Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:38:08 (20999): wrapper (7.7.26015): starting
18:38:08 (20999): wrapper: running run_atlas (--nthreads 8)
[2026-02-01 18:38:08] Arguments: --nthreads 8
[2026-02-01 18:38:08] Threads: 8
[2026-02-01 18:38:08] Checking for CVMFS
[2026-02-01 18:38:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 18:38:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 18:38:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 18:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 18:38:08] 2.11.0.0 4006 162877 69920 155758 0 50 3997915 4096001 0 130560 2 6285237 99.577 8888779 438 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-01 18:38:08] CVMFS is ok
[2026-02-01 18:38:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 18:38:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 18:38:08] Further information can be found at the LHC@home message board.
[2026-02-01 18:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 18:38:08] Checking for apptainer binary...
[2026-02-01 18:38:08] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-01 18:38:08] apptainer is not installed, using version from CVMFS
[2026-02-01 18:38:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 18:38:09] WARNING: Environment variable TMPDIR already has value [/tmp/job_11071805/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node436
[2026-02-01 18:38:09] apptainer works
[2026-02-01 18:38:09] Set ATHENA_PROC_NUMBER=8
[2026-02-01 18:38:09] Set ATHENA_CORE_NUMBER=8
[2026-02-01 18:38:09] Starting ATLAS job with PandaID=6995620802
[2026-02-01 18:38:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11071805/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 19:49:28]  *** The last 200 lines of the pilot log: ***
[2026-02-01 19:49:28]  direct_access_lan=False
[2026-02-01 19:49:28]  direct_access_wan=False
[2026-02-01 19:49:28]  domain=
[2026-02-01 19:49:28]  filesize=327682
[2026-02-01 19:49:28]  filetype=log
[2026-02-01 19:49:28]  guid=c110ac4b-2198-4f83-8384-01e037024700
[2026-02-01 19:49:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-01 19:49:28]  is_altstaged=None
[2026-02-01 19:49:28]  is_tar=False
[2026-02-01 19:49:28]  lfn=log.48431080._005337.job.log.tgz.1
[2026-02-01 19:49:28]  mtime=0
[2026-02-01 19:49:28]  protocol_id=None
[2026-02-01 19:49:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 19:49:28]  replicas=None
[2026-02-01 19:49:28]  scope=mc23_13p6TeV
[2026-02-01 19:49:28]  status=None
[2026-02-01 19:49:28]  status_code=0
[2026-02-01 19:49:28]  storage_token=
[2026-02-01 19:49:28]  surl=/tmp/job_11071805/atlas/pilot/slots/0/PanDA_Pilot-6995620802/log.48431080._005337.job.log.tgz.1
[2026-02-01 19:49:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/87/log.48431080._005337.job.log.tgz.1
[2026-02-01 19:49:28]  workdir=None
[2026-02-01 19:49:28] ]
[2026-02-01 19:49:28] 2026-02-01 18:48:43,513 | INFO     | transferring file log.48431080._005337.job.log.tgz.1 from /tmp/job_11071805/atlas/pilot/slots/0/PanDA_Pilot-6995620802/log.48431080._005337.job.log.tgz.1 to /tmp/j
[2026-02-01 19:49:28] 2026-02-01 18:48:43,513 | INFO     | executing command: /usr/bin/env mv /tmp/job_11071805/atlas/pilot/slots/0/PanDA_Pilot-6995620802/log.48431080._005337.job.log.tgz.1 /tmp/job_11071805/atlas/pilot/sl
[2026-02-01 19:49:28] 2026-02-01 18:48:43,522 | INFO     | adding to output.list: log.48431080._005337.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/87/log.48431080._005337.job.log.tg
[2026-02-01 19:49:28] 2026-02-01 18:48:43,523 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 19:49:28] 2026-02-01 18:48:43,523 | INFO     | summary of transferred files:
[2026-02-01 19:49:28] 2026-02-01 18:48:43,523 | INFO     |  -- lfn=log.48431080._005337.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 19:49:28] 2026-02-01 18:48:43,523 | INFO     | stage-out finished correctly
[2026-02-01 19:49:28] 2026-02-01 18:48:43,574 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 19:49:28] 2026-02-01 18:48:44,705 | INFO     | job 6995620802 has state=finished
[2026-02-01 19:49:28] 2026-02-01 18:48:44,705 | INFO     | preparing for final server update for job 6995620802 in state='finished'
[2026-02-01 19:49:28] 2026-02-01 18:48:44,705 | INFO     | reading metadata from: /tmp/job_11071805/atlas/pilot/slots/0/PanDA_Pilot-6995620802/jobReport.json
[2026-02-01 19:49:28] 2026-02-01 18:48:44,706 | INFO     | added worker_node to metadata from /tmp/job_11071805/atlas/pilot/slots/0/workernode_map.json
[2026-02-01 19:49:28] 2026-02-01 18:48:44,707 | INFO     | this job has now completed (state=finished)
[2026-02-01 19:49:28] 2026-02-01 18:48:44,707 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 19:49:28] 2026-02-01 18:48:44,707 | INFO     | log transfer has been attempted: DONE
[2026-02-01 19:49:28] 2026-02-01 18:48:44,707 | INFO     | job 6995620802 has finished - writing final server update
[2026-02-01 19:49:28] 2026-02-01 18:48:44,707 | INFO     | total number of processed events: 400 (read)
[2026-02-01 19:49:28] 2026-02-01 18:48:44,725 | INFO     | using path: /tmp/job_11071805/atlas/pilot/slots/0/PanDA_Pilot-6995620802/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 19:49:28] 2026-02-01 18:48:44,725 | INFO     | extracted standard info from prmon json
[2026-02-01 19:49:28] 2026-02-01 18:48:44,725 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 19:49:28] 2026-02-01 18:48:44,725 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 19:49:28] 2026-02-01 18:48:44,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 19:49:28] 2026-02-01 18:48:44,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 19:49:28] 2026-02-01 18:48:44,726 | INFO     | fitting pss+swap vs Time
[2026-02-01 19:49:28] 2026-02-01 18:48:44,726 | INFO     | sum of square deviations: 73882315.5
[2026-02-01 19:49:28] 2026-02-01 18:48:44,726 | INFO     | sum of deviations: -2783207410.999999
[2026-02-01 19:49:28] 2026-02-01 18:48:44,726 | INFO     | mean x: 1769969678.5
[2026-02-01 19:49:28] 2026-02-01 18:48:44,726 | INFO     | mean y: 2650151.0322580645
[2026-02-01 19:49:28] 2026-02-01 18:48:44,726 | INFO     | intersect: 66678859377.94104
[2026-02-01 19:49:28] 2026-02-01 18:48:44,726 | INFO     | chi2: 0.01075014319571182
[2026-02-01 19:49:28] 2026-02-01 18:48:44,726 | INFO     | current memory leak: -37.67 B/s (using 62 data points, chi2=0.01)
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | could have reported an average CPU frequency of 2412 MHz (6 samples)
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | ..............................
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | . Timing measurements:
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | . get job = 0 s
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | . initial setup = 3 s
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | . payload setup = 2 s
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | . stage-in = 0 s
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | . payload execution = 4209 s
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | . stage-out = 0 s
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | . log creation = 0 s
[2026-02-01 19:49:28] 2026-02-01 18:48:44,727 | INFO     | ..............................
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | 
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | job summary report
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | --------------------------------------------------
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | PanDA job id: 6995620802
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | task id: 48431080
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | errors: (none)
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | pilot state: finished 
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | transexitcode: 0
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | exeerrorcode: 0
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | exeerrordiag: 
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | exitcode: 0
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | exitmsg: OK
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | cpuconsumptiontime: 27597 s
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | nevents: 400
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | neventsw: 0
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | pid: 8068
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | pgrp: 8068
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | corecount: 8
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | event service: False
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | sizes: {0: 2277896, 1: 2278468, 11: 2278468, 4215: 2304589, 4216: 2313796, 4217: 2313934}
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | --------------------------------------------------
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | 
[2026-02-01 19:49:28] 2026-02-01 18:48:44,926 | INFO     | executing command: ls -lF /tmp/job_11071805/atlas/pilot/slots/0
[2026-02-01 19:49:28] 2026-02-01 18:48:44,936 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,936 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,936 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,936 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | job 6995620802 has completed (purged errors)
[2026-02-01 19:49:28] 2026-02-01 18:48:44,937 | INFO     | overall cleanup function is called
[2026-02-01 19:49:28] 2026-02-01 18:48:45,943 | INFO     | --- collectZombieJob: --- 10, [8068]
[2026-02-01 19:49:28] 2026-02-01 18:48:45,943 | INFO     | zombie collector waiting for pid 8068
[2026-02-01 19:49:28] 2026-02-01 18:48:45,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 19:49:28] 2026-02-01 18:48:45,943 | INFO     | collected zombie processes
[2026-02-01 19:49:28] 2026-02-01 18:48:45,943 | INFO     | will attempt to kill all subprocesses of pid=8068
[2026-02-01 19:49:28] 2026-02-01 18:48:46,038 | INFO     | process IDs to be killed: [8068] (in reverse order)
[2026-02-01 19:49:28] 2026-02-01 18:48:46,074 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 19:49:28] 2026-02-01 18:48:46,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 19:49:28] 2026-02-01 18:48:46,077 | INFO     | did not find any defunct processes belonging to 8068
[2026-02-01 19:49:28] 2026-02-01 18:48:46,080 | INFO     | did not find any defunct processes belonging to 8068
[2026-02-01 19:49:28] 2026-02-01 18:48:46,080 | INFO     | ready for new job
[2026-02-01 19:49:28] 2026-02-01 18:48:46,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 19:49:28] 2026-02-01 18:48:46,081 | INFO     | **************************************
[2026-02-01 19:49:28] 2026-02-01 18:48:46,081 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 19:49:28] 2026-02-01 18:48:46,081 | INFO     | **************************************
[2026-02-01 19:49:28] 2026-02-01 18:48:46,081 | INFO     | 
[2026-02-01 19:49:28] 2026-02-01 18:48:46,094 | INFO     | architecture information:
[2026-02-01 19:49:28] 2026-02-01 18:48:46,094 | INFO     | executing command: cat /etc/os-release
[2026-02-01 19:49:28] 2026-02-01 18:48:46,102 | INFO     | cat /etc/os-release:
[2026-02-01 19:49:28] NAME="CentOS Linux"
[2026-02-01 19:49:28] VERSION="7 (Core)"
[2026-02-01 19:49:28] ID="centos"
[2026-02-01 19:49:28] ID_LIKE="rhel fedora"
[2026-02-01 19:49:28] VERSION_ID="7"
[2026-02-01 19:49:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 19:49:28] ANSI_COLOR="0;31"
[2026-02-01 19:49:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 19:49:28] HOME_URL="https://www.centos.org/"
[2026-02-01 19:49:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 19:49:28] 
[2026-02-01 19:49:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 19:49:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 19:49:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 19:49:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 19:49:28] 
[2026-02-01 19:49:28] 2026-02-01 18:48:46,102 | INFO     | **************************************
[2026-02-01 19:49:28] 2026-02-01 18:48:46,604 | INFO     | executing command: df -mP /tmp/job_11071805/atlas/pilot/slots/0
[2026-02-01 19:49:28] 2026-02-01 18:48:46,612 | INFO     | sufficient remaining disk space (222416601088 B)
[2026-02-01 19:49:28] 2026-02-01 18:48:46,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 19:49:28] 2026-02-01 18:48:46,612 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 19:49:28] 2026-02-01 18:48:46,612 | INFO     | update_server=False
[2026-02-01 19:49:28] 2026-02-01 18:48:46,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 19:49:28] 2026-02-01 18:48:46,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 19:49:28] 2026-02-01 18:48:46,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 19:49:28] 2026-02-01 18:48:46,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 19:49:28] 2026-02-01 18:48:46,612 | INFO     | aborting loop
[2026-02-01 19:49:28] 2026-02-01 18:48:46,832 | INFO     | all job control threads have been joined
[2026-02-01 19:49:28] 2026-02-01 18:48:46,944 | INFO     | all payload control threads have been joined
[2026-02-01 19:49:28] 2026-02-01 18:48:47,435 | INFO     | all data control threads have been joined
[2026-02-01 19:49:28] 2026-02-01 18:48:47,617 | INFO     | [job] retrieve thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:47,617 | INFO     | [job] queue monitor thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:47,618 | INFO     | [job] job monitor thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:47,837 | INFO     | [job] control thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:47,949 | INFO     | [payload] control thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:48,047 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:48,170 | INFO     | [payload] failed_post thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:48,440 | INFO     | [data] control thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:48,618 | INFO     | [data] copytool_out thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:48,707 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:48,876 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:48,924 | INFO     | [payload] validate_post thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:49,098 | INFO     | [data] copytool_in thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:49,114 | INFO     | [job] validate thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:49,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 19:49:28] 2026-02-01 18:48:53,630 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:48:56,969 | INFO     | job.realtimelogging is not enabled
[2026-02-01 19:49:28] 2026-02-01 18:48:57,974 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 19:49:28] 2026-02-01 18:49:16,287 | INFO     | PID=29570 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-01 19:49:28] 2026-02-01 18:49:16,287 | INFO     | .. there are 2 such processes running
[2026-02-01 19:49:28] 2026-02-01 18:49:16,288 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 19:49:28] 2026-02-01 18:49:16,288 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 19:49:28] 2026-02-01 18:49:16,288 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 19:49:28] 2026-02-01 18:49:22,901 | INFO     | [monitor] cgroup control has ended
[2026-02-01 19:49:28] 2026-02-01 18:49:23,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-02-01 19:49:28] 2026-02-01 18:49:24,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 19:49:28] 2026-02-01 18:49:24,327 | INFO     | [monitor] control thread has ended
[2026-02-01 19:49:28] 2026-02-01 18:49:28,485 | INFO     | all workflow threads have been joined
[2026-02-01 19:49:28] 2026-02-01 18:49:28,486 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 19:49:28] 2026-02-01 18:49:28,486 | INFO     | traces error code: 0
[2026-02-01 19:49:28] 2026-02-01 18:49:28,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 19:49:28] 2026-02-01 18:49:28,542 [wrapper] ==== pilot stdout END ====
[2026-02-01 19:49:28] 2026-02-01 18:49:28,544 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 19:49:28] 2026-02-01 18:49:28,545 [wrapper] pilotpid: 29570
[2026-02-01 19:49:28] 2026-02-01 18:49:28,546 [wrapper] Pilot exit status: 0
[2026-02-01 19:49:28] 2026-02-01 18:49:28,551 [wrapper] pandaids: 6995620802
[2026-02-01 19:49:28] 2026-02-01 18:49:28,574 [wrapper] cleanup supervisor_pilot 15853 29571
[2026-02-01 19:49:28] 2026-02-01 18:49:28,576 [wrapper] Test setup, not cleaning
[2026-02-01 19:49:28] 2026-02-01 18:49:28,577 [wrapper] apfmon messages muted
[2026-02-01 19:49:28] 2026-02-01 18:49:28,578 [wrapper] ==== wrapper stdout END ====
[2026-02-01 19:49:28] 2026-02-01 18:49:28,579 [wrapper] ==== wrapper stderr END ====
[2026-02-01 19:49:28]  *** Error codes and diagnostics ***
[2026-02-01 19:49:28]     "exeErrorCode": 0,
[2026-02-01 19:49:28]     "exeErrorDiag": "",
[2026-02-01 19:49:28]     "pilotErrorCode": 0,
[2026-02-01 19:49:28]     "pilotErrorDiag": "",
[2026-02-01 19:49:28]  *** Listing of results directory ***
[2026-02-01 19:49:28] total 892348
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user    584422 Feb  1 06:24 pilot3.tar.gz
[2026-02-01 19:49:28] -rwx------ 1 mf493845 unix-user     36322 Feb  1 06:36 runpilot2-wrapper.sh
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user      5111 Feb  1 06:37 queuedata.json
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user       100 Feb  1 16:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 19:49:28] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb  1 16:24 run_atlas
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user       105 Feb  1 16:24 job.xml
[2026-02-01 19:49:28] drwxrwx--x 2 mf493845 unix-user       100 Feb  1 18:38 shared
[2026-02-01 19:49:28] -rw-r--r-- 2 mf493845 unix-user    597775 Feb  1 18:38 input.tar.gz
[2026-02-01 19:49:28] -rw-r--r-- 2 mf493845 unix-user 652206854 Feb  1 18:38 EVNT.48431078._000104.pool.root.1
[2026-02-01 19:49:28] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  1 18:38 start_atlas.sh
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user      6390 Feb  1 18:38 init_data.xml
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user         0 Feb  1 18:38 boinc_setup_complete
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user      8192 Feb  1 18:38 boinc_mmap_file
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user         0 Feb  1 18:38 boinc_lockfile
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user      2557 Feb  1 18:38 pandaJob.out
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user   1009765 Feb  1 18:38 agis_schedconf.cvmfs.json
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user   1511668 Feb  1 18:38 agis_ddmendpoints.agis.ALL.json
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user       416 Feb  1 18:38 workernode_map.json
[2026-02-01 19:49:28] drwx------ 5 mf493845 unix-user       440 Feb  1 18:38 pilot3
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user 255685391 Feb  1 19:48 HITS.48431080._005337.pool.root.1
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user      1033 Feb  1 19:48 memory_monitor_summary.json
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user    327682 Feb  1 19:48 log.48431080._005337.job.log.tgz.1
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user      6313 Feb  1 19:48 heartbeat.json
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user        95 Feb  1 19:49 pilot_heartbeat.json
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user      4903 Feb  1 19:49 pilotlog.txt
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user    649301 Feb  1 19:49 log.48431080._005337.job.log.1
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user       357 Feb  1 19:49 output.list
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user       620 Feb  1 19:49 runtime_log
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user    993280 Feb  1 19:49 result.tar.gz
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user      9219 Feb  1 19:49 runtime_log.err
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user       643 Feb  1 19:49 I0MODmgJf68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfoPKDmFd6Wjn.diag
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user     21427 Feb  1 19:49 stderr.txt
[2026-02-01 19:49:28] HITS file was successfully produced:
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user 255685391 Feb  1 19:48 shared/HITS.pool.root.1
[2026-02-01 19:49:28]  *** Contents of shared directory: ***
[2026-02-01 19:49:28] total 888192
[2026-02-01 19:49:28] -rw-r--r-- 2 mf493845 unix-user    597775 Feb  1 18:38 input.tar.gz
[2026-02-01 19:49:28] -rw-r--r-- 2 mf493845 unix-user 652206854 Feb  1 18:38 ATLAS.root_0
[2026-02-01 19:49:28] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  1 18:38 start_atlas.sh
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user 255685391 Feb  1 19:48 HITS.pool.root.1
[2026-02-01 19:49:28] -rw------- 1 mf493845 unix-user    993280 Feb  1 19:49 result.tar.gz
19:49:30 (20999): run_atlas exited; CPU time 27651.411674
19:49:30 (20999): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN