Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:47:15 (5633): wrapper (7.7.26015): starting
22:47:15 (5633): wrapper: running run_atlas (--nthreads 8)
[2026-02-01 22:47:15] Arguments: --nthreads 8
[2026-02-01 22:47:15] Threads: 8
[2026-02-01 22:47:15] Checking for CVMFS
[2026-02-01 22:47:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 22:47:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 22:47:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 22:47:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 22:47:16] 2.11.2.0 6904 69095 131736 155763 3 88 19214474 25165825 818 130560 0 25877701 99.835 17109954 3070 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-01 22:47:16] CVMFS is ok
[2026-02-01 22:47:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 22:47:16] Checking for apptainer binary...
[2026-02-01 22:47:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 22:47:16] Running /usr/bin/apptainer --version
[2026-02-01 22:47:16] apptainer version 1.3.2-1.el7
[2026-02-01 22:47:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 22:47:18] cg-vwn474.simple-grid.lan
[2026-02-01 22:47:18] apptainer works
[2026-02-01 22:47:18] Set ATHENA_PROC_NUMBER=8
[2026-02-01 22:47:18] Set ATHENA_CORE_NUMBER=8
[2026-02-01 22:47:18] Starting ATLAS job with PandaID=6991965017
[2026-02-01 22:47:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 01:09:10]  *** The last 200 lines of the pilot log: ***
[2026-02-02 01:09:10] 2026-02-02 00:08:37,626 | INFO     | preparing for final server update for job 6991965017 in state='finished'
[2026-02-02 01:09:10] 2026-02-02 00:08:37,626 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-6991965017/jobReport.json
[2026-02-02 01:09:10] 2026-02-02 00:08:37,629 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-02-02 01:09:10] 2026-02-02 00:08:37,629 | INFO     | this job has now completed (state=finished)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,629 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,630 | INFO     | log transfer has been attempted: DONE
[2026-02-02 01:09:10] 2026-02-02 00:08:37,630 | INFO     | job 6991965017 has finished - writing final server update
[2026-02-02 01:09:10] 2026-02-02 00:08:37,630 | INFO     | total number of processed events: 400 (read)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,632 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6991965017/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,633 | INFO     | extracted standard info from prmon json
[2026-02-02 01:09:10] 2026-02-02 00:08:37,633 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 01:09:10] 2026-02-02 00:08:37,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 01:09:10] 2026-02-02 00:08:37,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 01:09:10] 2026-02-02 00:08:37,634 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 01:09:10] 2026-02-02 00:08:37,637 | INFO     | fitting pss+swap vs Time
[2026-02-02 01:09:10] 2026-02-02 00:08:37,637 | INFO     | sum of square deviations: 814878534.5
[2026-02-02 01:09:10] 2026-02-02 00:08:37,638 | INFO     | sum of deviations: 4550612779.500002
[2026-02-02 01:09:10] 2026-02-02 00:08:37,639 | INFO     | mean x: 1769986675.5
[2026-02-02 01:09:10] 2026-02-02 00:08:37,639 | INFO     | mean y: 2503241.4855072466
[2026-02-02 01:09:10] 2026-02-02 00:08:37,639 | INFO     | intersect: -9881821408.220947
[2026-02-02 01:09:10] 2026-02-02 00:08:37,639 | INFO     | chi2: 1.6448831495001919
[2026-02-02 01:09:10] 2026-02-02 00:08:37,639 | INFO     | sum of square deviations: 729472282.0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,640 | INFO     | sum of deviations: 4375522923.999997
[2026-02-02 01:09:10] 2026-02-02 00:08:37,641 | INFO     | mean x: 1769986523.0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,641 | INFO     | mean y: 2502928.834586466
[2026-02-02 01:09:10] 2026-02-02 00:08:37,641 | INFO     | intersect: -10614235770.714176
[2026-02-02 01:09:10] 2026-02-02 00:08:37,641 | INFO     | chi2: 1.6460750214222022
[2026-02-02 01:09:10] 2026-02-02 00:08:37,641 | INFO     | current chi2=1.6460750214222022 (change=-0.07245936724274124 %)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,641 | INFO     | right removable region: 132
[2026-02-02 01:09:10] 2026-02-02 00:08:37,642 | INFO     | sum of square deviations: 729472282.0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,643 | INFO     | sum of deviations: -16329542376.000004
[2026-02-02 01:09:10] 2026-02-02 00:08:37,643 | INFO     | mean x: 1769986828.0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,643 | INFO     | mean y: 2539893.3684210526
[2026-02-02 01:09:10] 2026-02-02 00:08:37,643 | INFO     | intersect: 39624435921.47252
[2026-02-02 01:09:10] 2026-02-02 00:08:37,643 | INFO     | chi2: 0.13324787680647673
[2026-02-02 01:09:10] 2026-02-02 00:08:37,644 | INFO     | current chi2=0.13324787680647673 (change=91.89924969156837 %)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,644 | INFO     | sum of square deviations: 650252192.0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,645 | INFO     | sum of deviations: -13814440762.0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,645 | INFO     | mean x: 1769986980.5
[2026-02-02 01:09:10] 2026-02-02 00:08:37,645 | INFO     | mean y: 2534965.53125
[2026-02-02 01:09:10] 2026-02-02 00:08:37,645 | INFO     | intersect: 37605453636.85885
[2026-02-02 01:09:10] 2026-02-02 00:08:37,646 | INFO     | chi2: 0.12058902464291697
[2026-02-02 01:09:10] 2026-02-02 00:08:37,646 | INFO     | current chi2=0.12058902464291697 (change=9.500228046368733 %)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,646 | INFO     | left removable region: 20
[2026-02-02 01:09:10] 2026-02-02 00:08:37,646 | INFO     | sum of square deviations: 435610028.0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,647 | INFO     | sum of deviations: -4330071458.0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,647 | INFO     | mean x: 1769987102.5
[2026-02-02 01:09:10] 2026-02-02 00:08:37,647 | INFO     | mean y: 2514646.1071428573
[2026-02-02 01:09:10] 2026-02-02 00:08:37,647 | INFO     | intersect: 17596624379.419735
[2026-02-02 01:09:10] 2026-02-02 00:08:37,648 | INFO     | chi2: 0.0653962348160262
[2026-02-02 01:09:10] 2026-02-02 00:08:37,648 | INFO     | current memory leak: -9.94 B/s (using 112 data points, chi2=0.07)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,648 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,649 | INFO     | ..............................
[2026-02-02 01:09:10] 2026-02-02 00:08:37,649 | INFO     | . Timing measurements:
[2026-02-02 01:09:10] 2026-02-02 00:08:37,649 | INFO     | . get job = 0 s
[2026-02-02 01:09:10] 2026-02-02 00:08:37,649 | INFO     | . initial setup = 8 s
[2026-02-02 01:09:10] 2026-02-02 00:08:37,649 | INFO     | . payload setup = 9 s
[2026-02-02 01:09:10] 2026-02-02 00:08:37,649 | INFO     | . stage-in = 0 s
[2026-02-02 01:09:10] 2026-02-02 00:08:37,649 | INFO     | . payload execution = 8423 s
[2026-02-02 01:09:10] 2026-02-02 00:08:37,649 | INFO     | . stage-out = 0 s
[2026-02-02 01:09:10] 2026-02-02 00:08:37,649 | INFO     | . log creation = 0 s
[2026-02-02 01:09:10] 2026-02-02 00:08:37,650 | INFO     | ..............................
