Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:13:49 (1345826): wrapper (7.7.26015): starting
04:13:49 (1345826): wrapper: running run_atlas (--nthreads 3)
[2026-02-03 04:13:49] Arguments: --nthreads 3
[2026-02-03 04:13:49] Threads: 3
[2026-02-03 04:13:49] Checking for CVMFS
[2026-02-03 04:13:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 04:13:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 04:13:50] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 04:13:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 04:13:50] 2.12.7.0 3764 9283 55548 155814 1 50 5514606 6144001 2751 130560 0 13286179 99.994 448786 2203 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2026-02-03 04:13:50] CVMFS is ok
[2026-02-03 04:13:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 04:13:50] Checking for apptainer binary...
[2026-02-03 04:13:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 04:13:50] Running /usr/bin/apptainer --version
[2026-02-03 04:13:50] apptainer version 1.4.5
[2026-02-03 04:13:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 04:13:50] Ryzen8
[2026-02-03 04:13:50] apptainer works
[2026-02-03 04:13:50] Set ATHENA_PROC_NUMBER=3
[2026-02-03 04:13:50] Set ATHENA_CORE_NUMBER=3
[2026-02-03 04:13:50] Starting ATLAS job with PandaID=6995418331
[2026-02-03 04:13:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 06:05:15]  *** The last 200 lines of the pilot log: ***
[2026-02-03 06:05:15] 2026-02-03 05:04:32,091 | INFO     | this job has now completed (state=finished)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,091 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,091 | INFO     | log transfer has been attempted: DONE
[2026-02-03 06:05:15] 2026-02-03 05:04:32,092 | INFO     | job 6995418331 has finished - writing final server update
[2026-02-03 06:05:15] 2026-02-03 05:04:32,092 | INFO     | total number of processed events: 400 (read)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,093 | INFO     | using path: /var/lib/boinc2/slots/1/PanDA_Pilot-6995418331/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,093 | INFO     | extracted standard info from prmon json
[2026-02-03 06:05:15] 2026-02-03 05:04:32,093 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 06:05:15] 2026-02-03 05:04:32,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 06:05:15] 2026-02-03 05:04:32,093 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 06:05:15] 2026-02-03 05:04:32,093 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 06:05:15] 2026-02-03 05:04:32,094 | INFO     | fitting pss+swap vs Time
[2026-02-03 06:05:15] 2026-02-03 05:04:32,095 | INFO     | sum of square deviations: 401533110.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,095 | INFO     | sum of deviations: 809920302.0000002
[2026-02-03 06:05:15] 2026-02-03 05:04:32,095 | INFO     | mean x: 1770091750.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,095 | INFO     | mean y: 2330126.339449541
[2026-02-03 06:05:15] 2026-02-03 05:04:32,095 | INFO     | intersect: -3568068451.0722833
[2026-02-03 06:05:15] 2026-02-03 05:04:32,095 | INFO     | chi2: 1.1508586314478064
[2026-02-03 06:05:15] 2026-02-03 05:04:32,095 | INFO     | sum of square deviations: 348769330.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,095 | INFO     | sum of deviations: 1107967613.500001
[2026-02-03 06:05:15] 2026-02-03 05:04:32,095 | INFO     | mean x: 1770091597.5
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | mean y: 2330989.144230769
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | intersect: -5620881817.321519
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | chi2: 1.1524600376661782
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | current chi2=1.1524600376661782 (change=-0.13914882111603813 %)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | right removable region: 103
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | sum of square deviations: 348769330.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | sum of deviations: -9116840644.000002
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | mean x: 1770091902.5
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | mean y: 2357879.3653846155
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | intersect: 46272612779.15055
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | chi2: 0.020702746557100637
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | current chi2=0.020702746557100637 (change=98.2011042893204 %)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,096 | INFO     | sum of square deviations: 300842850.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | sum of deviations: -8369899914.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | mean x: 1770092055.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | mean y: 2355492.01010101
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | intersect: 49248974911.14066
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | chi2: 0.01962724016978087
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | current chi2=0.01962724016978087 (change=5.19499373840757 %)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | left removable region: 20
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | sum of square deviations: 177275882.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | sum of deviations: -5777510080.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | mean x: 1770092177.0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | mean y: 2350595.518072289
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | intersect: 57690544160.09244
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | chi2: 0.017287232331109872
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | current memory leak: -32.59 B/s (using 83 data points, chi2=0.02)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,097 | INFO     | could have reported an average CPU frequency of 4326 MHz (7 samples)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | ..............................
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | . Timing measurements:
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | . get job = 0 s
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | . initial setup = 2 s
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | . payload setup = 2 s
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | . stage-in = 0 s
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | . payload execution = 6609 s
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | . stage-out = 0 s
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | . log creation = 0 s
[2026-02-03 06:05:15] 2026-02-03 05:04:32,098 | INFO     | ..............................
