Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:13:56 (29228): wrapper (7.7.26015): starting
12:13:56 (29228): wrapper: running run_atlas (--nthreads 8)
[2026-02-01 12:13:56] Arguments: --nthreads 8
[2026-02-01 12:13:56] Threads: 8
[2026-02-01 12:13:56] Checking for CVMFS
[2026-02-01 12:13:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 12:13:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 12:13:56] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 12:13:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 12:13:56] 2.11.2.0 2919 151234 133760 155757 3 193 11211462 20275201 1 130560 0 36030795 99.801 10777555 29836 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-01 12:13:56] CVMFS is ok
[2026-02-01 12:13:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 12:13:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 12:13:56] Further information can be found at the LHC@home message board.
[2026-02-01 12:13:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 12:13:56] Checking for apptainer binary...
[2026-02-01 12:13:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 12:13:56] Running /usr/bin/apptainer --version
[2026-02-01 12:13:57] apptainer version 1.3.2-1.el7
[2026-02-01 12:13:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 12:13:58] c-204-17.aglt2.org
[2026-02-01 12:13:58] apptainer works
[2026-02-01 12:13:58] Set ATHENA_PROC_NUMBER=8
[2026-02-01 12:13:58] Set ATHENA_CORE_NUMBER=8
[2026-02-01 12:13:58] Starting ATLAS job with PandaID=6991385500
[2026-02-01 12:13:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 14:12:41]  *** The last 200 lines of the pilot log: ***
[2026-02-01 14:12:41] 2026-02-01 19:11:37,940 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 14:12:41] 2026-02-01 19:11:37,940 | INFO     | log transfer has been attempted: DONE
[2026-02-01 14:12:41] 2026-02-01 19:11:37,940 | INFO     | job 6991385500 has finished - writing final server update
[2026-02-01 14:12:41] 2026-02-01 19:11:37,941 | INFO     | total number of processed events: 400 (read)
[2026-02-01 14:12:41] 2026-02-01 19:11:37,943 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6991385500/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 14:12:41] 2026-02-01 19:11:37,943 | INFO     | extracted standard info from prmon json
[2026-02-01 14:12:41] 2026-02-01 19:11:37,944 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 14:12:41] 2026-02-01 19:11:37,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 14:12:41] 2026-02-01 19:11:37,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 14:12:41] 2026-02-01 19:11:37,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 14:12:41] 2026-02-01 19:11:37,947 | INFO     | fitting pss+swap vs Time
[2026-02-01 14:12:41] 2026-02-01 19:11:37,947 | INFO     | sum of square deviations: 471562330.0
[2026-02-01 14:12:41] 2026-02-01 19:11:37,948 | INFO     | sum of deviations: 15455147148.000006
[2026-02-01 14:12:41] 2026-02-01 19:11:37,948 | INFO     | mean x: 1769969566.0
[2026-02-01 14:12:41] 2026-02-01 19:11:37,948 | INFO     | mean y: 2487778.539130435
[2026-02-01 14:12:41] 2026-02-01 19:11:37,949 | INFO     | intersect: -58007107877.69513
[2026-02-01 14:12:41] 2026-02-01 19:11:37,949 | INFO     | chi2: 1.527991736940483
[2026-02-01 14:12:41] 2026-02-01 19:11:37,949 | INFO     | sum of square deviations: 412686807.5
[2026-02-01 14:12:41] 2026-02-01 19:11:37,950 | INFO     | sum of deviations: 15069986285.500004
