Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:59:22 (3451736): wrapper (7.7.26015): starting
06:59:22 (3451736): wrapper: running run_atlas (--nthreads 9)
[2026-02-01 06:59:22] Arguments: --nthreads 9
[2026-02-01 06:59:22] Threads: 9
[2026-02-01 06:59:22] Checking for CVMFS
[2026-02-01 06:59:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 06:59:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 06:59:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 06:59:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 06:59:43] 2.13.3.0 6557 55961 233968 155749 3 785 20510851 40960001 28089 16776704 0 262412444 99.673 239234426 37134 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-01 06:59:43] CVMFS is ok
[2026-02-01 06:59:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 06:59:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 06:59:43] Further information can be found at the LHC@home message board.
[2026-02-01 06:59:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 06:59:43] Checking for apptainer binary...
[2026-02-01 06:59:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 06:59:43] Running /usr/bin/apptainer --version
[2026-02-01 06:59:43] apptainer version 1.4.5-2.el9
[2026-02-01 06:59:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 06:59:44] c-212-20.aglt2.org
[2026-02-01 06:59:44] apptainer works
[2026-02-01 06:59:44] Set ATHENA_PROC_NUMBER=9
[2026-02-01 06:59:44] Set ATHENA_CORE_NUMBER=9
[2026-02-01 06:59:44] Starting ATLAS job with PandaID=6995619257
[2026-02-01 06:59:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:20:08 (3451736): BOINC client no longer exists - exiting
07:20:08 (3451736): timer handler: client dead, exiting
07:31:18 (3753517): wrapper (7.7.26015): starting
07:31:18 (3753517): wrapper: running run_atlas (--nthreads 8)
[2026-02-01 07:31:18] Arguments: --nthreads 8
[2026-02-01 07:31:18] Threads: 8
[2026-02-01 07:31:18] This job has been restarted, cleaning up previous attempt
[2026-02-01 07:31:18] Checking for CVMFS
[2026-02-01 07:31:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 07:31:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 07:31:18] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 07:31:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 07:31:19] 2.13.3.0 6557 55993 226880 155751 3 583 21514717 40960001 25818 16776704 0 263252848 99.674 239490502 37138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-01 07:31:19] CVMFS is ok
[2026-02-01 07:31:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 07:31:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 07:31:19] Further information can be found at the LHC@home message board.
[2026-02-01 07:31:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 07:31:19] Checking for apptainer binary...
[2026-02-01 07:31:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 07:31:19] Running /usr/bin/apptainer --version
[2026-02-01 07:31:19] apptainer version 1.4.5-2.el9
[2026-02-01 07:31:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 07:31:19] c-212-20.aglt2.org
[2026-02-01 07:31:19] apptainer works
[2026-02-01 07:31:19] Set ATHENA_PROC_NUMBER=8
[2026-02-01 07:31:19] Set ATHENA_CORE_NUMBER=8
[2026-02-01 07:31:20] Starting ATLAS job with PandaID=6995619257
[2026-02-01 07:31:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 12:06:35]  *** The last 200 lines of the pilot log: ***
[2026-02-01 12:06:35] 2026-02-01 17:05:59,453 | INFO     | chi2: 1.8390223259850067
[2026-02-01 12:06:35] 2026-02-01 17:05:59,552 | INFO     | sum of square deviations: 5705426273.257567
[2026-02-01 12:06:35] 2026-02-01 17:05:59,554 | INFO     | sum of deviations: 92097929303.80312
[2026-02-01 12:06:35] 2026-02-01 17:05:59,554 | INFO     | mean x: 1769957168.5530303
[2026-02-01 12:06:35] 2026-02-01 17:05:59,554 | INFO     | mean y: 2517630.371212121
[2026-02-01 12:06:35] 2026-02-01 17:05:59,554 | INFO     | intersect: -28568422098.394184
[2026-02-01 12:06:35] 2026-02-01 17:05:59,554 | INFO     | chi2: 1.8383418115701067
[2026-02-01 12:06:35] 2026-02-01 17:05:59,555 | INFO     | current chi2=1.8383418115701067 (change=0.03700414102017663 %)
[2026-02-01 12:06:35] 2026-02-01 17:05:59,555 | INFO     | right removable region: 263