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | 
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | job summary report
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | --------------------------------------------------
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | PanDA job id: 6995418331
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | task id: 48317931
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | errors: (none)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | pilot state: finished 
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | transexitcode: 0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | exeerrorcode: 0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | exeerrordiag: 
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | exitcode: 0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,142 | INFO     | exitmsg: OK
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | cpuconsumptiontime: 19299 s
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | nevents: 400
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | neventsw: 0
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | pid: 1354249
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | pgrp: 1354249
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | corecount: 3
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | event service: False
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | sizes: {0: 2278216, 10: 2278216, 6616: 2314461, 6619: 2314461, 6622: 2314655}
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | --------------------------------------------------
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | 
[2026-02-03 06:05:15] 2026-02-03 05:04:32,143 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/1
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,156 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 06:05:15] 2026-02-03 05:04:32,157 | INFO     | job 6995418331 has completed (purged errors)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,157 | INFO     | overall cleanup function is called
[2026-02-03 06:05:15] 2026-02-03 05:04:32,206 | WARNING  | process 1354249 can no longer be monitored (due to stat problems) - aborting
[2026-02-03 06:05:15] 2026-02-03 05:04:32,241 | INFO     | using path: /var/lib/boinc2/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 06:05:15] 2026-02-03 05:04:32,294 | INFO     | number of running child processes to parent process 1354249: 1
[2026-02-03 06:05:15] 2026-02-03 05:04:32,294 | INFO     | maximum number of monitored processes: 6
[2026-02-03 06:05:15] 2026-02-03 05:04:32,294 | INFO     | aborting job monitoring since job object (job id=6995418331) has expired
[2026-02-03 06:05:15] 2026-02-03 05:04:33,159 | INFO     | --- collectZombieJob: --- 10, [1354249]
[2026-02-03 06:05:15] 2026-02-03 05:04:33,159 | INFO     | zombie collector waiting for pid 1354249
[2026-02-03 06:05:15] 2026-02-03 05:04:33,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 06:05:15] 2026-02-03 05:04:33,159 | INFO     | collected zombie processes
[2026-02-03 06:05:15] 2026-02-03 05:04:33,159 | INFO     | will attempt to kill all subprocesses of pid=1354249
[2026-02-03 06:05:15] 2026-02-03 05:04:33,213 | INFO     | process IDs to be killed: [1354249] (in reverse order)
[2026-02-03 06:05:15] 2026-02-03 05:04:33,239 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 06:05:15] 2026-02-03 05:04:33,240 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 06:05:15] 2026-02-03 05:04:33,242 | INFO     | did not find any defunct processes belonging to 1354249
[2026-02-03 06:05:15] 2026-02-03 05:04:33,243 | INFO     | did not find any defunct processes belonging to 1354249
[2026-02-03 06:05:15] 2026-02-03 05:04:33,243 | INFO     | ready for new job
[2026-02-03 06:05:15] 2026-02-03 05:04:33,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 06:05:15] 2026-02-03 05:04:33,244 | INFO     | **************************************
[2026-02-03 06:05:15] 2026-02-03 05:04:33,244 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 06:05:15] 2026-02-03 05:04:33,244 | INFO     | **************************************
[2026-02-03 06:05:15] 2026-02-03 05:04:33,244 | INFO     | 
[2026-02-03 06:05:15] 2026-02-03 05:04:33,245 | INFO     | architecture information:
[2026-02-03 06:05:15] 2026-02-03 05:04:33,245 | INFO     | executing command: cat /etc/os-release
[2026-02-03 06:05:15] 2026-02-03 05:04:33,254 | INFO     | cat /etc/os-release:
[2026-02-03 06:05:15] NAME="CentOS Linux"
[2026-02-03 06:05:15] VERSION="7 (Core)"
[2026-02-03 06:05:15] ID="centos"
[2026-02-03 06:05:15] ID_LIKE="rhel fedora"
[2026-02-03 06:05:15] VERSION_ID="7"
[2026-02-03 06:05:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 06:05:15] ANSI_COLOR="0;31"
[2026-02-03 06:05:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 06:05:15] HOME_URL="https://www.centos.org/"
[2026-02-03 06:05:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 06:05:15] 
[2026-02-03 06:05:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 06:05:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 06:05:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 06:05:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 06:05:15] 
[2026-02-03 06:05:15] 2026-02-03 05:04:33,254 | INFO     | **************************************
[2026-02-03 06:05:15] 2026-02-03 05:04:33,757 | INFO     | executing command: df -mP /var/lib/boinc2/slots/1
[2026-02-03 06:05:15] 2026-02-03 05:04:33,767 | INFO     | sufficient remaining disk space (66410512384 B)
[2026-02-03 06:05:15] 2026-02-03 05:04:33,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 06:05:15] 2026-02-03 05:04:33,767 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 06:05:15] 2026-02-03 05:04:33,767 | INFO     | update_server=False
[2026-02-03 06:05:15] 2026-02-03 05:04:33,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 06:05:15] 2026-02-03 05:04:33,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 06:05:15] 2026-02-03 05:04:33,767 | INFO     | aborting loop
[2026-02-03 06:05:15] 2026-02-03 05:04:33,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 06:05:15] 2026-02-03 05:04:33,923 | INFO     | all data control threads have been joined
[2026-02-03 06:05:15] 2026-02-03 05:04:34,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 06:05:15] 2026-02-03 05:04:34,772 | INFO     | [job] queue monitor thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:34,772 | INFO     | [job] job monitor thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:34,772 | INFO     | [job] retrieve thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:34,879 | INFO     | [payload] validate_post thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:34,928 | INFO     | [data] control thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:35,022 | INFO     | all payload control threads have been joined
[2026-02-03 06:05:15] 2026-02-03 05:04:35,128 | INFO     | all job control threads have been joined
[2026-02-03 06:05:15] 2026-02-03 05:04:35,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 06:05:15] 2026-02-03 05:04:35,702 | INFO     | [job] validate thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:35,747 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:35,879 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:35,927 | INFO     | [payload] failed_post thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:36,025 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:36,027 | INFO     | [payload] control thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:36,134 | INFO     | [job] control thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:36,169 | INFO     | [data] copytool_in thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:36,347 | INFO     | [data] copytool_out thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:39,318 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:04:44,721 | INFO     | job.realtimelogging is not enabled
[2026-02-03 06:05:15] 2026-02-03 05:04:45,724 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 06:05:15] 2026-02-03 05:05:04,538 | INFO     | PID=1349831 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 06:05:15] 2026-02-03 05:05:04,538 | INFO     | .. there are 4 such processes running
[2026-02-03 06:05:15] 2026-02-03 05:05:04,538 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 06:05:15] 2026-02-03 05:05:04,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 06:05:15] 2026-02-03 05:05:04,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 06:05:15] 2026-02-03 05:05:10,037 | INFO     | [monitor] cgroup control has ended
[2026-02-03 06:05:15] 2026-02-03 05:05:10,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101983233856)>', '<ExcThread(monitor, started 140101346645760)>']
[2026-02-03 06:05:15] 2026-02-03 05:05:10,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 06:05:15] 2026-02-03 05:05:10,562 | INFO     | [monitor] control thread has ended
[2026-02-03 06:05:15] 2026-02-03 05:05:15,542 | INFO     | all workflow threads have been joined
[2026-02-03 06:05:15] 2026-02-03 05:05:15,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 06:05:15] 2026-02-03 05:05:15,543 | INFO     | traces error code: 0
[2026-02-03 06:05:15] 2026-02-03 05:05:15,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 06:05:15] 2026-02-03 05:05:15,608 [wrapper] ==== pilot stdout END ====
[2026-02-03 06:05:15] 2026-02-03 05:05:15,610 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 06:05:15] 2026-02-03 05:05:15,612 [wrapper] pilotpid: 1349831
[2026-02-03 06:05:15] 2026-02-03 05:05:15,613 [wrapper] Pilot exit status: 0
[2026-02-03 06:05:15] 2026-02-03 05:05:15,618 [wrapper] pandaids: 6995418331