[2026-02-01 14:12:41] 2026-02-01 19:11:37,950 | INFO     | mean x: 1769969413.5
[2026-02-01 14:12:41] 2026-02-01 19:11:37,950 | INFO     | mean y: 2486780.409090909
[2026-02-01 14:12:41] 2026-02-01 19:11:37,950 | INFO     | intersect: -64631066564.277084
[2026-02-01 14:12:41] 2026-02-01 19:11:37,951 | INFO     | chi2: 1.5291196679856855
[2026-02-01 14:12:41] 2026-02-01 19:11:37,951 | INFO     | current chi2=1.5291196679856855 (change=-0.07381787596973927 %)
[2026-02-01 14:12:41] 2026-02-01 19:11:37,951 | INFO     | right removable region: 109
[2026-02-01 14:12:41] 2026-02-01 19:11:37,951 | INFO     | sum of square deviations: 412686807.5
[2026-02-01 14:12:41] 2026-02-01 19:11:37,952 | INFO     | sum of deviations: -3186328625.5
[2026-02-01 14:12:41] 2026-02-01 19:11:37,952 | INFO     | mean x: 1769969718.5
[2026-02-01 14:12:41] 2026-02-01 19:11:37,952 | INFO     | mean y: 2535279.463636364
[2026-02-01 14:12:41] 2026-02-01 19:11:37,952 | INFO     | intersect: 13668359041.772121
[2026-02-01 14:12:41] 2026-02-01 19:11:37,953 | INFO     | chi2: 0.033501388765806356
[2026-02-01 14:12:41] 2026-02-01 19:11:37,953 | INFO     | current chi2=0.033501388765806356 (change=97.80748887864495 %)
[2026-02-01 14:12:41] 2026-02-01 19:11:37,953 | INFO     | sum of square deviations: 358927660.0
[2026-02-01 14:12:41] 2026-02-01 19:11:37,954 | INFO     | sum of deviations: -4819320493.999999
[2026-02-01 14:12:41] 2026-02-01 19:11:37,954 | INFO     | mean x: 1769969871.0
[2026-02-01 14:12:41] 2026-02-01 19:11:37,954 | INFO     | mean y: 2539782.0857142857
[2026-02-01 14:12:41] 2026-02-01 19:11:37,954 | INFO     | intersect: 23767919338.157917
[2026-02-01 14:12:41] 2026-02-01 19:11:37,954 | INFO     | chi2: 0.0077312680366999
[2026-02-01 14:12:41] 2026-02-01 19:11:37,954 | INFO     | current chi2=0.0077312680366999 (change=76.92254464211668 %)
[2026-02-01 14:12:41] 2026-02-01 19:11:37,955 | INFO     | sum of square deviations: 310052325.0
[2026-02-01 14:12:41] 2026-02-01 19:11:37,955 | INFO     | sum of deviations: -4733223660.499999
[2026-02-01 14:12:41] 2026-02-01 19:11:37,955 | INFO     | mean x: 1769970023.5
[2026-02-01 14:12:41] 2026-02-01 19:11:37,955 | INFO     | mean y: 2539510.45
[2026-02-01 14:12:41] 2026-02-01 19:11:37,956 | INFO     | intersect: 27022701328.639687
[2026-02-01 14:12:41] 2026-02-01 19:11:37,956 | INFO     | chi2: 0.006558160764965776
[2026-02-01 14:12:41] 2026-02-01 19:11:37,956 | INFO     | current chi2=0.006558160764965776 (change=15.17354289316383 %)
[2026-02-01 14:12:41] 2026-02-01 19:11:37,956 | INFO     | left removable region: 30
[2026-02-01 14:12:41] 2026-02-01 19:11:37,956 | INFO     | sum of square deviations: 152858680.0
[2026-02-01 14:12:41] 2026-02-01 19:11:37,957 | INFO     | sum of deviations: -3010990743.9999995
[2026-02-01 14:12:41] 2026-02-01 19:11:37,957 | INFO     | mean x: 1769970298.0
[2026-02-01 14:12:41] 2026-02-01 19:11:37,957 | INFO     | mean y: 2536321.025316456
[2026-02-01 14:12:41] 2026-02-01 19:11:37,957 | INFO     | intersect: 34867185056.922554
[2026-02-01 14:12:41] 2026-02-01 19:11:37,957 | INFO     | chi2: 0.005475565576705074
[2026-02-01 14:12:41] 2026-02-01 19:11:37,957 | INFO     | current memory leak: -19.70 B/s (using 79 data points, chi2=0.01)
[2026-02-01 14:12:41] 2026-02-01 19:11:37,958 | INFO     | could have reported an average CPU frequency of 1712 MHz (7 samples)
[2026-02-01 14:12:41] 2026-02-01 19:11:37,958 | INFO     | ..............................
