Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:58:11 (228666): wrapper (7.7.26015): starting
02:58:11 (228666): wrapper: running run_atlas (--nthreads 4)
[2026-02-03 02:58:11] Arguments: --nthreads 4
[2026-02-03 02:58:11] Threads: 4
[2026-02-03 02:58:11] Checking for CVMFS
[2026-02-03 02:58:11] No cvmfs_config command found, will try listing directly
[2026-02-03 02:58:11] CVMFS is ok
[2026-02-03 02:58:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 02:58:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 02:58:11] Further information can be found at the LHC@home message board.
[2026-02-03 02:58:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 02:58:11] Checking for apptainer binary...
[2026-02-03 02:58:11] which: no apptainer in ((null))
[2026-02-03 02:58:11] apptainer is not installed, using version from CVMFS
[2026-02-03 02:58:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 02:58:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-02-03 02:58:11] apptainer works
[2026-02-03 02:58:11] Set ATHENA_PROC_NUMBER=4
[2026-02-03 02:58:11] Set ATHENA_CORE_NUMBER=4
[2026-02-03 02:58:11] Starting ATLAS job with PandaID=6991964969
[2026-02-03 02:58:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 05:44:27]  *** The last 200 lines of the pilot log: ***
[2026-02-03 05:44:27] 2026-02-03 04:31:52,504 | INFO     | log transfer has been attempted: DONE
[2026-02-03 05:44:27] 2026-02-03 04:31:52,505 | INFO     | job 6991964969 has finished - writing final server update
[2026-02-03 05:44:27] 2026-02-03 04:31:52,505 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1304651/.job.ad'
[2026-02-03 05:44:27] 2026-02-03 04:31:52,505 | INFO     | total number of processed events: 400 (read)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,517 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6991964969/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,517 | INFO     | extracted standard info from prmon json
[2026-02-03 05:44:27] 2026-02-03 04:31:52,518 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 05:44:27] 2026-02-03 04:31:52,518 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 05:44:27] 2026-02-03 04:31:52,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 05:44:27] 2026-02-03 04:31:52,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 05:44:27] 2026-02-03 04:31:52,521 | INFO     | fitting pss+swap vs Time
[2026-02-03 05:44:27] 2026-02-03 04:31:52,521 | INFO     | sum of square deviations: 1067554900.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,522 | INFO     | sum of deviations: 1133812490.0000038
[2026-02-03 05:44:27] 2026-02-03 04:31:52,522 | INFO     | mean x: 1770088505.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,522 | INFO     | mean y: 2309248.2317880793
[2026-02-03 05:44:27] 2026-02-03 04:31:52,523 | INFO     | intersect: -1877639460.1432416
[2026-02-03 05:44:27] 2026-02-03 04:31:52,523 | INFO     | chi2: 2.1272162091293696
[2026-02-03 05:44:27] 2026-02-03 04:31:52,523 | INFO     | sum of square deviations: 964976232.5
[2026-02-03 05:44:27] 2026-02-03 04:31:52,524 | INFO     | sum of deviations: 10280012983.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,524 | INFO     | mean x: 1770088352.5
[2026-02-03 05:44:27] 2026-02-03 04:31:52,524 | INFO     | mean y: 2322465.9452054794
[2026-02-03 05:44:27] 2026-02-03 04:31:52,524 | INFO     | intersect: -18854651034.44314
[2026-02-03 05:44:27] 2026-02-03 04:31:52,525 | INFO     | chi2: 1.3239972740726007
[2026-02-03 05:44:27] 2026-02-03 04:31:52,525 | INFO     | current chi2=1.3239972740726007 (change=37.759158265605336 %)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,525 | INFO     | sum of square deviations: 869188390.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,526 | INFO     | sum of deviations: 9843280128.000002
[2026-02-03 05:44:27] 2026-02-03 04:31:52,526 | INFO     | mean x: 1770088200.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,526 | INFO     | mean y: 2321772.631205674
[2026-02-03 05:44:27] 2026-02-03 04:31:52,526 | INFO     | intersect: -20043360158.149406
[2026-02-03 05:44:27] 2026-02-03 04:31:52,526 | INFO     | chi2: 1.3253854560625413
[2026-02-03 05:44:27] 2026-02-03 04:31:52,526 | INFO     | current chi2=1.3253854560625413 (change=-0.10484779818848008 %)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,526 | INFO     | right removable region: 140
[2026-02-03 05:44:27] 2026-02-03 04:31:52,527 | INFO     | sum of square deviations: 964976232.5
[2026-02-03 05:44:27] 2026-02-03 04:31:52,527 | INFO     | sum of deviations: -15882492438.5
[2026-02-03 05:44:27] 2026-02-03 04:31:52,527 | INFO     | mean x: 1770088657.5
[2026-02-03 05:44:27] 2026-02-03 04:31:52,528 | INFO     | mean y: 2334040.390410959
[2026-02-03 05:44:27] 2026-02-03 04:31:52,528 | INFO     | intersect: 29136129020.380623
[2026-02-03 05:44:27] 2026-02-03 04:31:52,528 | INFO     | chi2: 0.8789924693375085
[2026-02-03 05:44:27] 2026-02-03 04:31:52,528 | INFO     | current chi2=0.8789924693375085 (change=58.67874334704961 %)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,528 | INFO     | sum of square deviations: 869188390.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,531 | INFO     | sum of deviations: -12305618084.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,531 | INFO     | mean x: 1770088810.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,531 | INFO     | mean y: 2328337.0921985814
[2026-02-03 05:44:27] 2026-02-03 04:31:52,531 | INFO     | intersect: 25062530614.554787
[2026-02-03 05:44:27] 2026-02-03 04:31:52,531 | INFO     | chi2: 0.8664315154457003
[2026-02-03 05:44:27] 2026-02-03 04:31:52,532 | INFO     | current chi2=0.8664315154457003 (change=1.4290172362085585 %)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,532 | INFO     | left removable region: 20
[2026-02-03 05:44:27] 2026-02-03 04:31:52,532 | INFO     | sum of square deviations: 535786790.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,532 | INFO     | sum of deviations: 638721850.0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,533 | INFO     | mean x: 1770088779.5
[2026-02-03 05:44:27] 2026-02-03 04:31:52,533 | INFO     | mean y: 2335344.6666666665
[2026-02-03 05:44:27] 2026-02-03 04:31:52,533 | INFO     | intersect: -2107821906.3295403
[2026-02-03 05:44:27] 2026-02-03 04:31:52,533 | INFO     | chi2: 0.0007032531769043354
[2026-02-03 05:44:27] 2026-02-03 04:31:52,533 | INFO     | current memory leak: 1.19 B/s (using 120 data points, chi2=0.00)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | could have reported an average CPU frequency of 2651 MHz (9 samples)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | ..............................
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | . Timing measurements:
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | . get job = 0 s
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | . initial setup = 6 s
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | . payload setup = 6 s
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | . stage-in = 0 s
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | . payload execution = 9182 s
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | . stage-out = 0 s
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | . log creation = 0 s
[2026-02-03 05:44:27] 2026-02-03 04:31:52,534 | INFO     | ..............................
[2026-02-03 05:44:27] 2026-02-03 04:31:52,723 | INFO     | 
[2026-02-03 05:44:27] 2026-02-03 04:31:52,723 | INFO     | job summary report
[2026-02-03 05:44:27] 2026-02-03 04:31:52,723 | INFO     | --------------------------------------------------
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | PanDA job id: 6991964969
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | task id: 48310749
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | errors: (none)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | pilot state: finished 
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | transexitcode: 0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | exeerrorcode: 0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | exeerrordiag: 
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | exitcode: 0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | exitmsg: OK
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | cpuconsumptiontime: 35463 s
[2026-02-03 05:44:27] 2026-02-03 04:31:52,724 | INFO     | nevents: 400
[2026-02-03 05:44:27] 2026-02-03 04:31:52,725 | INFO     | neventsw: 0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,725 | INFO     | pid: 237611