[2026-02-03 06:05:15] 2026-02-03 05:05:15,635 [wrapper] cleanup supervisor_pilot 1412847 1349832
[2026-02-03 06:05:15] 2026-02-03 05:05:15,637 [wrapper] Test setup, not cleaning
[2026-02-03 06:05:15] 2026-02-03 05:05:15,638 [wrapper] apfmon messages muted
[2026-02-03 06:05:15] 2026-02-03 05:05:15,639 [wrapper] ==== wrapper stdout END ====
[2026-02-03 06:05:15] 2026-02-03 05:05:15,641 [wrapper] ==== wrapper stderr END ====
[2026-02-03 06:05:15]  *** Error codes and diagnostics ***
[2026-02-03 06:05:15]     "exeErrorCode": 0,
[2026-02-03 06:05:15]     "exeErrorDiag": "",
[2026-02-03 06:05:15]     "pilotErrorCode": 0,
[2026-02-03 06:05:15]     "pilotErrorDiag": "",
[2026-02-03 06:05:15]  *** Listing of results directory ***
[2026-02-03 06:05:15] insgesamt 673176
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc    584422  1. Feb 05:35 pilot3.tar.gz
[2026-02-03 06:05:15] -rwx------ 1 boinc boinc     36322  1. Feb 05:38 runpilot2-wrapper.sh
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc      5111  1. Feb 05:41 queuedata.json
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc       100  3. Feb 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 06:05:15] -rwxr-xr-x 1 boinc boinc      7986  3. Feb 04:13 run_atlas
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc       105  3. Feb 04:13 job.xml
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc      9633  3. Feb 04:13 init_data.xml
[2026-02-03 06:05:15] -rw-r--r-- 2 boinc boinc 500529648  3. Feb 04:13 EVNT.48317929._000207.pool.root.1
[2026-02-03 06:05:15] drwxrwx--x 2 boinc boinc      4096  3. Feb 04:13 shared
[2026-02-03 06:05:15] -rw-r--r-- 2 boinc boinc    597759  3. Feb 04:13 input.tar.gz
[2026-02-03 06:05:15] -rw-r--r-- 2 boinc boinc     15845  3. Feb 04:13 start_atlas.sh
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc         0  3. Feb 04:13 boinc_lockfile
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc      2513  3. Feb 04:13 pandaJob.out
[2026-02-03 06:05:15] -rw------- 1 boinc boinc        52  3. Feb 04:13 setup.sh.local
[2026-02-03 06:05:15] -rw------- 1 boinc boinc   1009292  3. Feb 04:13 agis_schedconf.cvmfs.json
[2026-02-03 06:05:15] -rw------- 1 boinc boinc   1511668  3. Feb 04:13 agis_ddmendpoints.agis.ALL.json
[2026-02-03 06:05:15] -rw------- 1 boinc boinc       426  3. Feb 04:13 workernode_map.json
[2026-02-03 06:05:15] drwx------ 5 boinc boinc      4096  3. Feb 04:13 pilot3
[2026-02-03 06:05:15] -rw------- 1 boinc boinc 182284187  3. Feb 06:04 HITS.48317931._011455.pool.root.1
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc       531  3. Feb 06:04 boinc_task_state.xml
[2026-02-03 06:05:15] -rw------- 1 boinc boinc      1027  3. Feb 06:04 memory_monitor_summary.json
[2026-02-03 06:05:15] -rw------- 1 boinc boinc    308517  3. Feb 06:04 log.48317931._011455.job.log.tgz.1
[2026-02-03 06:05:15] -rw------- 1 boinc boinc      6322  3. Feb 06:04 heartbeat.json
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc      8192  3. Feb 06:04 boinc_mmap_file
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc        27  3. Feb 06:04 wrapper_checkpoint.txt
[2026-02-03 06:05:15] -rw------- 1 boinc boinc        95  3. Feb 06:05 pilot_heartbeat.json
[2026-02-03 06:05:15] -rw------- 1 boinc boinc      4892  3. Feb 06:05 pilotlog.txt
[2026-02-03 06:05:15] -rw------- 1 boinc boinc    976383  3. Feb 06:05 log.48317931._011455.job.log.1
[2026-02-03 06:05:15] -rw------- 1 boinc boinc       357  3. Feb 06:05 output.list
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc       620  3. Feb 06:05 runtime_log
[2026-02-03 06:05:15] -rw------- 1 boinc boinc   1300480  3. Feb 06:05 result.tar.gz
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc      9297  3. Feb 06:05 runtime_log.err
[2026-02-03 06:05:15] -rw------- 1 boinc boinc       642  3. Feb 06:05 GMPLDmOPe68n9Rq4apOajLDm4fhM0noT9bVooX4SDm2CPKDmJYhmLn.diag
[2026-02-03 06:05:15] -rw-r--r-- 1 boinc boinc     20880  3. Feb 06:05 stderr.txt
[2026-02-03 06:05:15] HITS file was successfully produced:
[2026-02-03 06:05:15] -rw------- 1 boinc boinc 182284187  3. Feb 06:04 shared/HITS.pool.root.1
[2026-02-03 06:05:15]  *** Contents of shared directory: ***
[2026-02-03 06:05:15] insgesamt 668692
[2026-02-03 06:05:15] -rw-r--r-- 2 boinc boinc 500529648  3. Feb 04:13 ATLAS.root_0
[2026-02-03 06:05:15] -rw-r--r-- 2 boinc boinc    597759  3. Feb 04:13 input.tar.gz
[2026-02-03 06:05:15] -rw-r--r-- 2 boinc boinc     15845  3. Feb 04:13 start_atlas.sh
[2026-02-03 06:05:15] -rw------- 1 boinc boinc 182284187  3. Feb 06:04 HITS.pool.root.1
[2026-02-03 06:05:15] -rw------- 1 boinc boinc   1300480  3. Feb 06:05 result.tar.gz
06:05:16 (1345826): run_atlas exited; CPU time 19344.448636
06:05:16 (1345826): called boinc_finish(0)

</stderr_txt>
]]>

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