Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:28:14 (2147906): wrapper (7.7.26015): starting
12:28:14 (2147906): wrapper: running run_atlas (--nthreads 8)
[2026-02-01 12:28:14] Arguments: --nthreads 8
[2026-02-01 12:28:14] Threads: 8
[2026-02-01 12:28:14] Checking for CVMFS
[2026-02-01 12:28:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 12:28:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 12:28:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 12:28:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 12:28:16] 2.13.3.0 12210 55698 180488 155758 1 490 31840308 40960001 32719 16776704 0 381784568 99.745 262082344 46405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-01 12:28:16] CVMFS is ok
[2026-02-01 12:28:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 12:28:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 12:28:16] Further information can be found at the LHC@home message board.
[2026-02-01 12:28:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 12:28:16] Checking for apptainer binary...
[2026-02-01 12:28:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 12:28:16] Running /usr/bin/apptainer --version
[2026-02-01 12:28:17] apptainer version 1.4.5-2.el9
[2026-02-01 12:28:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 12:28:17] c-208-37.aglt2.org
[2026-02-01 12:28:17] apptainer works
[2026-02-01 12:28:18] Set ATHENA_PROC_NUMBER=8
[2026-02-01 12:28:18] Set ATHENA_CORE_NUMBER=8
[2026-02-01 12:28:18] Starting ATLAS job with PandaID=6991476528
[2026-02-01 12:28:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 13:31:24]  *** The last 200 lines of the pilot log: ***
[2026-02-01 13:31:24]  guid=bfed02c6-1f82-4d01-85db-fc5240a49647
[2026-02-01 13:31:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-01 13:31:24]  is_altstaged=None
[2026-02-01 13:31:24]  is_tar=False
[2026-02-01 13:31:24]  lfn=log.48310749._001883.job.log.tgz.1
[2026-02-01 13:31:24]  mtime=0
[2026-02-01 13:31:24]  protocol_id=None
[2026-02-01 13:31:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 13:31:24]  replicas=None
[2026-02-01 13:31:24]  scope=mc23_13p6TeV
[2026-02-01 13:31:24]  status=None
[2026-02-01 13:31:24]  status_code=0
[2026-02-01 13:31:24]  storage_token=
[2026-02-01 13:31:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6991476528/log.48310749._001883.job.log.tgz.1
[2026-02-01 13:31:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/d2/log.48310749._001883.job.log.tgz.1
[2026-02-01 13:31:24]  workdir=None
[2026-02-01 13:31:24] ]
[2026-02-01 13:31:24] 2026-02-01 18:30:34,105 | INFO     | transferring file log.48310749._001883.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6991476528/log.48310749._001883.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-01 13:31:24] 2026-02-01 18:30:34,105 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6991476528/log.48310749._001883.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310749._001883.job
[2026-02-01 13:31:24] 2026-02-01 18:30:34,173 | INFO     | adding to output.list: log.48310749._001883.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/d2/log.48310749._001883.job.log.tg
[2026-02-01 13:31:24] 2026-02-01 18:30:34,174 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 13:31:24] 2026-02-01 18:30:34,174 | INFO     | summary of transferred files:
[2026-02-01 13:31:24] 2026-02-01 18:30:34,174 | INFO     |  -- lfn=log.48310749._001883.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 13:31:24] 2026-02-01 18:30:34,174 | INFO     | stage-out finished correctly
[2026-02-01 13:31:24] 2026-02-01 18:30:34,199 | INFO     | time since job start (3625s) is within the limit (349056.0s)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,065 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 13:31:24] 2026-02-01 18:30:35,277 | INFO     | job 6991476528 has state=finished
[2026-02-01 13:31:24] 2026-02-01 18:30:35,277 | INFO     | preparing for final server update for job 6991476528 in state='finished'
[2026-02-01 13:31:24] 2026-02-01 18:30:35,277 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6991476528/jobReport.json
[2026-02-01 13:31:24] 2026-02-01 18:30:35,279 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-01 13:31:24] 2026-02-01 18:30:35,279 | INFO     | this job has now completed (state=finished)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,279 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,279 | INFO     | log transfer has been attempted: DONE