[2026-02-01 14:12:41] 2026-02-01 19:11:37,958 | INFO     | . Timing measurements:
[2026-02-01 14:12:41] 2026-02-01 19:11:37,958 | INFO     | . get job = 0 s
[2026-02-01 14:12:41] 2026-02-01 19:11:37,958 | INFO     | . initial setup = 8 s
[2026-02-01 14:12:41] 2026-02-01 19:11:37,958 | INFO     | . payload setup = 8 s
[2026-02-01 14:12:41] 2026-02-01 19:11:37,958 | INFO     | . stage-in = 0 s
[2026-02-01 14:12:41] 2026-02-01 19:11:37,959 | INFO     | . payload execution = 7008 s
[2026-02-01 14:12:41] 2026-02-01 19:11:37,959 | INFO     | . stage-out = 1 s
[2026-02-01 14:12:41] 2026-02-01 19:11:37,959 | INFO     | . log creation = 0 s
[2026-02-01 14:12:41] 2026-02-01 19:11:37,959 | INFO     | ..............................
[2026-02-01 14:12:41] 2026-02-01 19:11:38,043 | INFO     | 
[2026-02-01 14:12:41] 2026-02-01 19:11:38,043 | INFO     | job summary report
[2026-02-01 14:12:41] 2026-02-01 19:11:38,043 | INFO     | --------------------------------------------------
[2026-02-01 14:12:41] 2026-02-01 19:11:38,044 | INFO     | PanDA job id: 6991385500
[2026-02-01 14:12:41] 2026-02-01 19:11:38,044 | INFO     | task id: 48310749
[2026-02-01 14:12:41] 2026-02-01 19:11:38,044 | INFO     | errors: (none)
[2026-02-01 14:12:41] 2026-02-01 19:11:38,044 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 14:12:41] 2026-02-01 19:11:38,044 | INFO     | pilot state: finished 
[2026-02-01 14:12:41] 2026-02-01 19:11:38,044 | INFO     | transexitcode: 0
[2026-02-01 14:12:41] 2026-02-01 19:11:38,045 | INFO     | exeerrorcode: 0
[2026-02-01 14:12:41] 2026-02-01 19:11:38,045 | INFO     | exeerrordiag: 
[2026-02-01 14:12:41] 2026-02-01 19:11:38,045 | INFO     | exitcode: 0
[2026-02-01 14:12:41] 2026-02-01 19:11:38,045 | INFO     | exitmsg: OK
[2026-02-01 14:12:41] 2026-02-01 19:11:38,045 | INFO     | cpuconsumptiontime: 51959 s
[2026-02-01 14:12:41] 2026-02-01 19:11:38,045 | INFO     | nevents: 400
[2026-02-01 14:12:41] 2026-02-01 19:11:38,046 | INFO     | neventsw: 0
[2026-02-01 14:12:41] 2026-02-01 19:11:38,046 | INFO     | pid: 5417
[2026-02-01 14:12:41] 2026-02-01 19:11:38,046 | INFO     | pgrp: 5417
[2026-02-01 14:12:41] 2026-02-01 19:11:38,046 | INFO     | corecount: 8
[2026-02-01 14:12:41] 2026-02-01 19:11:38,046 | INFO     | event service: False
[2026-02-01 14:12:41] 2026-02-01 19:11:38,046 | INFO     | sizes: {0: 2278015, 1: 2278221, 11: 2278249, 7020: 2305466, 7021: 2314464, 7023: 2314842}
[2026-02-01 14:12:41] 2026-02-01 19:11:38,047 | INFO     | --------------------------------------------------
[2026-02-01 14:12:41] 2026-02-01 19:11:38,047 | INFO     | 
[2026-02-01 14:12:41] 2026-02-01 19:11:38,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-01 14:12:41] 2026-02-01 19:11:38,076 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,077 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,077 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,077 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,080 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 14:12:41] 2026-02-01 19:11:38,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,080 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 14:12:41] 2026-02-01 19:11:38,080 | INFO     | job 6991385500 has completed (purged errors)
[2026-02-01 14:12:41] 2026-02-01 19:11:38,081 | INFO     | overall cleanup function is called
[2026-02-01 14:12:41] 2026-02-01 19:11:39,089 | INFO     | --- collectZombieJob: --- 10, [5417]
[2026-02-01 14:12:41] 2026-02-01 19:11:39,089 | INFO     | zombie collector waiting for pid 5417
[2026-02-01 14:12:41] 2026-02-01 19:11:39,089 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 14:12:41] 2026-02-01 19:11:39,090 | INFO     | collected zombie processes
[2026-02-01 14:12:41] 2026-02-01 19:11:39,090 | INFO     | will attempt to kill all subprocesses of pid=5417
[2026-02-01 14:12:41] 2026-02-01 19:11:39,179 | INFO     | process IDs to be killed: [5417] (in reverse order)
[2026-02-01 14:12:41] 2026-02-01 19:11:39,237 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 14:12:41] 2026-02-01 19:11:39,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 14:12:41] 2026-02-01 19:11:39,242 | INFO     | did not find any defunct processes belonging to 5417
[2026-02-01 14:12:41] 2026-02-01 19:11:39,245 | INFO     | did not find any defunct processes belonging to 5417
[2026-02-01 14:12:41] 2026-02-01 19:11:39,245 | INFO     | ready for new job
[2026-02-01 14:12:41] 2026-02-01 19:11:39,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 14:12:41] 2026-02-01 19:11:39,247 | INFO     | **************************************
[2026-02-01 14:12:41] 2026-02-01 19:11:39,247 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 14:12:41] 2026-02-01 19:11:39,247 | INFO     | **************************************
[2026-02-01 14:12:41] 2026-02-01 19:11:39,247 | INFO     | 
[2026-02-01 14:12:41] 2026-02-01 19:11:39,247 | INFO     | architecture information:
[2026-02-01 14:12:41] 2026-02-01 19:11:39,248 | INFO     | executing command: cat /etc/os-release
[2026-02-01 14:12:41] 2026-02-01 19:11:39,268 | INFO     | cat /etc/os-release:
[2026-02-01 14:12:41] NAME="CentOS Linux"
[2026-02-01 14:12:41] VERSION="7 (Core)"
[2026-02-01 14:12:41] ID="centos"
[2026-02-01 14:12:41] ID_LIKE="rhel fedora"
[2026-02-01 14:12:41] VERSION_ID="7"
[2026-02-01 14:12:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 14:12:41] ANSI_COLOR="0;31"
[2026-02-01 14:12:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 14:12:41] HOME_URL="https://www.centos.org/"
[2026-02-01 14:12:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 14:12:41] 
[2026-02-01 14:12:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 14:12:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 14:12:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 14:12:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 14:12:41] 
[2026-02-01 14:12:41] 2026-02-01 19:11:39,269 | INFO     | **************************************
[2026-02-01 14:12:41] 2026-02-01 19:11:39,772 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-01 14:12:41] 2026-02-01 19:11:39,793 | INFO     | sufficient remaining disk space (18005098496 B)
[2026-02-01 14:12:41] 2026-02-01 19:11:39,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 14:12:41] 2026-02-01 19:11:39,794 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 14:12:41] 2026-02-01 19:11:39,794 | INFO     | update_server=False
[2026-02-01 14:12:41] 2026-02-01 19:11:39,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 14:12:41] 2026-02-01 19:11:39,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 14:12:41] 2026-02-01 19:11:39,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 14:12:41] 2026-02-01 19:11:39,796 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 14:12:41] 2026-02-01 19:11:39,796 | INFO     | aborting loop
[2026-02-01 14:12:41] 2026-02-01 19:11:39,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 14:12:41] 2026-02-01 19:11:40,797 | INFO     | [job] queue monitor thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:40,800 | INFO     | [job] retrieve thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:40,800 | INFO     | [job] job monitor thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:40,819 | INFO     | all data control threads have been joined
[2026-02-01 14:12:41] 2026-02-01 19:11:40,836 | INFO     | all job control threads have been joined
[2026-02-01 14:12:41] 2026-02-01 19:11:40,901 | INFO     | all payload control threads have been joined
[2026-02-01 14:12:41] 2026-02-01 19:11:41,024 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:41,056 | INFO     | [payload] validate_post thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:41,169 | INFO     | [data] copytool_in thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:41,220 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:41,585 | INFO     | [payload] failed_post thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:41,803 | INFO     | [data] copytool_out thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:41,825 | INFO     | [data] control thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:41,842 | INFO     | [job] control thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:41,907 | INFO     | [payload] control thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:42,046 | INFO     | [job] validate thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:42,169 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:43,802 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:11:50,174 | INFO     | job.realtimelogging is not enabled
[2026-02-01 14:12:41] 2026-02-01 19:11:51,179 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 14:12:41] 2026-02-01 19:12:09,872 | INFO     | PID=789 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-02-01 14:12:41] 2026-02-01 19:12:09,873 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 14:12:41] 2026-02-01 19:12:09,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 14:12:41] 2026-02-01 19:12:09,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 14:12:41] 2026-02-01 19:12:34,378 | INFO     | [monitor] cgroup control has ended
[2026-02-01 14:12:41] 2026-02-01 19:12:35,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075544786752)>', '<ExcThread(monitor, started 140074377275136)>']
[2026-02-01 14:12:41] 2026-02-01 19:12:36,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 14:12:41] 2026-02-01 19:12:36,004 | INFO     | [monitor] control thread has ended
[2026-02-01 14:12:41] 2026-02-01 19:12:40,740 | INFO     | all workflow threads have been joined
[2026-02-01 14:12:41] 2026-02-01 19:12:40,740 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 14:12:41] 2026-02-01 19:12:40,741 | INFO     | traces error code: 0
[2026-02-01 14:12:41] 2026-02-01 19:12:40,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 14:12:41] 2026-02-01 19:12:40,862 [wrapper] ==== pilot stdout END ====
[2026-02-01 14:12:41] 2026-02-01 19:12:40,867 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 14:12:41] 2026-02-01 19:12:40,871 [wrapper] pilotpid: 789
[2026-02-01 14:12:41] 2026-02-01 19:12:40,875 [wrapper] Pilot exit status: 0
[2026-02-01 14:12:41] 2026-02-01 19:12:40,892 [wrapper] pandaids: 6991385500
[2026-02-01 14:12:41] 2026-02-01 19:12:40,943 [wrapper] cleanup supervisor_pilot 12220 790
[2026-02-01 14:12:41] 2026-02-01 19:12:40,949 [wrapper] Test setup, not cleaning
[2026-02-01 14:12:41] 2026-02-01 19:12:40,954 [wrapper] apfmon messages muted
[2026-02-01 14:12:41] 2026-02-01 19:12:40,958 [wrapper] ==== wrapper stdout END ====
[2026-02-01 14:12:41] 2026-02-01 19:12:40,962 [wrapper] ==== wrapper stderr END ====
[2026-02-01 14:12:41]  *** Error codes and diagnostics ***
[2026-02-01 14:12:41]     "exeErrorCode": 0,
[2026-02-01 14:12:41]     "exeErrorDiag": "",
[2026-02-01 14:12:41]     "pilotErrorCode": 0,
[2026-02-01 14:12:41]     "pilotErrorDiag": "",
[2026-02-01 14:12:41]  *** Listing of results directory ***
[2026-02-01 14:12:41] total 660720
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas    584422 Feb  1 06:00 pilot3.tar.gz
[2026-02-01 14:12:41] -rwx------ 1 boincer umatlas     36322 Feb  1 06:00 runpilot2-wrapper.sh
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas      5111 Feb  1 06:01 queuedata.json
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas       100 Feb  1 12:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 14:12:41] -rwxr-xr-x 1 boincer umatlas      7986 Feb  1 12:13 run_atlas
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas       105 Feb  1 12:13 job.xml
[2026-02-01 14:12:41] -rw-r--r-- 2 boincer umatlas 490581306 Feb  1 12:13 EVNT.48310747._000033.pool.root.1
[2026-02-01 14:12:41] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 12:13 start_atlas.sh
[2026-02-01 14:12:41] drwxrwx--x 2 boincer umatlas      4096 Feb  1 12:13 shared
[2026-02-01 14:12:41] -rw-r--r-- 2 boincer umatlas    597752 Feb  1 12:13 input.tar.gz
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas         0 Feb  1 12:13 boinc_lockfile
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas      2522 Feb  1 12:13 pandaJob.out
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas        57 Feb  1 12:13 setup.sh.local
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas   1010512 Feb  1 12:14 agis_schedconf.cvmfs.json
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas   1511668 Feb  1 12:14 agis_ddmendpoints.agis.ALL.json
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas       431 Feb  1 12:14 workernode_map.json
[2026-02-01 14:12:41] drwx------ 5 boincer umatlas      4096 Feb  1 12:14 pilot3
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas      5910 Feb  1 14:03 init_data.xml
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas 179268927 Feb  1 14:11 HITS.48310749._001649.pool.root.1
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas       530 Feb  1 14:11 boinc_task_state.xml
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas      1048 Feb  1 14:11 memory_monitor_summary.json
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas    398703 Feb  1 14:11 log.48310749._001649.job.log.tgz.1
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas      6401 Feb  1 14:11 heartbeat.json
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas        95 Feb  1 14:12 pilot_heartbeat.json
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas      8192 Feb  1 14:12 boinc_mmap_file
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas        27 Feb  1 14:12 wrapper_checkpoint.txt
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas      4812 Feb  1 14:12 pilotlog.txt
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas    993796 Feb  1 14:12 log.48310749._001649.job.log.1
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas       357 Feb  1 14:12 output.list
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas       620 Feb  1 14:12 runtime_log
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas   1413120 Feb  1 14:12 result.tar.gz
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas      9341 Feb  1 14:12 runtime_log.err
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas       658 Feb  1 14:12 mV6MDmFNk68n9Rq4apOajLDm4fhM0noT9bVooX4SDmEgPKDmdSVPon.diag
[2026-02-01 14:12:41] -rw-r--r-- 1 boincer umatlas     21006 Feb  1 14:12 stderr.txt
[2026-02-01 14:12:41] HITS file was successfully produced:
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas 179268927 Feb  1 14:11 shared/HITS.pool.root.1
[2026-02-01 14:12:41]  *** Contents of shared directory: ***
[2026-02-01 14:12:41] total 656136
[2026-02-01 14:12:41] -rw-r--r-- 2 boincer umatlas 490581306 Feb  1 12:13 ATLAS.root_0
[2026-02-01 14:12:41] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 12:13 start_atlas.sh
[2026-02-01 14:12:41] -rw-r--r-- 2 boincer umatlas    597752 Feb  1 12:13 input.tar.gz
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas 179268927 Feb  1 14:11 HITS.pool.root.1
[2026-02-01 14:12:41] -rw------- 1 boincer umatlas   1413120 Feb  1 14:12 result.tar.gz
14:12:43 (29228): run_atlas exited; CPU time 51918.083542
14:12:43 (29228): called boinc_finish(0)

</stderr_txt>
]]>

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