[2026-02-03 05:44:27] 2026-02-03 04:31:52,725 | INFO     | pgrp: 237611
[2026-02-03 05:44:27] 2026-02-03 04:31:52,725 | INFO     | corecount: 4
[2026-02-03 05:44:27] 2026-02-03 04:31:52,725 | INFO     | event service: False
[2026-02-03 05:44:27] 2026-02-03 04:31:52,725 | INFO     | sizes: {0: 2278028, 1: 2278234, 11: 2278262, 9192: 2306613, 9193: 2306612, 9194: 2316074}
[2026-02-03 05:44:27] 2026-02-03 04:31:52,725 | INFO     | --------------------------------------------------
[2026-02-03 05:44:27] 2026-02-03 04:31:52,725 | INFO     | 
[2026-02-03 05:44:27] 2026-02-03 04:31:52,725 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-02-03 05:44:27] 2026-02-03 04:31:52,747 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,748 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,748 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,750 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,750 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 05:44:27] 2026-02-03 04:31:52,750 | INFO     | job 6991964969 has completed (purged errors)
[2026-02-03 05:44:27] 2026-02-03 04:31:52,750 | INFO     | overall cleanup function is called
[2026-02-03 05:44:27] 2026-02-03 04:31:53,758 | INFO     | --- collectZombieJob: --- 10, [237611]
[2026-02-03 05:44:27] 2026-02-03 04:31:53,758 | INFO     | zombie collector waiting for pid 237611
[2026-02-03 05:44:27] 2026-02-03 04:31:53,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 05:44:27] 2026-02-03 04:31:53,758 | INFO     | collected zombie processes
[2026-02-03 05:44:27] 2026-02-03 04:31:53,758 | INFO     | will attempt to kill all subprocesses of pid=237611
[2026-02-03 05:44:27] 2026-02-03 04:31:54,151 | INFO     | process IDs to be killed: [237611] (in reverse order)
[2026-02-03 05:44:27] 2026-02-03 04:31:54,266 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 05:44:27] 2026-02-03 04:31:54,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 05:44:27] 2026-02-03 04:31:54,282 | INFO     | did not find any defunct processes belonging to 237611
[2026-02-03 05:44:27] 2026-02-03 04:31:54,297 | INFO     | did not find any defunct processes belonging to 237611
[2026-02-03 05:44:27] 2026-02-03 04:31:54,297 | INFO     | ready for new job
[2026-02-03 05:44:27] 2026-02-03 04:31:54,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 05:44:27] 2026-02-03 04:31:54,300 | INFO     | **************************************
[2026-02-03 05:44:27] 2026-02-03 04:31:54,301 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 05:44:27] 2026-02-03 04:31:54,301 | INFO     | **************************************
[2026-02-03 05:44:27] 2026-02-03 04:31:54,302 | INFO     | 
[2026-02-03 05:44:27] 2026-02-03 04:31:54,305 | INFO     | architecture information:
[2026-02-03 05:44:27] 2026-02-03 04:31:54,306 | INFO     | executing command: cat /etc/os-release
[2026-02-03 05:44:27] 2026-02-03 04:31:54,323 | INFO     | cat /etc/os-release:
[2026-02-03 05:44:27] NAME="CentOS Linux"
[2026-02-03 05:44:27] VERSION="7 (Core)"
[2026-02-03 05:44:27] ID="centos"
[2026-02-03 05:44:27] ID_LIKE="rhel fedora"
[2026-02-03 05:44:27] VERSION_ID="7"
[2026-02-03 05:44:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 05:44:27] ANSI_COLOR="0;31"
[2026-02-03 05:44:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 05:44:27] HOME_URL="https://www.centos.org/"
[2026-02-03 05:44:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 05:44:27] 
[2026-02-03 05:44:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 05:44:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 05:44:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 05:44:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 05:44:27] 
[2026-02-03 05:44:27] 2026-02-03 04:31:54,324 | INFO     | **************************************
[2026-02-03 05:44:27] 2026-02-03 04:31:54,827 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-02-03 05:44:27] 2026-02-03 04:31:54,844 | INFO     | sufficient remaining disk space (654490730496 B)
[2026-02-03 05:44:27] 2026-02-03 04:31:54,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 05:44:27] 2026-02-03 04:31:54,844 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 05:44:27] 2026-02-03 04:31:54,844 | INFO     | update_server=False
[2026-02-03 05:44:27] 2026-02-03 04:31:54,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 05:44:27] 2026-02-03 04:31:54,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 05:44:27] 2026-02-03 04:31:54,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 05:44:27] 2026-02-03 04:31:54,845 | INFO     | aborting loop
[2026-02-03 05:44:27] 2026-02-03 04:31:54,917 | INFO     | all payload control threads have been joined
[2026-02-03 05:44:27] 2026-02-03 04:31:55,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 05:44:27] 2026-02-03 04:31:55,420 | INFO     | all data control threads have been joined
[2026-02-03 05:44:27] 2026-02-03 04:31:55,585 | INFO     | all job control threads have been joined
[2026-02-03 05:44:27] 2026-02-03 04:31:55,847 | INFO     | [job] retrieve thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:55,847 | INFO     | [job] job monitor thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:55,921 | INFO     | [payload] control thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:55,954 | INFO     | [data] copytool_in thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:56,080 | INFO     | [payload] failed_post thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:56,426 | INFO     | [data] control thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:56,590 | INFO     | [job] control thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:56,742 | INFO     | [job] validate thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:56,873 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:56,910 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:57,038 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:57,233 | INFO     | [payload] validate_post thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:57,266 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:57,420 | INFO     | [data] copytool_out thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:57,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 05:44:27] 2026-02-03 04:31:58,636 | INFO     | [job] queue monitor thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:31:58,851 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 05:44:27] 2026-02-03 04:32:25,009 | INFO     | PID=232506 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 05:44:27] 2026-02-03 04:32:25,009 | INFO     | .. there are 4 such processes running
[2026-02-03 05:44:27] 2026-02-03 04:32:25,009 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 05:44:27] 2026-02-03 04:32:25,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 05:44:27] 2026-02-03 04:32:25,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 05:44:27] 2026-02-03 04:32:41,671 | INFO     | [monitor] cgroup control has ended
[2026-02-03 05:44:27] 2026-02-03 04:32:41,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23368660506432)>', '<ExcThread(monitor, started 23368421353216)>']
[2026-02-03 05:44:27] 2026-02-03 04:32:42,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 05:44:27] 2026-02-03 04:32:42,090 | INFO     | [monitor] control thread has ended
[2026-02-03 05:44:27] 2026-02-03 04:32:46,822 | INFO     | all workflow threads have been joined
[2026-02-03 05:44:27] 2026-02-03 04:32:46,822 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 05:44:27] 2026-02-03 04:32:46,822 | INFO     | traces error code: 0
[2026-02-03 05:44:27] 2026-02-03 04:32:46,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 05:44:27] 2026-02-03 04:32:46,995 [wrapper] ==== pilot stdout END ====
[2026-02-03 05:44:27] 2026-02-03 04:32:46,997 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 05:44:27] 2026-02-03 04:32:47,000 [wrapper] pilotpid: 232506
[2026-02-03 05:44:27] 2026-02-03 04:32:47,002 [wrapper] Pilot exit status: 0
[2026-02-03 05:44:27] 2026-02-03 04:32:47,012 [wrapper] pandaids: 6991964969
[2026-02-03 05:44:27] 2026-02-03 04:32:47,086 [wrapper] cleanup supervisor_pilot  313962 232507
[2026-02-03 05:44:27] 2026-02-03 04:32:47,089 [wrapper] Test setup, not cleaning
[2026-02-03 05:44:27] 2026-02-03 04:32:47,092 [wrapper] apfmon messages muted
[2026-02-03 05:44:27] 2026-02-03 04:32:47,094 [wrapper] ==== wrapper stdout END ====
[2026-02-03 05:44:27] 2026-02-03 04:32:47,097 [wrapper] ==== wrapper stderr END ====
[2026-02-03 05:44:27]  *** Error codes and diagnostics ***
[2026-02-03 05:44:27]     "exeErrorCode": 0,
[2026-02-03 05:44:27]     "exeErrorDiag": "",
[2026-02-03 05:44:27]     "pilotErrorCode": 0,
[2026-02-03 05:44:27]     "pilotErrorDiag": "",
[2026-02-03 05:44:27]  *** Listing of results directory ***
[2026-02-03 05:44:27] total 658516
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc    584422 Feb  1 13:55 pilot3.tar.gz
[2026-02-03 05:44:27] -rwx------ 1 boinc boinc     36322 Feb  1 13:56 runpilot2-wrapper.sh
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc      5111 Feb  1 13:57 queuedata.json
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc       100 Feb  3 02:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 05:44:27] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 02:58 run_atlas
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc       105 Feb  3 02:58 job.xml
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc      6639 Feb  3 02:58 init_data.xml
[2026-02-03 05:44:27] -rw-r--r-- 2 boinc boinc 489782441 Feb  3 02:58 EVNT.48310747._000054.pool.root.1
[2026-02-03 05:44:27] -rw-r--r-- 2 boinc boinc     15845 Feb  3 02:58 start_atlas.sh
[2026-02-03 05:44:27] drwxrwx--x 2 boinc boinc      4096 Feb  3 02:58 shared
[2026-02-03 05:44:27] -rw-r--r-- 2 boinc boinc    597761 Feb  3 02:58 input.tar.gz
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc         0 Feb  3 02:58 boinc_lockfile
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc      2523 Feb  3 02:58 pandaJob.out
[2026-02-03 05:44:27] -rw------- 1 boinc boinc   1009308 Feb  3 02:58 agis_schedconf.cvmfs.json
[2026-02-03 05:44:27] -rw------- 1 boinc boinc   1511668 Feb  3 02:58 agis_ddmendpoints.agis.ALL.json
[2026-02-03 05:44:27] -rw------- 1 boinc boinc       448 Feb  3 02:58 workernode_map.json
[2026-02-03 05:44:27] drwx------ 5 boinc boinc      4096 Feb  3 02:58 pilot3
[2026-02-03 05:44:27] -rw------- 1 boinc boinc 177249917 Feb  3 05:31 HITS.48310749._002684.pool.root.1
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc       529 Feb  3 05:31 boinc_task_state.xml
[2026-02-03 05:44:27] -rw------- 1 boinc boinc      1034 Feb  3 05:31 memory_monitor_summary.json
[2026-02-03 05:44:27] -rw------- 1 boinc boinc    360111 Feb  3 05:31 log.48310749._002684.job.log.tgz.1
[2026-02-03 05:44:27] -rw------- 1 boinc boinc        95 Feb  3 05:31 pilot_heartbeat.json
[2026-02-03 05:44:27] -rw------- 1 boinc boinc      6399 Feb  3 05:31 heartbeat.json
[2026-02-03 05:44:27] -rw------- 1 boinc boinc      4828 Feb  3 05:32 pilotlog.txt
[2026-02-03 05:44:27] -rw------- 1 boinc boinc   1316679 Feb  3 05:32 log.48310749._002684.job.log.1
[2026-02-03 05:44:27] -rw------- 1 boinc boinc       357 Feb  3 05:32 output.list
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc       620 Feb  3 05:32 runtime_log
[2026-02-03 05:44:27] -rw------- 1 boinc boinc   1689600 Feb  3 05:32 result.tar.gz
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc      9204 Feb  3 05:32 runtime_log.err
[2026-02-03 05:44:27] -rw------- 1 boinc boinc       662 Feb  3 05:32 15lLDmRBm68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0IQKDmztYX6n.diag
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc        27 Feb  3 05:44 wrapper_checkpoint.txt
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc      8192 Feb  3 05:44 boinc_mmap_file
[2026-02-03 05:44:27] -rw-r--r-- 1 boinc boinc     20858 Feb  3 05:44 stderr.txt
[2026-02-03 05:44:27] HITS file was successfully produced:
[2026-02-03 05:44:27] -rw------- 1 boinc boinc 177249917 Feb  3 05:31 shared/HITS.pool.root.1
[2026-02-03 05:44:27]  *** Contents of shared directory: ***
[2026-02-03 05:44:27] total 653660
[2026-02-03 05:44:27] -rw-r--r-- 2 boinc boinc 489782441 Feb  3 02:58 ATLAS.root_0
[2026-02-03 05:44:27] -rw-r--r-- 2 boinc boinc     15845 Feb  3 02:58 start_atlas.sh
[2026-02-03 05:44:27] -rw-r--r-- 2 boinc boinc    597761 Feb  3 02:58 input.tar.gz
[2026-02-03 05:44:27] -rw------- 1 boinc boinc 177249917 Feb  3 05:31 HITS.pool.root.1
[2026-02-03 05:44:27] -rw------- 1 boinc boinc   1689600 Feb  3 05:32 result.tar.gz
05:44:29 (228666): run_atlas exited; CPU time 35882.306034
05:44:29 (228666): called boinc_finish(0)

</stderr_txt>
]]>

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