[2026-02-01 12:06:35] 2026-02-01 17:05:59,555 | INFO     | sum of square deviations: 5705417733.2575655
[2026-02-01 12:06:35] 2026-02-01 17:05:59,603 | INFO     | sum of deviations: 43160720087.78028
[2026-02-01 12:06:35] 2026-02-01 17:05:59,603 | INFO     | mean x: 1769957473.5530303
[2026-02-01 12:06:35] 2026-02-01 17:05:59,603 | INFO     | mean y: 2542247.837121212
[2026-02-01 12:06:35] 2026-02-01 17:05:59,603 | INFO     | intersect: -13386948698.285059
[2026-02-01 12:06:35] 2026-02-01 17:05:59,603 | INFO     | chi2: 0.1864033473106953
[2026-02-01 12:06:35] 2026-02-01 17:05:59,603 | INFO     | current chi2=0.1864033473106953 (change=89.86399758845477 %)
[2026-02-01 12:06:35] 2026-02-01 17:05:59,604 | INFO     | sum of square deviations: 5387342383.243282
[2026-02-01 12:06:35] 2026-02-01 17:05:59,605 | INFO     | sum of deviations: 28091763712.675697
[2026-02-01 12:06:35] 2026-02-01 17:05:59,605 | INFO     | mean x: 1769957626.054054
[2026-02-01 12:06:35] 2026-02-01 17:05:59,605 | INFO     | mean y: 2549459.8803088805
[2026-02-01 12:06:35] 2026-02-01 17:05:59,605 | INFO     | intersect: -9226719421.787794
[2026-02-01 12:06:35] 2026-02-01 17:05:59,608 | INFO     | chi2: 0.09357268211077967
[2026-02-01 12:06:35] 2026-02-01 17:05:59,608 | INFO     | current chi2=0.09357268211077967 (change=49.800964703271326 %)
[2026-02-01 12:06:35] 2026-02-01 17:05:59,608 | INFO     | sum of square deviations: 5081313770.728331
[2026-02-01 12:06:35] 2026-02-01 17:05:59,610 | INFO     | sum of deviations: 15229811529.86614
[2026-02-01 12:06:35] 2026-02-01 17:05:59,610 | INFO     | mean x: 1769957778.555118
[2026-02-01 12:06:35] 2026-02-01 17:05:59,610 | INFO     | mean y: 2555869.7952755904
[2026-02-01 12:06:35] 2026-02-01 17:05:59,610 | INFO     | intersect: -5302395683.974103
[2026-02-01 12:06:35] 2026-02-01 17:05:59,610 | INFO     | chi2: 0.023390603034285154
[2026-02-01 12:06:35] 2026-02-01 17:05:59,634 | INFO     | current chi2=0.023390603034285154 (change=75.00274384932851 %)
[2026-02-01 12:06:35] 2026-02-01 17:05:59,634 | INFO     | sum of square deviations: 4787099333.212886
[2026-02-01 12:06:35] 2026-02-01 17:05:59,636 | INFO     | sum of deviations: 11678427288.469881
[2026-02-01 12:06:35] 2026-02-01 17:05:59,636 | INFO     | mean x: 1769957931.0562248
[2026-02-01 12:06:35] 2026-02-01 17:05:59,636 | INFO     | mean y: 2557690.1807228914
[2026-02-01 12:06:35] 2026-02-01 17:05:59,636 | INFO     | intersect: -4315365035.608574
[2026-02-01 12:06:35] 2026-02-01 17:05:59,637 | INFO     | chi2: 0.00829774792415576
[2026-02-01 12:06:35] 2026-02-01 17:05:59,637 | INFO     | current chi2=0.00829774792415576 (change=64.52529286229516 %)
[2026-02-01 12:06:35] 2026-02-01 17:05:59,637 | INFO     | sum of square deviations: 4504466508.196749
[2026-02-01 12:06:35] 2026-02-01 17:05:59,639 | INFO     | sum of deviations: 11842874632.934439
[2026-02-01 12:06:35] 2026-02-01 17:05:59,639 | INFO     | mean x: 1769958083.557377
[2026-02-01 12:06:35] 2026-02-01 17:05:59,639 | INFO     | mean y: 2557600.3975409837
[2026-02-01 12:06:35] 2026-02-01 17:05:59,639 | INFO     | intersect: -4650910607.430312
[2026-02-01 12:06:35] 2026-02-01 17:05:59,639 | INFO     | chi2: 0.00786579576462475
[2026-02-01 12:06:35] 2026-02-01 17:05:59,639 | INFO     | current chi2=0.00786579576462475 (change=5.205655359492709 %)
[2026-02-01 12:06:35] 2026-02-01 17:05:59,639 | INFO     | left removable region: 50
[2026-02-01 12:06:35] 2026-02-01 17:05:59,640 | INFO     | sum of square deviations: 2996479712.206583
[2026-02-01 12:06:35] 2026-02-01 17:05:59,641 | INFO     | sum of deviations: 12092335808.436617
[2026-02-01 12:06:35] 2026-02-01 17:05:59,641 | INFO     | mean x: 1769958663.0610328
[2026-02-01 12:06:35] 2026-02-01 17:05:59,641 | INFO     | mean y: 2556621.1971830986
[2026-02-01 12:06:35] 2026-02-01 17:05:59,641 | INFO     | intersect: -7140136330.668185
[2026-02-01 12:06:35] 2026-02-01 17:05:59,641 | INFO     | chi2: 0.0008921352388511818
[2026-02-01 12:06:35] 2026-02-01 17:05:59,642 | INFO     | current memory leak: 4.04 B/s (using 213 data points, chi2=0.00)
[2026-02-01 12:06:35] 2026-02-01 17:05:59,642 | INFO     | could have reported an average CPU frequency of 3349 MHz (13 samples)
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | ..............................
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | . Timing measurements:
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | . get job = 0 s
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | . initial setup = 1 s
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | . payload setup = 15 s
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | . stage-in = 0 s
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | . payload execution = 16412 s
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | . stage-out = 5 s
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | . log creation = 0 s
[2026-02-01 12:06:35] 2026-02-01 17:05:59,643 | INFO     | ..............................
[2026-02-01 12:06:35] 2026-02-01 17:05:59,946 | INFO     | 
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | job summary report
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | --------------------------------------------------
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | PanDA job id: 6995619257
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | task id: 48431080
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | errors: (none)
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | pilot state: finished 
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | transexitcode: 0
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | exeerrorcode: 0
[2026-02-01 12:06:35] 2026-02-01 17:05:59,947 | INFO     | exeerrordiag: 
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | exitcode: 0
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | exitmsg: OK
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | cpuconsumptiontime: 42040 s
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | nevents: 400
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | neventsw: 0
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | pid: 3792802
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | pgrp: 3792802
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | corecount: 8
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | event service: False
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | sizes: {0: 2277881, 1: 2278342, 11: 2278342, 16433: 2309806, 16439: 2318888, 16441: 2319026}
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | --------------------------------------------------
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | 
[2026-02-01 12:06:35] 2026-02-01 17:05:59,948 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-01 12:06:35] 2026-02-01 17:06:00,017 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,017 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,017 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,017 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | job 6995619257 has completed (purged errors)
[2026-02-01 12:06:35] 2026-02-01 17:06:00,018 | INFO     | overall cleanup function is called
[2026-02-01 12:06:35] 2026-02-01 17:06:01,083 | INFO     | --- collectZombieJob: --- 10, [3792802]
[2026-02-01 12:06:35] 2026-02-01 17:06:01,098 | INFO     | zombie collector waiting for pid 3792802
[2026-02-01 12:06:35] 2026-02-01 17:06:01,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 12:06:35] 2026-02-01 17:06:01,098 | INFO     | collected zombie processes
[2026-02-01 12:06:35] 2026-02-01 17:06:01,098 | INFO     | will attempt to kill all subprocesses of pid=3792802
[2026-02-01 12:06:35] 2026-02-01 17:06:01,327 | INFO     | PID=3776829 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-01 12:06:35] 2026-02-01 17:06:01,328 | INFO     | .. there are 38 such processes running
[2026-02-01 12:06:35] 2026-02-01 17:06:01,806 | INFO     | process IDs to be killed: [3792802] (in reverse order)
[2026-02-01 12:06:35] 2026-02-01 17:06:02,007 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 12:06:35] 2026-02-01 17:06:02,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 12:06:35] 2026-02-01 17:06:02,038 | INFO     | did not find any defunct processes belonging to 3792802
[2026-02-01 12:06:35] 2026-02-01 17:06:02,123 | INFO     | did not find any defunct processes belonging to 3792802
[2026-02-01 12:06:35] 2026-02-01 17:06:02,123 | INFO     | ready for new job
[2026-02-01 12:06:35] 2026-02-01 17:06:02,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 12:06:35] 2026-02-01 17:06:02,127 | INFO     | **************************************
[2026-02-01 12:06:35] 2026-02-01 17:06:02,128 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 12:06:35] 2026-02-01 17:06:02,128 | INFO     | **************************************
[2026-02-01 12:06:35] 2026-02-01 17:06:02,128 | INFO     | 
[2026-02-01 12:06:35] 2026-02-01 17:06:02,145 | INFO     | architecture information:
[2026-02-01 12:06:35] 2026-02-01 17:06:02,171 | INFO     | executing command: cat /etc/os-release
