Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-01 12:57:42 (77552): vboxwrapper version 26210
2026-02-01 12:57:42 (77552): BOINC client version: 8.2.8
2026-02-01 12:57:43 (77552): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-02-01 12:57:44 (77552): Successfully copied 'init_data.xml' to the shared directory.
2026-02-01 12:57:45 (77552): Create VM. (boinc_8b565d9f5731c891, slot#1)
2026-02-01 12:57:46 (77552): Setting Memory Size for VM. (4400MB)
2026-02-01 12:57:47 (77552): Setting CPU Count for VM. (4)
2026-02-01 12:57:48 (77552): Setting Chipset Options for VM.
2026-02-01 12:57:48 (77552): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-01 12:57:49 (77552): Setting Boot Options for VM.
2026-02-01 12:57:50 (77552): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-01 12:57:51 (77552): Enabling VM Network Access.
2026-02-01 12:57:51 (77552): Disabling USB Support for VM.
2026-02-01 12:57:52 (77552): Disabling COM Port Support for VM.
2026-02-01 12:57:53 (77552): Disabling LPT Port Support for VM.
2026-02-01 12:57:53 (77552): Disabling Audio Support for VM.
2026-02-01 12:57:54 (77552): Disabling Clipboard Support for VM.
2026-02-01 12:57:54 (77552): Disabling Drag and Drop Support for VM.
2026-02-01 12:57:55 (77552): Adding storage controller(s) to VM.
2026-02-01 12:57:55 (77552): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-01 12:57:57 (77552): Adding VirtualBox Guest Additions to VM.
2026-02-01 12:57:58 (77552): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-01 12:57:58 (77552): forwarding host port 64013 to guest port 80
2026-02-01 12:57:58 (77552): Enabling remote desktop for VM.
2026-02-01 12:57:59 (77552): Enabling shared directory for VM.
2026-02-01 12:58:00 (77552): Starting VM using VBoxManage interface. (boinc_8b565d9f5731c891, slot#1)
2026-02-01 12:58:08 (77552): Successfully started VM. (PID = '85708')
2026-02-01 12:58:08 (77552): Reporting VM Process ID to BOINC.
2026-02-01 12:58:08 (77552): Guest Log: BIOS: VirtualBox 7.2.4
2026-02-01 12:58:08 (77552): Guest Log: CPUID EDX: 0x178bfbff
2026-02-01 12:58:08 (77552): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-01 12:58:08 (77552): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-01 12:58:08 (77552): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-01 12:58:08 (77552): Detected: Web Application Enabled (http://localhost:64013)
2026-02-01 12:58:08 (77552): Detected: Remote Desktop Enabled (localhost:64020)
2026-02-01 12:58:08 (77552): Preference change detected
2026-02-01 12:58:08 (77552): Setting CPU throttle for VM. (100%)
2026-02-01 12:58:09 (77552): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-01 12:58:10 (77552): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-01 12:58:10 (77552): Guest Log: BIOS: Booting from Hard Disk...
2026-02-01 12:58:20 (77552): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-01 12:58:20 (77552): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-01 12:58:20 (77552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-01 12:58:51 (77552): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-01 12:58:51 (77552): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-01 12:59:58 (77552): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-01 12:59:58 (77552): Guest Log: 00:00:00.000611 main     Log opened 2026-02-01T12:59:56.526672000Z
2026-02-01 12:59:58 (77552): Guest Log: 00:00:00.000913 main     OS Product: Linux
2026-02-01 12:59:58 (77552): Guest Log: 00:00:00.001034 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-01 12:59:58 (77552): Guest Log: 00:00:00.001141 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-01 12:59:58 (77552): Guest Log: 00:00:00.001382 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-01 12:59:58 (77552): Guest Log: 00:00:00.001388 main     Process ID: 1341
2026-02-01 12:59:58 (77552): Guest Log: 00:00:00.001392 main     Package type: LINUX_64BITS_GENERIC
2026-02-01 12:59:58 (77552): Guest Log: 00:00:00.005981 main     5.2.32 r132073 started. Verbose level = 0
2026-02-01 12:59:59 (77552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-01 12:59:59 (77552): Guest Log: [INFO] Mounting shared directory
2026-02-01 12:59:59 (77552): Guest Log: [INFO] Checking for init_data.xml
2026-02-01 13:00:07 (77552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-01 13:00:07 (77552): Guest Log: [INFO] Detected branch: prod
2026-02-01 13:00:07 (77552): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-01 13:00:07 (77552): Guest Log: Copying input files
2026-02-01 13:00:08 (77552): Guest Log: 00:00:10.017521 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 841 954 000ns (GuestNow=1 769 947 208 697 282 000 ns GuestLast=1 769 950 796 539 236 000 ns fSetTimeLastLoop=true )
2026-02-01 13:01:02 (77552): Guest Log: Copied input files into RunAtlas.
2026-02-01 13:01:02 (77552): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-01 13:01:02 (77552): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-01 13:01:02 (77552): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-01 13:01:02 (77552): Guest Log: Further information can be found at the LHC@home message board.
2026-02-01 13:01:37 (77552): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-01 13:01:37 (77552): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-01 13:01:37 (77552): Guest Log: 2.6.3.0 1633 1 30184 155749 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-01 13:01:47 (77552): Guest Log: copied the webapp to /var/www
2026-02-01 13:01:47 (77552): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-01 13:01:47 (77552): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-01 13:01:47 (77552): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-01 13:01:47 (77552): Guest Log:  *** Starting ATLAS job. (PandaID=6991384185 taskID=48310749) ***
2026-02-01 14:41:15 (77552): Status Report: Elapsed Time: '6002.275694'
2026-02-01 14:41:15 (77552): Status Report: CPU Time: '20015.093750'
2026-02-01 16:29:05 (77552): Status Report: Elapsed Time: '12003.782930'
2026-02-01 16:29:05 (77552): Status Report: CPU Time: '44551.812500'
2026-02-01 18:18:27 (77552): Status Report: Elapsed Time: '18005.752823'
2026-02-01 18:18:27 (77552): Status Report: CPU Time: '69770.859375'
2026-02-01 20:11:46 (77552): Status Report: Elapsed Time: '24006.284883'
2026-02-01 20:11:46 (77552): Status Report: CPU Time: '95717.140625'
2026-02-01 20:39:19 (77552): Guest Log:  *** Job finished ***
2026-02-01 20:39:19 (77552): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,075 | INFO     | PID=6043 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,076 | INFO     | found 0 job(s) in 20 queues
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,076 | INFO     | [monitor] control thread has ended
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,900 | INFO     | all workflow threads have been joined
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,901 | INFO     | end of generic workflow (traces error code: 0)
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,903 | INFO     | traces error code: 0
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:16,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,315 [wrapper] ==== pilot stdout END ====
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,323 [wrapper] ==== wrapper stdout RESUME ====
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,331 [wrapper] pilotpid: 6043
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,339 [wrapper] Pilot exit status: 0
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,756 [wrapper] pandaids: 6991384185
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,826 [wrapper] cleanup supervisor_pilot 32360 6044
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,841 [wrapper] Test setup, not cleaning
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,849 [wrapper] apfmon messages muted
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,856 [wrapper] ==== wrapper stdout END ====
2026-02-01 20:39:19 (77552): Guest Log: 2026-02-01 19:39:17,863 [wrapper] ==== wrapper stderr END ====
2026-02-01 20:39:19 (77552): Guest Log:  *** Error codes and diagnostics ***
2026-02-01 20:39:19 (77552): Guest Log:     "exeErrorCode": 0,
2026-02-01 20:39:19 (77552): Guest Log:     "exeErrorDiag": "",
2026-02-01 20:39:19 (77552): Guest Log:     "pilotErrorCode": 0,
2026-02-01 20:39:19 (77552): Guest Log:     "pilotErrorDiag": "",
2026-02-01 20:39:19 (77552): Guest Log:  *** Listing of results directory ***
2026-02-01 20:39:19 (77552): Guest Log: total 184344
2026-02-01 20:39:19 (77552): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Feb  1 05:24 pilot3.tar.gz
2026-02-01 20:39:19 (77552): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  1 05:36 runpilot2-wrapper.sh
2026-02-01 20:39:19 (77552): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  1 05:37 queuedata.json
2026-02-01 20:39:19 (77552): Guest Log: -rwxr-xr-x. 1 atlas atlas      5796 Feb  1 12:00 init_data.xml
2026-02-01 20:39:19 (77552): Guest Log: -rwxr-xr-x. 1 atlas atlas    597758 Feb  1 12:00 input.tar.gz
2026-02-01 20:39:19 (77552): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  1 12:00 start_atlas.sh
2026-02-01 20:39:19 (77552): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  1 12:01 EVNT.48310747._000027.pool.root.1 -> /data/./ATLAS.root_0
2026-02-01 20:39:19 (77552): Guest Log: -rw-r--r--. 1 atlas atlas      2522 Feb  1 12:01 pandaJob.out
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas   1010520 Feb  1 12:03 agis_schedconf.cvmfs.json
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas       426 Feb  1 12:03 workernode_map.json
2026-02-01 20:39:19 (77552): Guest Log: drwx------. 5 atlas atlas      4096 Feb  1 12:03 pilot3
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas 176189688 Feb  1 19:37 HITS.48310749._001335.pool.root.1
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas      1031 Feb  1 19:38 memory_monitor_summary.json
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas        95 Feb  1 19:38 pilot_heartbeat.json
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  1 19:38 agis_ddmendpoints.agis.ALL.json
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas    611777 Feb  1 19:38 log.48310749._001335.job.log.tgz.1
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas      6379 Feb  1 19:38 heartbeat.json
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas      5059 Feb  1 19:39 pilotlog.txt
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas   3741731 Feb  1 19:39 log.48310749._001335.job.log.1
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas       357 Feb  1 19:39 output.list
2026-02-01 20:39:19 (77552): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  1 19:39 runtime_log
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas   4372480 Feb  1 19:39 result.tar.gz
2026-02-01 20:39:19 (77552): Guest Log: -rw-r--r--. 1 atlas atlas      8770 Feb  1 19:39 runtime_log.err
2026-02-01 20:39:19 (77552): Guest Log: -rw-------. 1 atlas atlas       663 Feb  1 19:39 219LDmgJf68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmonPKDm7n9yAo.diag
2026-02-01 20:39:20 (77552): Guest Log: Looking for outputfile HITS.48310749._001335.pool.root.1
2026-02-01 20:39:20 (77552): Guest Log: HITS file was successfully produced
2026-02-01 20:39:20 (77552): Guest Log: -rw-------. 1 atlas atlas 176189688 Feb  1 19:37 /home/atlas/RunAtlas/HITS.48310749._001335.pool.root.1
2026-02-01 20:39:34 (77552): Guest Log: Successfully finished the ATLAS job!
2026-02-01 20:39:34 (77552): Guest Log: Copying the results back to the shared directory!
2026-02-01 20:39:36 (77552): Guest Log:  *** Contents of shared directory: ***
2026-02-01 20:39:36 (77552): Guest Log: total 658332
2026-02-01 20:39:36 (77552): Guest Log: -rwxrwxrwx. 1 root root 492940692 Feb  1 11:57 ATLAS.root_0
2026-02-01 20:39:36 (77552): Guest Log: -rwxrwxrwx. 1 root root 176189688 Feb  1 19:39 HITS.pool.root.1
2026-02-01 20:39:36 (77552): Guest Log: -rwxrwxrwx. 1 root root      5796 Feb  1 11:57 init_data.xml
2026-02-01 20:39:36 (77552): Guest Log: -rwxrwxrwx. 1 root root    597758 Feb  1 11:55 input.tar.gz
2026-02-01 20:39:36 (77552): Guest Log: -rwxrwxrwx. 1 root root   4372480 Feb  1 19:39 result.tar.gz
2026-02-01 20:39:36 (77552): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  1 11:55 start_atlas.sh
2026-02-01 20:39:36 (77552): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-01 20:39:37 (77552): VM Completion File Detected.
2026-02-01 20:39:37 (77552): Powering off VM.
2026-02-01 20:39:55 (77552): Guest Log: 07:39:44.133078 control  Guest control service stopped
2026-02-01 20:39:55 (77552): Guest Log: 07:39:44.513941 control  Guest control worker returned with rc=VINF_SUCCESS
2026-02-01 20:39:55 (77552): Guest Log: 07:39:44.515249 main     Session 0 is about to close ...
2026-02-01 20:39:55 (77552): Guest Log: 07:39:44.515640 main     Stopping all guest processes ...
2026-02-01 20:39:55 (77552): Guest Log: 07:39:44.515871 main     Closing all guest files ...
2026-02-01 20:39:55 (77552): Guest Log: 07:39:44.821190 main     Ended.
2026-02-01 20:39:55 (77552): Successfully stopped VM.
2026-02-01 20:39:56 (77552): Deregistering VM. (boinc_8b565d9f5731c891, slot#1)
2026-02-01 20:39:59 (77552): Removing network bandwidth throttle group from VM.
2026-02-01 20:40:00 (77552): Removing VM from VirtualBox.
2026-02-01 20:40:11 (77552): called boinc_finish(0)

</stderr_txt>
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