[2026-02-01 13:31:24] 2026-02-01 18:30:35,279 | INFO     | job 6991476528 has finished - writing final server update
[2026-02-01 13:31:24] 2026-02-01 18:30:35,279 | INFO     | total number of processed events: 400 (read)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,321 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6991476528/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,321 | INFO     | extracted standard info from prmon json
[2026-02-01 13:31:24] 2026-02-01 18:30:35,321 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 13:31:24] 2026-02-01 18:30:35,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 13:31:24] 2026-02-01 18:30:35,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 13:31:24] 2026-02-01 18:30:35,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 13:31:24] 2026-02-01 18:30:35,326 | INFO     | fitting pss+swap vs Time
[2026-02-01 13:31:24] 2026-02-01 18:30:35,326 | INFO     | sum of square deviations: 41117050.0
[2026-02-01 13:31:24] 2026-02-01 18:30:35,326 | INFO     | sum of deviations: -1703223517.0
[2026-02-01 13:31:24] 2026-02-01 18:30:35,326 | INFO     | mean x: 1769968931.0
[2026-02-01 13:31:24] 2026-02-01 18:30:35,326 | INFO     | mean y: 2607558.843137255
[2026-02-01 13:31:24] 2026-02-01 18:30:35,326 | INFO     | intersect: 73321406150.63293
[2026-02-01 13:31:24] 2026-02-01 18:30:35,326 | INFO     | chi2: 0.01786895934959796
[2026-02-01 13:31:24] 2026-02-01 18:30:35,326 | INFO     | current memory leak: -41.42 B/s (using 51 data points, chi2=0.02)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,326 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | ..............................
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | . Timing measurements:
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | . get job = 0 s
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | . initial setup = 40 s
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | . payload setup = 50 s
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | . stage-in = 0 s
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | . payload execution = 3554 s
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | . stage-out = 1 s
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | . log creation = 0 s
[2026-02-01 13:31:24] 2026-02-01 18:30:35,327 | INFO     | ..............................
[2026-02-01 13:31:24] 2026-02-01 18:30:35,493 | INFO     | 
[2026-02-01 13:31:24] 2026-02-01 18:30:35,493 | INFO     | job summary report
[2026-02-01 13:31:24] 2026-02-01 18:30:35,493 | INFO     | --------------------------------------------------
[2026-02-01 13:31:24] 2026-02-01 18:30:35,493 | INFO     | PanDA job id: 6991476528
[2026-02-01 13:31:24] 2026-02-01 18:30:35,493 | INFO     | task id: 48310749
[2026-02-01 13:31:24] 2026-02-01 18:30:35,493 | INFO     | errors: (none)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,493 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 13:31:24] 2026-02-01 18:30:35,493 | INFO     | pilot state: finished 
[2026-02-01 13:31:24] 2026-02-01 18:30:35,493 | INFO     | transexitcode: 0
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | exeerrorcode: 0
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | exeerrordiag: 
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | exitcode: 0
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | exitmsg: OK
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | cpuconsumptiontime: 20092 s
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | nevents: 400
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | neventsw: 0
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | pid: 2163434
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | pgrp: 2163434
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | corecount: 8
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | event service: False
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | sizes: {0: 2277131, 1: 2277816, 2: 2278249, 12: 2278277, 3608: 2304029, 3609: 2304028, 3612: 2313210, 3613: 2313460}
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | --------------------------------------------------
