Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:12:56 (540128): wrapper (7.7.26015): starting
05:12:56 (540128): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 05:12:56] Arguments: --nthreads 4
[2026-02-02 05:12:56] Threads: 4
[2026-02-02 05:12:56] Checking for CVMFS
[2026-02-02 05:12:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 05:12:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 05:12:56] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 05:12:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 05:12:56] 2.9.2.0 3106 2993 93124 155772 0 50 25525579 36864000 0 130560 0 1509653 99.988 104857 7523 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-02 05:12:56] CVMFS is ok
[2026-02-02 05:12:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 05:12:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 05:12:56] Further information can be found at the LHC@home message board.
[2026-02-02 05:12:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 05:12:56] Checking for apptainer binary...
[2026-02-02 05:12:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 05:12:56] Running /usr/bin/apptainer --version
[2026-02-02 05:12:56] apptainer version 1.4.1-1.1
[2026-02-02 05:12:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 05:12:56] thA314a
[2026-02-02 05:12:56] apptainer works
[2026-02-02 05:12:56] Set ATHENA_PROC_NUMBER=4
[2026-02-02 05:12:56] Set ATHENA_CORE_NUMBER=4
[2026-02-02 05:12:56] Starting ATLAS job with PandaID=6995620492
[2026-02-02 05:12:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 06:25:19]  *** The last 200 lines of the pilot log: ***
[2026-02-02 06:25:19] 2026-02-02 05:24:26,788 | INFO     | update_server=False
[2026-02-02 06:25:19] 2026-02-02 05:24:26,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 06:25:19] 2026-02-02 05:24:26,788 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 06:25:19] 2026-02-02 05:24:26,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 06:25:19] 2026-02-02 05:24:26,882 | INFO     | all payload control threads have been joined
[2026-02-02 06:25:19] 2026-02-02 05:24:27,441 | INFO     | all data control threads have been joined
[2026-02-02 06:25:19] 2026-02-02 05:24:27,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 06:25:19] 2026-02-02 05:24:27,793 | INFO     | [job] retrieve thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:27,794 | INFO     | [job] queue monitor thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:27,860 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:27,888 | INFO     | [payload] control thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:27,962 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:28,017 | INFO     | [payload] failed_post thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:28,042 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:28,093 | INFO     | [data] copytool_in thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:28,291 | WARNING  | process 548751 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 06:25:19] 2026-02-02 05:24:28,306 | INFO     | all job control threads have been joined
[2026-02-02 06:25:19] 2026-02-02 05:24:28,323 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 06:25:19] 2026-02-02 05:24:28,362 | INFO     | number of running child processes to parent process 548751: 1
[2026-02-02 06:25:19] 2026-02-02 05:24:28,362 | INFO     | maximum number of monitored processes: 6
[2026-02-02 06:25:19] 2026-02-02 05:24:28,362 | INFO     | aborting job monitoring since job object (job id=6995620492) has expired
[2026-02-02 06:25:19] 2026-02-02 05:24:28,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 06:25:19] 2026-02-02 05:24:28,362 | INFO     | will abort loop
[2026-02-02 06:25:19] 2026-02-02 05:24:28,447 | INFO     | [data] control thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:28,584 | INFO     | [payload] validate_post thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:29,275 | INFO     | [job] validate thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:29,311 | INFO     | [job] control thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:29,368 | INFO     | [job] job monitor thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:29,754 | INFO     | [data] copytool_out thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:30,795 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:37,327 | INFO     | job.realtimelogging is not enabled
[2026-02-02 06:25:19] 2026-02-02 05:24:38,332 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 06:25:19] 2026-02-02 05:24:56,355 | INFO     | PID=544243 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 06:25:19] 2026-02-02 05:24:56,356 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 06:25:19] 2026-02-02 05:24:56,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 06:25:19] 2026-02-02 05:24:56,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 06:25:19] 2026-02-02 05:25:13,736 | INFO     | [monitor] cgroup control has ended
[2026-02-02 06:25:19] 2026-02-02 05:25:14,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593359087424)>', '<ExcThread(monitor, started 140592549959424)>']
[2026-02-02 06:25:19] 2026-02-02 05:25:14,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 06:25:19] 2026-02-02 05:25:14,450 | INFO     | [monitor] control thread has ended
[2026-02-02 06:25:19] 2026-02-02 05:25:19,302 | INFO     | all workflow threads have been joined
[2026-02-02 06:25:19] 2026-02-02 05:25:19,303 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 06:25:19] 2026-02-02 05:25:19,303 | INFO     | traces error code: 0
[2026-02-02 06:25:19] 2026-02-02 05:25:19,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 06:25:19] 2026-02-02 05:25:19,371 [wrapper] ==== pilot stdout END ====
[2026-02-02 06:25:19] 2026-02-02 05:25:19,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 06:25:19] 2026-02-02 05:25:19,379 [wrapper] pilotpid: 544243
[2026-02-02 06:25:19] 2026-02-02 05:25:19,383 [wrapper] Pilot exit status: 0
[2026-02-02 06:25:19] 2026-02-02 05:25:19,393 [wrapper] pandaids: 6995620492
[2026-02-02 06:25:19] 2026-02-02 05:25:19,415 [wrapper] cleanup supervisor_pilot  553845 544244
[2026-02-02 06:25:19] 2026-02-02 05:25:19,419 [wrapper] Test setup, not cleaning
[2026-02-02 06:25:19] 2026-02-02 05:25:19,423 [wrapper] apfmon messages muted
[2026-02-02 06:25:19] 2026-02-02 05:25:19,426 [wrapper] ==== wrapper stdout END ====
[2026-02-02 06:25:19] 2026-02-02 05:25:19,429 [wrapper] ==== wrapper stderr END ====
[2026-02-02 06:25:19]  *** Error codes and diagnostics ***
[2026-02-02 06:25:19]     "exeErrorCode": 0,
[2026-02-02 06:25:19]     "exeErrorDiag": "",
[2026-02-02 06:25:19]     "pilotErrorCode": 0,
[2026-02-02 06:25:19]     "pilotErrorDiag": "",
[2026-02-02 06:25:19]  *** Listing of results directory ***
[2026-02-02 06:25:19] total 664436
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc    584422 Feb  1 09:53 pilot3.tar.gz
[2026-02-02 06:25:19] -rwx------ 1 boinc boinc     36322 Feb  1 09:56 runpilot2-wrapper.sh
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc      5111 Feb  1 09:57 queuedata.json
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc       100 Feb  2 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 06:25:19] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 05:12 run_atlas
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc       105 Feb  2 05:12 job.xml
[2026-02-02 06:25:19] -rw-r--r-- 2 boinc boinc 493827209 Feb  2 05:12 EVNT.48317869._000309.pool.root.1
[2026-02-02 06:25:19] -rw-r--r-- 2 boinc boinc    597756 Feb  2 05:12 input.tar.gz
[2026-02-02 06:25:19] -rw-r--r-- 2 boinc boinc     15845 Feb  2 05:12 start_atlas.sh
[2026-02-02 06:25:19] drwxrwx--x 2 boinc boinc      4096 Feb  2 05:12 shared
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc         0 Feb  2 05:12 boinc_setup_complete
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc      6371 Feb  2 05:12 init_data.xml
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc         0 Feb  2 05:12 boinc_lockfile
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc      2518 Feb  2 05:12 pandaJob.out
[2026-02-02 06:25:19] -rw------- 1 boinc boinc   1009823 Feb  2 05:13 agis_schedconf.cvmfs.json
[2026-02-02 06:25:19] -rw------- 1 boinc boinc   1511668 Feb  2 05:13 agis_ddmendpoints.agis.ALL.json
[2026-02-02 06:25:19] -rw------- 1 boinc boinc       422 Feb  2 05:13 workernode_map.json
[2026-02-02 06:25:19] drwx------ 5 boinc boinc      4096 Feb  2 05:13 pilot3
[2026-02-02 06:25:19] -rw------- 1 boinc boinc 180829381 Feb  2 06:24 HITS.48317872._016889.pool.root.1
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc       530 Feb  2 06:24 boinc_task_state.xml
[2026-02-02 06:25:19] -rw------- 1 boinc boinc      1017 Feb  2 06:24 memory_monitor_summary.json
[2026-02-02 06:25:19] -rw------- 1 boinc boinc    266004 Feb  2 06:24 log.48317872._016889.job.log.tgz.1
[2026-02-02 06:25:19] -rw------- 1 boinc boinc      6303 Feb  2 06:24 heartbeat.json
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc        27 Feb  2 06:24 wrapper_checkpoint.txt
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc      8192 Feb  2 06:24 boinc_mmap_file
[2026-02-02 06:25:19] -rw------- 1 boinc boinc        95 Feb  2 06:24 pilot_heartbeat.json
[2026-02-02 06:25:19] -rw------- 1 boinc boinc      5341 Feb  2 06:25 pilotlog.txt
[2026-02-02 06:25:19] -rw------- 1 boinc boinc    633773 Feb  2 06:25 log.48317872._016889.job.log.1
[2026-02-02 06:25:19] -rw------- 1 boinc boinc       357 Feb  2 06:25 output.list
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc       620 Feb  2 06:25 runtime_log
[2026-02-02 06:25:19] -rw------- 1 boinc boinc    921600 Feb  2 06:25 result.tar.gz
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc      8901 Feb  2 06:25 runtime_log.err
[2026-02-02 06:25:19] -rw------- 1 boinc boinc       658 Feb  2 06:25 QVmMDmKRi68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmd0PKDmdk5ULn.diag
[2026-02-02 06:25:19] -rw-r--r-- 1 boinc boinc      8135 Feb  2 06:25 stderr.txt
[2026-02-02 06:25:19] HITS file was successfully produced:
[2026-02-02 06:25:19] -rw------- 1 boinc boinc 180829381 Feb  2 06:24 shared/HITS.pool.root.1
[2026-02-02 06:25:19]  *** Contents of shared directory: ***
[2026-02-02 06:25:19] total 660356
[2026-02-02 06:25:19] -rw-r--r-- 2 boinc boinc 493827209 Feb  2 05:12 ATLAS.root_0
[2026-02-02 06:25:19] -rw-r--r-- 2 boinc boinc    597756 Feb  2 05:12 input.tar.gz
[2026-02-02 06:25:19] -rw-r--r-- 2 boinc boinc     15845 Feb  2 05:12 start_atlas.sh
[2026-02-02 06:25:19] -rw------- 1 boinc boinc 180829381 Feb  2 06:24 HITS.pool.root.1
[2026-02-02 06:25:19] -rw------- 1 boinc boinc    921600 Feb  2 06:25 result.tar.gz
06:25:20 (540128): run_atlas exited; CPU time 16051.859634
06:25:20 (540128): called boinc_finish(0)

</stderr_txt>
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