[2026-02-02 01:09:10] 2026-02-02 00:08:37,848 | INFO     | 
[2026-02-02 01:09:10] 2026-02-02 00:08:37,848 | INFO     | job summary report
[2026-02-02 01:09:10] 2026-02-02 00:08:37,848 | INFO     | --------------------------------------------------
[2026-02-02 01:09:10] 2026-02-02 00:08:37,848 | INFO     | PanDA job id: 6991965017
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | task id: 48310749
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | errors: (none)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | pilot state: finished 
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | transexitcode: 0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | exeerrorcode: 0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | exeerrordiag: 
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | exitcode: 0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | exitmsg: OK
[2026-02-02 01:09:10] 2026-02-02 00:08:37,849 | INFO     | cpuconsumptiontime: 47856 s
[2026-02-02 01:09:10] 2026-02-02 00:08:37,850 | INFO     | nevents: 400
[2026-02-02 01:09:10] 2026-02-02 00:08:37,850 | INFO     | neventsw: 0
[2026-02-02 01:09:10] 2026-02-02 00:08:37,850 | INFO     | pid: 14124
[2026-02-02 01:09:10] 2026-02-02 00:08:37,850 | INFO     | pgrp: 14124
[2026-02-02 01:09:10] 2026-02-02 00:08:37,850 | INFO     | corecount: 8
[2026-02-02 01:09:10] 2026-02-02 00:08:37,850 | INFO     | event service: False
[2026-02-02 01:09:10] 2026-02-02 00:08:37,850 | INFO     | sizes: {0: 2277734, 1: 2278251, 12: 2278251, 8437: 2306104, 8439: 2315158, 8440: 2315296}
[2026-02-02 01:09:10] 2026-02-02 00:08:37,850 | INFO     | --------------------------------------------------
[2026-02-02 01:09:10] 2026-02-02 00:08:37,850 | INFO     | 
[2026-02-02 01:09:10] 2026-02-02 00:08:37,851 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-02 01:09:10] 2026-02-02 00:08:37,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,901 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 01:09:10] 2026-02-02 00:08:37,904 | INFO     | job 6991965017 has completed (purged errors)
[2026-02-02 01:09:10] 2026-02-02 00:08:37,904 | INFO     | overall cleanup function is called
[2026-02-02 01:09:10] 2026-02-02 00:08:38,913 | INFO     | --- collectZombieJob: --- 10, [14124]
[2026-02-02 01:09:10] 2026-02-02 00:08:38,913 | INFO     | zombie collector waiting for pid 14124
[2026-02-02 01:09:10] 2026-02-02 00:08:38,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 01:09:10] 2026-02-02 00:08:38,914 | INFO     | collected zombie processes
[2026-02-02 01:09:10] 2026-02-02 00:08:38,914 | INFO     | will attempt to kill all subprocesses of pid=14124
[2026-02-02 01:09:10] 2026-02-02 00:08:38,995 | INFO     | process IDs to be killed: [14124] (in reverse order)
[2026-02-02 01:09:10] 2026-02-02 00:08:39,060 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 01:09:10] 2026-02-02 00:08:39,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 01:09:10] 2026-02-02 00:08:39,063 | INFO     | did not find any defunct processes belonging to 14124
[2026-02-02 01:09:10] 2026-02-02 00:08:39,065 | INFO     | did not find any defunct processes belonging to 14124
[2026-02-02 01:09:10] 2026-02-02 00:08:39,065 | INFO     | ready for new job
[2026-02-02 01:09:10] 2026-02-02 00:08:39,065 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 01:09:10] 2026-02-02 00:08:39,067 | INFO     | **************************************
[2026-02-02 01:09:10] 2026-02-02 00:08:39,067 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 01:09:10] 2026-02-02 00:08:39,067 | INFO     | **************************************
[2026-02-02 01:09:10] 2026-02-02 00:08:39,067 | INFO     | 
[2026-02-02 01:09:10] 2026-02-02 00:08:39,068 | INFO     | pilot is running in a VM
[2026-02-02 01:09:10] 2026-02-02 00:08:39,068 | INFO     | architecture information:
[2026-02-02 01:09:10] 2026-02-02 00:08:39,069 | INFO     | executing command: cat /etc/os-release
[2026-02-02 01:09:10] 2026-02-02 00:08:39,090 | INFO     | cat /etc/os-release:
[2026-02-02 01:09:10] NAME="CentOS Linux"
[2026-02-02 01:09:10] VERSION="7 (Core)"
[2026-02-02 01:09:10] ID="centos"
[2026-02-02 01:09:10] ID_LIKE="rhel fedora"
[2026-02-02 01:09:10] VERSION_ID="7"
[2026-02-02 01:09:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 01:09:10] ANSI_COLOR="0;31"
[2026-02-02 01:09:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 01:09:10] HOME_URL="https://www.centos.org/"
[2026-02-02 01:09:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 01:09:10] 
[2026-02-02 01:09:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 01:09:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 01:09:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 01:09:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 01:09:10] 
[2026-02-02 01:09:10] 2026-02-02 00:08:39,091 | INFO     | **************************************
[2026-02-02 01:09:10] 2026-02-02 00:08:39,592 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-02 01:09:10] 2026-02-02 00:08:39,617 | INFO     | sufficient remaining disk space (496770220032 B)
[2026-02-02 01:09:10] 2026-02-02 00:08:39,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 01:09:10] 2026-02-02 00:08:39,618 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 01:09:10] 2026-02-02 00:08:39,618 | INFO     | update_server=False
[2026-02-02 01:09:10] 2026-02-02 00:08:39,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 01:09:10] 2026-02-02 00:08:39,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 01:09:10] 2026-02-02 00:08:39,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 01:09:10] 2026-02-02 00:08:39,677 | INFO     | all data control threads have been joined
[2026-02-02 01:09:10] 2026-02-02 00:08:39,690 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 01:09:10] 2026-02-02 00:08:39,690 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 01:09:10] 2026-02-02 00:08:39,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 01:09:10] 2026-02-02 00:08:39,691 | INFO     | will abort loop
[2026-02-02 01:09:10] 2026-02-02 00:08:40,319 | INFO     | all job control threads have been joined
[2026-02-02 01:09:10] 2026-02-02 00:08:40,625 | INFO     | [job] retrieve thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:40,625 | INFO     | [job] queue monitor thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:40,682 | INFO     | [data] control thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:40,697 | INFO     | [job] job monitor thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:40,774 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:40,971 | INFO     | all payload control threads have been joined
[2026-02-02 01:09:10] 2026-02-02 00:08:41,325 | INFO     | [job] control thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:41,378 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:41,472 | INFO     | [data] copytool_in thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:41,485 | INFO     | [job] validate thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:41,487 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:41,623 | INFO     | [data] copytool_out thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:41,678 | INFO     | [payload] failed_post thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:41,880 | INFO     | [payload] validate_post thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:41,977 | INFO     | [payload] control thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:41,982 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:42,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 01:09:10] 2026-02-02 00:08:46,713 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 01:09:10] 2026-02-02 00:08:59,601 | INFO     | [monitor] cgroup control has ended
[2026-02-02 01:09:10] 2026-02-02 00:09:01,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137452754752)>', '<ExcThread(monitor, started 140136763340544)>']
[2026-02-02 01:09:10] 2026-02-02 00:09:06,516 | INFO     | all workflow threads have been joined
[2026-02-02 01:09:10] 2026-02-02 00:09:06,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 01:09:10] 2026-02-02 00:09:06,517 | INFO     | traces error code: 0
[2026-02-02 01:09:10] 2026-02-02 00:09:06,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 01:09:10] 2026-02-02 00:09:10,103 | INFO     | PID=9687 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-02 01:09:10] 2026-02-02 00:09:10,103 | INFO     | .. there are 5 such processes running
[2026-02-02 01:09:10] 2026-02-02 00:09:10,104 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 01:09:10] 2026-02-02 00:09:10,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 01:09:10] 2026-02-02 00:09:10,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 01:09:10] 2026-02-02 00:09:10,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 01:09:10] 2026-02-02 00:09:10,104 | INFO     | [monitor] control thread has ended
[2026-02-02 01:09:10] 2026-02-02 00:09:10,246 [wrapper] ==== pilot stdout END ====
[2026-02-02 01:09:10] 2026-02-02 00:09:10,250 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 01:09:10] 2026-02-02 00:09:10,253 [wrapper] pilotpid: 9687
[2026-02-02 01:09:10] 2026-02-02 00:09:10,259 [wrapper] Pilot exit status: 0
[2026-02-02 01:09:10] 2026-02-02 00:09:10,287 [wrapper] pandaids: 6991965017
[2026-02-02 01:09:10] 2026-02-02 00:09:10,367 [wrapper] cleanup supervisor_pilot 19008 9688
[2026-02-02 01:09:10] 2026-02-02 00:09:10,375 [wrapper] Test setup, not cleaning
[2026-02-02 01:09:10] 2026-02-02 00:09:10,382 [wrapper] apfmon messages muted
[2026-02-02 01:09:10] 2026-02-02 00:09:10,389 [wrapper] ==== wrapper stdout END ====
[2026-02-02 01:09:10] 2026-02-02 00:09:10,400 [wrapper] ==== wrapper stderr END ====
[2026-02-02 01:09:10]  *** Error codes and diagnostics ***
[2026-02-02 01:09:10]     "exeErrorCode": 0,
[2026-02-02 01:09:10]     "exeErrorDiag": "",
[2026-02-02 01:09:10]     "pilotErrorCode": 0,
[2026-02-02 01:09:10]     "pilotErrorDiag": "",
[2026-02-02 01:09:10]  *** Listing of results directory ***
[2026-02-02 01:09:10] total 668652
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc      5111 Feb  1 13:55 queuedata.json
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc    584422 Feb  1 13:55 pilot3.tar.gz
[2026-02-02 01:09:10] -rwx------. 1 boinc boinc     36322 Feb  1 13:55 runpilot2-wrapper.sh
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc       100 Feb  1 22:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 01:09:10] -rwxr-xr-x. 1 boinc boinc      7986 Feb  1 22:47 run_atlas
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc       105 Feb  1 22:47 job.xml
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc      6392 Feb  1 22:47 init_data.xml
[2026-02-02 01:09:10] -rw-r--r--. 2 boinc boinc 495643576 Feb  1 22:47 EVNT.48310747._000055.pool.root.1
[2026-02-02 01:09:10] -rw-r--r--. 2 boinc boinc     15845 Feb  1 22:47 start_atlas.sh
[2026-02-02 01:09:10] drwxrwx--x. 2 boinc boinc        68 Feb  1 22:47 shared
[2026-02-02 01:09:10] -rw-r--r--. 2 boinc boinc    597759 Feb  1 22:47 input.tar.gz
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc         0 Feb  1 22:47 boinc_lockfile
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc      2523 Feb  1 22:47 pandaJob.out
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc   1009765 Feb  1 22:47 agis_schedconf.cvmfs.json
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc   1511668 Feb  1 22:47 agis_ddmendpoints.agis.ALL.json
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc       415 Feb  1 22:47 workernode_map.json
[2026-02-02 01:09:10] drwx------. 5 boinc boinc      4096 Feb  1 22:47 pilot3
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc       530 Feb  2 01:07 boinc_task_state.xml
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc 181907575 Feb  2 01:07 HITS.48310749._002732.pool.root.1
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc      1013 Feb  2 01:08 memory_monitor_summary.json
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc    403201 Feb  2 01:08 log.48310749._002732.job.log.tgz.1
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc      6305 Feb  2 01:08 heartbeat.json
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc      8192 Feb  2 01:08 boinc_mmap_file
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc        27 Feb  2 01:08 wrapper_checkpoint.txt
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc        95 Feb  2 01:09 pilot_heartbeat.json
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc       819 Feb  2 01:09 pilotlog.txt
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc   1211072 Feb  2 01:09 log.48310749._002732.job.log.1
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc       357 Feb  2 01:09 output.list
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc       620 Feb  2 01:09 runtime_log
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc   1628160 Feb  2 01:09 result.tar.gz
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc       652 Feb  2 01:09 tcEMDmIAm68n9Rq4apOajLDm4fhM0noT9bVooX4SDmVsPKDm13Od8n.diag
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc      8815 Feb  2 01:09 runtime_log.err
[2026-02-02 01:09:10] -rw-r--r--. 1 boinc boinc     20891 Feb  2 01:09 stderr.txt
[2026-02-02 01:09:10] HITS file was successfully produced:
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc 181907575 Feb  2 01:07 shared/HITS.pool.root.1
[2026-02-02 01:09:10]  *** Contents of shared directory: ***
[2026-02-02 01:09:10] total 663868
[2026-02-02 01:09:10] -rw-r--r--. 2 boinc boinc 495643576 Feb  1 22:47 ATLAS.root_0
[2026-02-02 01:09:10] -rw-r--r--. 2 boinc boinc     15845 Feb  1 22:47 start_atlas.sh
[2026-02-02 01:09:10] -rw-r--r--. 2 boinc boinc    597759 Feb  1 22:47 input.tar.gz
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc 181907575 Feb  2 01:07 HITS.pool.root.1
[2026-02-02 01:09:10] -rw-------. 1 boinc boinc   1628160 Feb  2 01:09 result.tar.gz
01:09:12 (5633): run_atlas exited; CPU time 47935.055349
01:09:12 (5633): called boinc_finish(0)

</stderr_txt>
]]>

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