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | 
[2026-02-01 13:31:24] 2026-02-01 18:30:35,494 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-01 13:31:24] 2026-02-01 18:30:35,583 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,583 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,583 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,583 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | job 6991476528 has completed (purged errors)
[2026-02-01 13:31:24] 2026-02-01 18:30:35,584 | INFO     | overall cleanup function is called
[2026-02-01 13:31:24] 2026-02-01 18:30:36,056 | WARNING  | process 2163434 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 13:31:24] 2026-02-01 18:30:36,592 | INFO     | --- collectZombieJob: --- 10, [2163434]
[2026-02-01 13:31:24] 2026-02-01 18:30:36,592 | INFO     | zombie collector waiting for pid 2163434
[2026-02-01 13:31:24] 2026-02-01 18:30:36,592 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 13:31:24] 2026-02-01 18:30:36,592 | INFO     | collected zombie processes
[2026-02-01 13:31:24] 2026-02-01 18:30:36,592 | INFO     | will attempt to kill all subprocesses of pid=2163434
[2026-02-01 13:31:24] 2026-02-01 18:30:36,707 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 13:31:24] 2026-02-01 18:30:38,058 | INFO     | process IDs to be killed: [2163434] (in reverse order)
[2026-02-01 13:31:24] 2026-02-01 18:30:38,359 | INFO     | number of running child processes to parent process 2163434: 1
[2026-02-01 13:31:24] 2026-02-01 18:30:38,359 | INFO     | maximum number of monitored processes: 6
[2026-02-01 13:31:24] 2026-02-01 18:30:38,359 | INFO     | aborting job monitoring since job object (job id=6991476528) has expired
[2026-02-01 13:31:24] 2026-02-01 18:30:38,816 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 13:31:24] 2026-02-01 18:30:38,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 13:31:24] 2026-02-01 18:30:38,858 | INFO     | did not find any defunct processes belonging to 2163434
[2026-02-01 13:31:24] 2026-02-01 18:30:38,956 | INFO     | did not find any defunct processes belonging to 2163434
[2026-02-01 13:31:24] 2026-02-01 18:30:38,956 | INFO     | ready for new job
[2026-02-01 13:31:24] 2026-02-01 18:30:38,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 13:31:24] 2026-02-01 18:30:38,957 | INFO     | **************************************
[2026-02-01 13:31:24] 2026-02-01 18:30:38,958 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 13:31:24] 2026-02-01 18:30:38,958 | INFO     | **************************************
[2026-02-01 13:31:24] 2026-02-01 18:30:38,958 | INFO     | 
[2026-02-01 13:31:24] 2026-02-01 18:30:38,990 | INFO     | architecture information:
[2026-02-01 13:31:24] 2026-02-01 18:30:38,990 | INFO     | executing command: cat /etc/os-release
[2026-02-01 13:31:24] 2026-02-01 18:30:39,047 | INFO     | cat /etc/os-release:
[2026-02-01 13:31:24] NAME="CentOS Linux"
[2026-02-01 13:31:24] VERSION="7 (Core)"
[2026-02-01 13:31:24] ID="centos"
[2026-02-01 13:31:24] ID_LIKE="rhel fedora"
[2026-02-01 13:31:24] VERSION_ID="7"
[2026-02-01 13:31:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 13:31:24] ANSI_COLOR="0;31"
[2026-02-01 13:31:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 13:31:24] HOME_URL="https://www.centos.org/"
[2026-02-01 13:31:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 13:31:24] 
[2026-02-01 13:31:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 13:31:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 13:31:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 13:31:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 13:31:24] 
[2026-02-01 13:31:24] 2026-02-01 18:30:39,047 | INFO     | **************************************
[2026-02-01 13:31:24] 2026-02-01 18:30:39,551 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-01 13:31:24] 2026-02-01 18:30:39,606 | INFO     | sufficient remaining disk space (166511771648 B)
[2026-02-01 13:31:24] 2026-02-01 18:30:39,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 13:31:24] 2026-02-01 18:30:39,607 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 13:31:24] 2026-02-01 18:30:39,607 | INFO     | update_server=False
[2026-02-01 13:31:24] 2026-02-01 18:30:39,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 13:31:24] 2026-02-01 18:30:39,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 13:31:24] 2026-02-01 18:30:39,607 | INFO     | aborting loop
[2026-02-01 13:31:24] 2026-02-01 18:30:39,685 | INFO     | all data control threads have been joined
[2026-02-01 13:31:24] 2026-02-01 18:30:39,990 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 13:31:24] 2026-02-01 18:30:40,000 | INFO     | all payload control threads have been joined
[2026-02-01 13:31:24] 2026-02-01 18:30:40,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 13:31:24] 2026-02-01 18:30:40,516 | INFO     | all job control threads have been joined
[2026-02-01 13:31:24] 2026-02-01 18:30:40,613 | INFO     | [job] retrieve thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:40,617 | INFO     | [job] job monitor thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:40,629 | INFO     | [payload] validate_post thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:40,691 | INFO     | [data] control thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:40,708 | INFO     | [data] copytool_in thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:40,746 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:41,006 | INFO     | [payload] control thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:41,188 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:41,262 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:41,308 | INFO     | [job] validate thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:41,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 13:31:24] 2026-02-01 18:30:41,429 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:41,515 | INFO     | [job] queue monitor thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:41,522 | INFO     | [job] control thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:41,655 | INFO     | [payload] failed_post thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:42,002 | INFO     | [data] copytool_out thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:30:45,333 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 13:31:24] 2026-02-01 18:31:09,030 | INFO     | PID=2154955 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 13:31:24] 2026-02-01 18:31:09,030 | INFO     | .. there are 36 such processes running
[2026-02-01 13:31:24] 2026-02-01 18:31:09,031 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 13:31:24] 2026-02-01 18:31:09,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 13:31:24] 2026-02-01 18:31:09,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 13:31:24] 2026-02-01 18:31:15,260 | INFO     | [monitor] cgroup control has ended
[2026-02-01 13:31:24] 2026-02-01 18:31:17,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139942148556608)>', '<ExcThread(monitor, started 139941711443712)>']
[2026-02-01 13:31:24] 2026-02-01 18:31:18,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 13:31:24] 2026-02-01 18:31:18,088 | INFO     | [monitor] control thread has ended
[2026-02-01 13:31:24] 2026-02-01 18:31:22,308 | INFO     | all workflow threads have been joined
[2026-02-01 13:31:24] 2026-02-01 18:31:22,308 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 13:31:24] 2026-02-01 18:31:22,308 | INFO     | traces error code: 0
[2026-02-01 13:31:24] 2026-02-01 18:31:22,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 13:31:24] 2026-02-01 18:31:22,848 [wrapper] ==== pilot stdout END ====
[2026-02-01 13:31:24] 2026-02-01 18:31:22,871 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 13:31:24] 2026-02-01 18:31:22,900 [wrapper] pilotpid: 2154955
[2026-02-01 13:31:24] 2026-02-01 18:31:22,939 [wrapper] Pilot exit status: 0
[2026-02-01 13:31:24] 2026-02-01 18:31:23,061 [wrapper] pandaids: 6991476528
[2026-02-01 13:31:24] 2026-02-01 18:31:23,460 [wrapper] cleanup supervisor_pilot 2629287 2154956
[2026-02-01 13:31:24] 2026-02-01 18:31:23,482 [wrapper] Test setup, not cleaning
[2026-02-01 13:31:24] 2026-02-01 18:31:23,515 [wrapper] apfmon messages muted
[2026-02-01 13:31:24] 2026-02-01 18:31:23,542 [wrapper] ==== wrapper stdout END ====
[2026-02-01 13:31:24] 2026-02-01 18:31:23,593 [wrapper] ==== wrapper stderr END ====
[2026-02-01 13:31:24]  *** Error codes and diagnostics ***
[2026-02-01 13:31:24]     "exeErrorCode": 0,
[2026-02-01 13:31:24]     "exeErrorDiag": "",
[2026-02-01 13:31:24]     "pilotErrorCode": 0,
[2026-02-01 13:31:24]     "pilotErrorDiag": "",
[2026-02-01 13:31:24]  *** Listing of results directory ***
[2026-02-01 13:31:24] total 660460
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas    584422 Feb  1 06:00 pilot3.tar.gz
[2026-02-01 13:31:24] -rwx------. 1 boincer umatlas     36322 Feb  1 06:00 runpilot2-wrapper.sh
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas      5111 Feb  1 06:01 queuedata.json
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas       100 Feb  1 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 13:31:24] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  1 12:28 run_atlas
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas       105 Feb  1 12:28 job.xml
[2026-02-01 13:31:24] -rw-r--r--. 2 boincer umatlas 490344257 Feb  1 12:28 EVNT.48310747._000038.pool.root.1
[2026-02-01 13:31:24] drwxrwx--x. 2 boincer umatlas      4096 Feb  1 12:28 shared
[2026-02-01 13:31:24] -rw-r--r--. 2 boincer umatlas    597764 Feb  1 12:28 input.tar.gz
[2026-02-01 13:31:24] -rw-r--r--. 2 boincer umatlas     15845 Feb  1 12:28 start_atlas.sh
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas         0 Feb  1 12:28 boinc_lockfile
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas      2522 Feb  1 12:28 pandaJob.out
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas        57 Feb  1 12:28 setup.sh.local
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas   1009765 Feb  1 12:29 agis_schedconf.cvmfs.json
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas   1511668 Feb  1 12:29 agis_ddmendpoints.agis.ALL.json
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas       431 Feb  1 12:30 workernode_map.json
[2026-02-01 13:31:24] drwx------. 5 boincer umatlas      4096 Feb  1 12:30 pilot3
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas      7184 Feb  1 13:22 init_data.xml
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas 180299557 Feb  1 13:29 HITS.48310749._001883.pool.root.1
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas       530 Feb  1 13:29 boinc_task_state.xml
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas      1048 Feb  1 13:30 memory_monitor_summary.json
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas    336285 Feb  1 13:30 log.48310749._001883.job.log.tgz.1
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas      6358 Feb  1 13:30 heartbeat.json
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas        95 Feb  1 13:31 pilot_heartbeat.json
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas      8192 Feb  1 13:31 boinc_mmap_file
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas        27 Feb  1 13:31 wrapper_checkpoint.txt
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas      4821 Feb  1 13:31 pilotlog.txt
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas    523698 Feb  1 13:31 log.48310749._001883.job.log.1
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas       357 Feb  1 13:31 output.list
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas       620 Feb  1 13:31 runtime_log
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas    880640 Feb  1 13:31 result.tar.gz
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas      9341 Feb  1 13:31 runtime_log.err
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas       656 Feb  1 13:31 RrjMDmTNk68n9Rq4apOajLDm4fhM0noT9bVooX4SDmQhPKDmARO3Yn.diag
[2026-02-01 13:31:24] -rw-r--r--. 1 boincer umatlas     21417 Feb  1 13:31 stderr.txt
[2026-02-01 13:31:24] HITS file was successfully produced:
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas 180299557 Feb  1 13:29 shared/HITS.pool.root.1
[2026-02-01 13:31:24]  *** Contents of shared directory: ***
[2026-02-01 13:31:24] total 656396
[2026-02-01 13:31:24] -rw-r--r--. 2 boincer umatlas 490344257 Feb  1 12:28 ATLAS.root_0
[2026-02-01 13:31:24] -rw-r--r--. 2 boincer umatlas    597764 Feb  1 12:28 input.tar.gz
[2026-02-01 13:31:24] -rw-r--r--. 2 boincer umatlas     15845 Feb  1 12:28 start_atlas.sh
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas 180299557 Feb  1 13:29 HITS.pool.root.1
[2026-02-01 13:31:24] -rw-------. 1 boincer umatlas    880640 Feb  1 13:31 result.tar.gz
13:31:26 (2147906): run_atlas exited; CPU time 20215.740318
13:31:26 (2147906): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN