026-02-04 07:40:39] -rw-r--r-- 1 boinc boinc     20871 Feb  4 07:40 stderr.txt
[2026-02-04 07:40:39] HITS file was successfully produced:
[2026-02-04 07:40:39] -rw------- 1 boinc boinc 180404492 Feb  4 07:39 shared/HITS.pool.root.1
[2026-02-04 07:40:39]  *** Contents of shared directory: ***
[2026-02-04 07:40:39] total 657864
[2026-02-04 07:40:39] -rw-r--r-- 2 boinc boinc 491410448 Feb  4 05:57 ATLAS.root_0
[2026-02-04 07:40:39] -rw-r--r-- 2 boinc boinc     15845 Feb  4 05:57 start_atlas.sh
[2026-02-04 07:40:39] -rw-r--r-- 2 boinc boinc    597759 Feb  4 05:57 input.tar.gz
[2026-02-04 07:40:39] -rw------- 1 boinc boinc 180404492 Feb  4 07:39 HITS.pool.root.1
[2026-02-04 07:40:39] -rw------- 1 boinc boinc   1208320 Feb  4 07:40 result.tar.gz
07:40:41 (3648617): run_atlas exited; CPU time 23509.533179
07:40:41 (3648617): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN