Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:21:37 (597453): wrapper (7.7.26015): starting
15:21:37 (597453): wrapper: running run_atlas (--nthreads 5)
[2026-02-01 15:21:37] Arguments: --nthreads 5
[2026-02-01 15:21:37] Threads: 5
[2026-02-01 15:21:37] Checking for CVMFS
[2026-02-01 15:21:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 15:21:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 15:21:39] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 15:21:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 15:21:39] 2.11.0.0 180649 403 58068 155762 1 50 3700197 4096001 6454 130560 0 1267849 99.995 17682 4892 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-01 15:21:39] CVMFS is ok
[2026-02-01 15:21:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 15:21:39] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-01 15:21:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-01 15:21:39] Further information can be found at the LHC@home message board.
[2026-02-01 15:21:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 15:21:39] Checking for apptainer binary...
[2026-02-01 15:21:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 15:21:39] Running /usr/bin/apptainer --version
[2026-02-01 15:21:39] apptainer version 1.4.5
[2026-02-01 15:21:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 15:21:39] x32-linux4
[2026-02-01 15:21:39] apptainer works
[2026-02-01 15:21:39] Set ATHENA_PROC_NUMBER=5
[2026-02-01 15:21:39] Set ATHENA_CORE_NUMBER=5
[2026-02-01 15:21:39] Starting ATLAS job with PandaID=6991384817
[2026-02-01 15:21:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 17:17:37]  *** The last 200 lines of the pilot log: ***
[2026-02-01 17:17:37] 2026-02-01 22:17:05,544 | INFO     | this job has now completed (state=finished)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,544 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,544 | INFO     | log transfer has been attempted: DONE
[2026-02-01 17:17:37] 2026-02-01 22:17:05,545 | INFO     | job 6991384817 has finished - writing final server update
[2026-02-01 17:17:37] 2026-02-01 22:17:05,545 | INFO     | total number of processed events: 400 (read)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,553 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6991384817/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,553 | INFO     | extracted standard info from prmon json
[2026-02-01 17:17:37] 2026-02-01 22:17:05,553 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 17:17:37] 2026-02-01 22:17:05,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 17:17:37] 2026-02-01 22:17:05,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 17:17:37] 2026-02-01 22:17:05,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 17:17:37] 2026-02-01 22:17:05,555 | INFO     | fitting pss+swap vs Time
[2026-02-01 17:17:37] 2026-02-01 22:17:05,555 | INFO     | sum of square deviations: 447383272.0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,560 | INFO     | sum of deviations: -21845097105.999996
[2026-02-01 17:17:37] 2026-02-01 22:17:05,560 | INFO     | mean x: 1769980775.0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,560 | INFO     | mean y: 2504712.238938053
[2026-02-01 17:17:37] 2026-02-01 22:17:05,560 | INFO     | intersect: 86428181141.25868
[2026-02-01 17:17:37] 2026-02-01 22:17:05,560 | INFO     | chi2: 1.4727915350300593
[2026-02-01 17:17:37] 2026-02-01 22:17:05,560 | INFO     | sum of square deviations: 390582207.0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,561 | INFO     | sum of deviations: -19432806020.499996
[2026-02-01 17:17:37] 2026-02-01 22:17:05,561 | INFO     | mean x: 1769980622.5
[2026-02-01 17:17:37] 2026-02-01 22:17:05,561 | INFO     | mean y: 2511193.064814815
[2026-02-01 17:17:37] 2026-02-01 22:17:05,561 | INFO     | intersect: 88065125108.00522
[2026-02-01 17:17:37] 2026-02-01 22:17:05,561 | INFO     | chi2: 1.4701626896124254
[2026-02-01 17:17:37] 2026-02-01 22:17:05,561 | INFO     | current chi2=1.4701626896124254 (change=0.17849406077556793 %)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,561 | INFO     | right removable region: 107
[2026-02-01 17:17:37] 2026-02-01 22:17:05,561 | INFO     | sum of square deviations: 390582207.0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,562 | INFO     | sum of deviations: -34385922375.5
[2026-02-01 17:17:37] 2026-02-01 22:17:05,562 | INFO     | mean x: 1769980927.5
[2026-02-01 17:17:37] 2026-02-01 22:17:05,562 | INFO     | mean y: 2537358.7685185187
[2026-02-01 17:17:37] 2026-02-01 22:17:05,562 | INFO     | intersect: 155827420541.76126
[2026-02-01 17:17:37] 2026-02-01 22:17:05,562 | INFO     | chi2: 0.14489054000087917
[2026-02-01 17:17:37] 2026-02-01 22:17:05,562 | INFO     | current chi2=0.14489054000087917 (change=90.1621827288733 %)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,562 | INFO     | sum of square deviations: 338804492.0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,563 | INFO     | sum of deviations: -31233895636.0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,567 | INFO     | mean x: 1769981080.0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,567 | INFO     | mean y: 2528052.281553398
[2026-02-01 17:17:37] 2026-02-01 22:17:05,567 | INFO     | intersect: 163174521446.08392
[2026-02-01 17:17:37] 2026-02-01 22:17:05,567 | INFO     | chi2: 0.13979137522146026
[2026-02-01 17:17:37] 2026-02-01 22:17:05,567 | INFO     | current chi2=0.13979137522146026 (change=3.519322089204697 %)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,567 | INFO     | left removable region: 20
[2026-02-01 17:17:37] 2026-02-01 22:17:05,567 | INFO     | sum of square deviations: 204163828.0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,568 | INFO     | sum of deviations: -21628411808.000004
[2026-02-01 17:17:37] 2026-02-01 22:17:05,568 | INFO     | mean x: 1769981202.0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,568 | INFO     | mean y: 2512751.6666666665
[2026-02-01 17:17:37] 2026-02-01 22:17:05,568 | INFO     | intersect: 187508216892.7295
[2026-02-01 17:17:37] 2026-02-01 22:17:05,568 | INFO     | chi2: 0.12112805217710908
[2026-02-01 17:17:37] 2026-02-01 22:17:05,568 | INFO     | current memory leak: -105.94 B/s (using 87 data points, chi2=0.12)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,568 | INFO     | could have reported an average CPU frequency of 3824 MHz (7 samples)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,568 | INFO     | ..............................
[2026-02-01 17:17:37] 2026-02-01 22:17:05,569 | INFO     | . Timing measurements:
[2026-02-01 17:17:37] 2026-02-01 22:17:05,569 | INFO     | . get job = 0 s
[2026-02-01 17:17:37] 2026-02-01 22:17:05,569 | INFO     | . initial setup = 10 s
[2026-02-01 17:17:37] 2026-02-01 22:17:05,569 | INFO     | . payload setup = 10 s
[2026-02-01 17:17:37] 2026-02-01 22:17:05,569 | INFO     | . stage-in = 0 s
[2026-02-01 17:17:37] 2026-02-01 22:17:05,569 | INFO     | . payload execution = 6869 s
[2026-02-01 17:17:37] 2026-02-01 22:17:05,569 | INFO     | . stage-out = 0 s
[2026-02-01 17:17:37] 2026-02-01 22:17:05,569 | INFO     | . log creation = 0 s
[2026-02-01 17:17:37] 2026-02-01 22:17:05,569 | INFO     | ..............................
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | 
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | job summary report
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | --------------------------------------------------
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | PanDA job id: 6991384817
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | task id: 48310840
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | errors: (none)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | pilot state: finished 
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | transexitcode: 0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | exeerrorcode: 0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,652 | INFO     | exeerrordiag: 
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | exitcode: 0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | exitmsg: OK
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | cpuconsumptiontime: 27523 s
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | nevents: 400
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | neventsw: 0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | pid: 606202
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | pgrp: 606202
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | corecount: 5
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | event service: False
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | sizes: {0: 2278021, 1: 2278255, 11: 2278255, 6883: 2305326, 6884: 2305325, 6885: 2314715}
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | --------------------------------------------------
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | 
[2026-02-01 17:17:37] 2026-02-01 22:17:05,653 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-02-01 17:17:37] 2026-02-01 22:17:05,679 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,679 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,679 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,679 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 17:17:37] 2026-02-01 22:17:05,680 | INFO     | job 6991384817 has completed (purged errors)
[2026-02-01 17:17:37] 2026-02-01 22:17:05,681 | INFO     | overall cleanup function is called
[2026-02-01 17:17:37] 2026-02-01 22:17:06,690 | INFO     | --- collectZombieJob: --- 10, [606202]
[2026-02-01 17:17:37] 2026-02-01 22:17:06,690 | INFO     | zombie collector waiting for pid 606202
[2026-02-01 17:17:37] 2026-02-01 22:17:06,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 17:17:37] 2026-02-01 22:17:06,690 | INFO     | collected zombie processes
[2026-02-01 17:17:37] 2026-02-01 22:17:06,690 | INFO     | will attempt to kill all subprocesses of pid=606202
[2026-02-01 17:17:37] 2026-02-01 22:17:06,932 | INFO     | process IDs to be killed: [606202] (in reverse order)
[2026-02-01 17:17:37] 2026-02-01 22:17:06,987 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 17:17:37] 2026-02-01 22:17:06,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 17:17:37] 2026-02-01 22:17:06,994 | INFO     | did not find any defunct processes belonging to 606202
[2026-02-01 17:17:37] 2026-02-01 22:17:07,006 | INFO     | did not find any defunct processes belonging to 606202
[2026-02-01 17:17:37] 2026-02-01 22:17:07,006 | INFO     | ready for new job
[2026-02-01 17:17:37] 2026-02-01 22:17:07,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 17:17:37] 2026-02-01 22:17:07,008 | INFO     | **************************************
[2026-02-01 17:17:37] 2026-02-01 22:17:07,008 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 17:17:37] 2026-02-01 22:17:07,008 | INFO     | **************************************
[2026-02-01 17:17:37] 2026-02-01 22:17:07,008 | INFO     | 
[2026-02-01 17:17:37] 2026-02-01 22:17:07,009 | INFO     | architecture information:
[2026-02-01 17:17:37] 2026-02-01 22:17:07,009 | INFO     | executing command: cat /etc/os-release
[2026-02-01 17:17:37] 2026-02-01 22:17:07,029 | INFO     | cat /etc/os-release:
[2026-02-01 17:17:37] NAME="CentOS Linux"
[2026-02-01 17:17:37] VERSION="7 (Core)"
[2026-02-01 17:17:37] ID="centos"
[2026-02-01 17:17:37] ID_LIKE="rhel fedora"
[2026-02-01 17:17:37] VERSION_ID="7"
[2026-02-01 17:17:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 17:17:37] ANSI_COLOR="0;31"
[2026-02-01 17:17:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 17:17:37] HOME_URL="https://www.centos.org/"
[2026-02-01 17:17:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 17:17:37] 
[2026-02-01 17:17:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 17:17:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 17:17:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 17:17:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 17:17:37] 
[2026-02-01 17:17:37] 2026-02-01 22:17:07,029 | INFO     | **************************************
[2026-02-01 17:17:37] 2026-02-01 22:17:07,532 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-02-01 17:17:37] 2026-02-01 22:17:07,552 | INFO     | sufficient remaining disk space (127489015808 B)
[2026-02-01 17:17:37] 2026-02-01 22:17:07,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 17:17:37] 2026-02-01 22:17:07,553 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 17:17:37] 2026-02-01 22:17:07,553 | INFO     | update_server=False
[2026-02-01 17:17:37] 2026-02-01 22:17:07,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 17:17:37] 2026-02-01 22:17:07,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:17:37] 2026-02-01 22:17:07,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 17:17:37] 2026-02-01 22:17:07,598 | INFO     | all data control threads have been joined
[2026-02-01 17:17:37] 2026-02-01 22:17:08,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 17:17:37] 2026-02-01 22:17:08,326 | WARNING  | process 606202 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 17:17:37] 2026-02-01 22:17:08,501 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 17:17:37] 2026-02-01 22:17:08,558 | INFO     | [job] queue monitor thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:08,558 | INFO     | [job] retrieve thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:08,603 | INFO     | [data] control thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:08,689 | INFO     | [payload] failed_post thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:08,711 | INFO     | all payload control threads have been joined
[2026-02-01 17:17:37] 2026-02-01 22:17:08,718 | INFO     | number of running child processes to parent process 606202: 1
[2026-02-01 17:17:37] 2026-02-01 22:17:08,718 | INFO     | maximum number of monitored processes: 6
[2026-02-01 17:17:37] 2026-02-01 22:17:08,719 | INFO     | aborting job monitoring since job object (job id=6991384817) has expired
[2026-02-01 17:17:37] 2026-02-01 22:17:08,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:17:37] 2026-02-01 22:17:08,719 | INFO     | will abort loop
[2026-02-01 17:17:37] 2026-02-01 22:17:08,910 | INFO     | all job control threads have been joined
[2026-02-01 17:17:37] 2026-02-01 22:17:08,990 | INFO     | [job] validate thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:09,381 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:09,420 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:09,594 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:09,716 | INFO     | [payload] control thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:09,728 | INFO     | [job] job monitor thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:09,818 | INFO     | [data] copytool_in thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:09,915 | INFO     | [job] control thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:09,999 | INFO     | [payload] validate_post thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:10,223 | INFO     | [data] copytool_out thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:11,562 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:18,355 | INFO     | job.realtimelogging is not enabled
[2026-02-01 17:17:37] 2026-02-01 22:17:19,360 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 17:17:37] 2026-02-01 22:17:20,074 | INFO     | [monitor] cgroup control has ended
[2026-02-01 17:17:37] 2026-02-01 22:17:21,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125042639644480)>', '<ExcThread(monitor, started 125041924630272)>']
[2026-02-01 17:17:37] 2026-02-01 22:17:26,516 | INFO     | all workflow threads have been joined
[2026-02-01 17:17:37] 2026-02-01 22:17:26,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 17:17:37] 2026-02-01 22:17:26,516 | INFO     | traces error code: 0
[2026-02-01 17:17:37] 2026-02-01 22:17:26,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 17:17:37] 2026-02-01 22:17:37,040 | INFO     | PID=601634 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 17:17:37] 2026-02-01 22:17:37,040 | INFO     | .. there are 8 such processes running
[2026-02-01 17:17:37] 2026-02-01 22:17:37,040 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 17:17:37] 2026-02-01 22:17:37,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 17:17:37] 2026-02-01 22:17:37,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 17:17:37] 2026-02-01 22:17:37,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 17:17:37] 2026-02-01 22:17:37,041 | INFO     | [monitor] control thread has ended
[2026-02-01 17:17:37] 2026-02-01 22:17:37,211 [wrapper] ==== pilot stdout END ====
[2026-02-01 17:17:37] 2026-02-01 22:17:37,214 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 17:17:37] 2026-02-01 22:17:37,218 [wrapper] pilotpid: 601634
[2026-02-01 17:17:37] 2026-02-01 22:17:37,222 [wrapper] Pilot exit status: 0
[2026-02-01 17:17:37] 2026-02-01 22:17:37,239 [wrapper] pandaids: 6991384817
[2026-02-01 17:17:37] 2026-02-01 22:17:37,316 [wrapper] cleanup supervisor_pilot  705110 601635
[2026-02-01 17:17:37] 2026-02-01 22:17:37,323 [wrapper] Test setup, not cleaning
[2026-02-01 17:17:37] 2026-02-01 22:17:37,329 [wrapper] apfmon messages muted
[2026-02-01 17:17:37] 2026-02-01 22:17:37,336 [wrapper] ==== wrapper stdout END ====
[2026-02-01 17:17:37] 2026-02-01 22:17:37,341 [wrapper] ==== wrapper stderr END ====
[2026-02-01 17:17:37]  *** Error codes and diagnostics ***
[2026-02-01 17:17:37]     "exeErrorCode": 0,
[2026-02-01 17:17:37]     "exeErrorDiag": "",
[2026-02-01 17:17:37]     "pilotErrorCode": 0,
[2026-02-01 17:17:37]     "pilotErrorDiag": "",
[2026-02-01 17:17:37]  *** Listing of results directory ***
[2026-02-01 17:17:37] total 722964
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc    584422 Feb  1 06:00 pilot3.tar.gz
[2026-02-01 17:17:37] -rwx------ 1 boinc boinc     36322 Feb  1 06:01 runpilot2-wrapper.sh
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc      5111 Feb  1 06:04 queuedata.json
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc       100 Feb  1 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 17:17:37] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 15:21 run_atlas
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc       105 Feb  1 15:21 job.xml
[2026-02-01 17:17:37] -rw-r--r-- 2 boinc boinc 536648819 Feb  1 15:21 EVNT.48310836._000050.pool.root.1
[2026-02-01 17:17:37] -rw-r--r-- 2 boinc boinc     15845 Feb  1 15:21 start_atlas.sh
[2026-02-01 17:17:37] drwxrwx--x 2 boinc boinc      4096 Feb  1 15:21 shared
[2026-02-01 17:17:37] -rw-r--r-- 2 boinc boinc    597764 Feb  1 15:21 input.tar.gz
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc      9741 Feb  1 15:21 init_data.xml
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc         0 Feb  1 15:21 boinc_setup_complete
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc         0 Feb  1 15:21 boinc_lockfile
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc      2502 Feb  1 15:21 pandaJob.out
[2026-02-01 17:17:37] -rw------- 1 boinc boinc   1009757 Feb  1 15:21 agis_schedconf.cvmfs.json
[2026-02-01 17:17:37] -rw------- 1 boinc boinc   1511668 Feb  1 15:21 agis_ddmendpoints.agis.ALL.json
[2026-02-01 17:17:37] -rw------- 1 boinc boinc       424 Feb  1 15:22 workernode_map.json
[2026-02-01 17:17:37] drwx------ 5 boinc boinc      4096 Feb  1 15:22 pilot3
[2026-02-01 17:17:37] -rw------- 1 boinc boinc 197112513 Feb  1 17:16 HITS.48310840._002871.pool.root.1
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc       530 Feb  1 17:16 boinc_task_state.xml
[2026-02-01 17:17:37] -rw------- 1 boinc boinc        95 Feb  1 17:16 pilot_heartbeat.json
[2026-02-01 17:17:37] -rw------- 1 boinc boinc      1025 Feb  1 17:17 memory_monitor_summary.json
[2026-02-01 17:17:37] -rw------- 1 boinc boinc    305289 Feb  1 17:17 log.48310840._002871.job.log.tgz.1
[2026-02-01 17:17:37] -rw------- 1 boinc boinc      6296 Feb  1 17:17 heartbeat.json
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc      8192 Feb  1 17:17 boinc_mmap_file
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc        27 Feb  1 17:17 wrapper_checkpoint.txt
[2026-02-01 17:17:37] -rw------- 1 boinc boinc       821 Feb  1 17:17 pilotlog.txt
[2026-02-01 17:17:37] -rw------- 1 boinc boinc   1000980 Feb  1 17:17 log.48310840._002871.job.log.1
[2026-02-01 17:17:37] -rw------- 1 boinc boinc       357 Feb  1 17:17 output.list
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc       620 Feb  1 17:17 runtime_log
[2026-02-01 17:17:37] -rw------- 1 boinc boinc   1320960 Feb  1 17:17 result.tar.gz
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc      8891 Feb  1 17:17 runtime_log.err
[2026-02-01 17:17:37] -rw------- 1 boinc boinc       644 Feb  1 17:17 osFNDmsNk68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmE9PKDmsgusNn.diag
[2026-02-01 17:17:37] -rw-r--r-- 1 boinc boinc     21292 Feb  1 17:17 stderr.txt
[2026-02-01 17:17:37] HITS file was successfully produced:
[2026-02-01 17:17:37] -rw------- 1 boinc boinc 197112513 Feb  1 17:16 shared/HITS.pool.root.1
[2026-02-01 17:17:37]  *** Contents of shared directory: ***
[2026-02-01 17:17:37] total 718468
[2026-02-01 17:17:37] -rw-r--r-- 2 boinc boinc 536648819 Feb  1 15:21 ATLAS.root_0
[2026-02-01 17:17:37] -rw-r--r-- 2 boinc boinc     15845 Feb  1 15:21 start_atlas.sh
[2026-02-01 17:17:37] -rw-r--r-- 2 boinc boinc    597764 Feb  1 15:21 input.tar.gz
[2026-02-01 17:17:37] -rw------- 1 boinc boinc 197112513 Feb  1 17:16 HITS.pool.root.1
[2026-02-01 17:17:37] -rw------- 1 boinc boinc   1320960 Feb  1 17:17 result.tar.gz
17:17:38 (597453): run_atlas exited; CPU time 27627.939699
17:17:38 (597453): called boinc_finish(0)

</stderr_txt>
]]>

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