[2026-02-01 12:06:35] 2026-02-01 17:06:02,334 | INFO     | cat /etc/os-release:
[2026-02-01 12:06:35] NAME="CentOS Linux"
[2026-02-01 12:06:35] VERSION="7 (Core)"
[2026-02-01 12:06:35] ID="centos"
[2026-02-01 12:06:35] ID_LIKE="rhel fedora"
[2026-02-01 12:06:35] VERSION_ID="7"
[2026-02-01 12:06:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 12:06:35] ANSI_COLOR="0;31"
[2026-02-01 12:06:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 12:06:35] HOME_URL="https://www.centos.org/"
[2026-02-01 12:06:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 12:06:35] 
[2026-02-01 12:06:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 12:06:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 12:06:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 12:06:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 12:06:35] 
[2026-02-01 12:06:35] 2026-02-01 17:06:02,335 | INFO     | **************************************
[2026-02-01 12:06:35] 2026-02-01 17:06:02,846 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-01 12:06:35] 2026-02-01 17:06:02,879 | INFO     | sufficient remaining disk space (123426832384 B)
[2026-02-01 12:06:35] 2026-02-01 17:06:02,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 12:06:35] 2026-02-01 17:06:02,880 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 12:06:35] 2026-02-01 17:06:02,881 | INFO     | update_server=False
[2026-02-01 12:06:35] 2026-02-01 17:06:02,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 12:06:35] 2026-02-01 17:06:02,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 12:06:35] 2026-02-01 17:06:02,882 | INFO     | aborting loop
[2026-02-01 12:06:35] 2026-02-01 17:06:03,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 12:06:35] 2026-02-01 17:06:03,361 | INFO     | all job control threads have been joined
[2026-02-01 12:06:35] 2026-02-01 17:06:03,471 | INFO     | all data control threads have been joined
[2026-02-01 12:06:35] 2026-02-01 17:06:03,637 | INFO     | all payload control threads have been joined
[2026-02-01 12:06:35] 2026-02-01 17:06:03,887 | INFO     | [job] retrieve thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:03,904 | INFO     | [job] job monitor thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:04,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 12:06:35] 2026-02-01 17:06:04,385 | INFO     | [job] control thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:04,497 | INFO     | [data] control thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:04,599 | INFO     | [payload] failed_post thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:04,611 | INFO     | [payload] validate_post thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:04,643 | INFO     | [payload] control thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:04,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 12:06:35] 2026-02-01 17:06:04,982 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:04,986 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:04,991 | INFO     | [job] validate thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:05,080 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:05,084 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:05,120 | INFO     | [data] copytool_in thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:05,143 | INFO     | [data] copytool_out thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:05,785 | INFO     | [job] queue monitor thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:08,083 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 12:06:35] 2026-02-01 17:06:17,192 | INFO     | [monitor] cgroup control has ended
[2026-02-01 12:06:35] 2026-02-01 17:06:17,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540589807424)>', '<ExcThread(monitor, started 140540037289728)>']
[2026-02-01 12:06:35] 2026-02-01 17:06:22,983 | INFO     | all workflow threads have been joined
[2026-02-01 12:06:35] 2026-02-01 17:06:22,983 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 12:06:35] 2026-02-01 17:06:22,983 | INFO     | traces error code: 0
[2026-02-01 12:06:35] 2026-02-01 17:06:22,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 12:06:35] 2026-02-01 17:06:34,172 | INFO     | PID=3776829 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 12:06:35] 2026-02-01 17:06:34,172 | INFO     | .. there are 38 such processes running
[2026-02-01 12:06:35] 2026-02-01 17:06:34,173 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 12:06:35] 2026-02-01 17:06:34,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 12:06:35] 2026-02-01 17:06:34,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 12:06:35] 2026-02-01 17:06:34,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 12:06:35] 2026-02-01 17:06:34,173 | INFO     | [monitor] control thread has ended
[2026-02-01 12:06:35] 2026-02-01 17:06:35,087 [wrapper] ==== pilot stdout END ====
[2026-02-01 12:06:35] 2026-02-01 17:06:35,092 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 12:06:35] 2026-02-01 17:06:35,096 [wrapper] pilotpid: 3776829
[2026-02-01 12:06:35] 2026-02-01 17:06:35,099 [wrapper] Pilot exit status: 0
[2026-02-01 12:06:35] 2026-02-01 17:06:35,185 [wrapper] pandaids: 6995619257 6995619257
[2026-02-01 12:06:35] 2026-02-01 17:06:35,462 [wrapper] cleanup supervisor_pilot 1129969 3776830
[2026-02-01 12:06:35] 2026-02-01 17:06:35,494 [wrapper] Test setup, not cleaning
[2026-02-01 12:06:35] 2026-02-01 17:06:35,502 [wrapper] apfmon messages muted
[2026-02-01 12:06:35] 2026-02-01 17:06:35,509 [wrapper] ==== wrapper stdout END ====
[2026-02-01 12:06:35] 2026-02-01 17:06:35,515 [wrapper] ==== wrapper stderr END ====
[2026-02-01 12:06:35]  *** Error codes and diagnostics ***
[2026-02-01 12:06:35]     "exeErrorCode": 0,
[2026-02-01 12:06:35]     "exeErrorDiag": "",
[2026-02-01 12:06:35]     "pilotErrorCode": 0,
[2026-02-01 12:06:35]     "pilotErrorDiag": "",
[2026-02-01 12:06:35]  *** Listing of results directory ***
[2026-02-01 12:06:35] total 1531120
[2026-02-01 12:06:35] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-01 12:06:35] -rwx------. 1 boincer umatlas     36322 Feb  1 00:18 runpilot2-wrapper.sh
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas    584422 Feb  1 00:18 pilot3.tar.gz
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas      5111 Feb  1 00:19 queuedata.json
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas       100 Feb  1 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 12:06:35] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  1 06:59 run_atlas
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas       105 Feb  1 06:59 job.xml
[2026-02-01 12:06:35] -rw-r--r--. 3 boincer umatlas 653112033 Feb  1 06:59 EVNT.48431078._000091.pool.root.1
[2026-02-01 12:06:35] -rw-r--r--. 3 boincer umatlas 653112033 Feb  1 06:59 ATLAS.root_0
[2026-02-01 12:06:35] -rw-r--r--. 2 boincer umatlas     15845 Feb  1 06:59 start_atlas.sh
[2026-02-01 12:06:35] drwxrwx--x. 2 boincer umatlas      4096 Feb  1 06:59 shared
[2026-02-01 12:06:35] -rw-r--r--. 2 boincer umatlas    597760 Feb  1 06:59 input.tar.gz
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas         0 Feb  1 06:59 boinc_lockfile
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas      2557 Feb  1 07:31 pandaJob.out
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas        57 Feb  1 07:31 setup.sh.local
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas   1010528 Feb  1 07:31 agis_schedconf.cvmfs.json
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas       429 Feb  1 07:31 workernode_map.json
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas      6959 Feb  1 12:04 init_data.xml
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas 252874692 Feb  1 12:05 HITS.48431080._004684.pool.root.1
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas       531 Feb  1 12:05 boinc_task_state.xml
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas      1044 Feb  1 12:05 memory_monitor_summary.json
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas   1511668 Feb  1 12:05 agis_ddmendpoints.agis.ALL.json
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas    474709 Feb  1 12:05 log.48431080._004684.job.log.tgz.1
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas      6349 Feb  1 12:05 heartbeat.json
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas       823 Feb  1 12:06 pilotlog.txt
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas        96 Feb  1 12:06 pilot_heartbeat.json
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas   1934680 Feb  1 12:06 log.48431080._004684.job.log.1
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas       357 Feb  1 12:06 output.list
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas       620 Feb  1 12:06 runtime_log
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas   2426880 Feb  1 12:06 result.tar.gz
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas        28 Feb  1 12:06 wrapper_checkpoint.txt
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas      9427 Feb  1 12:06 runtime_log.err
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas       783 Feb  1 12:06 bqULDmL2e68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6dPKDmhGPomn.diag
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas      8192 Feb  1 12:06 boinc_mmap_file
[2026-02-01 12:06:35] -rw-r--r--. 1 boincer umatlas     23411 Feb  1 12:06 stderr.txt
[2026-02-01 12:06:35] HITS file was successfully produced:
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas 252874692 Feb  1 12:05 shared/HITS.pool.root.1
[2026-02-01 12:06:35]  *** Contents of shared directory: ***
[2026-02-01 12:06:35] total 887736
[2026-02-01 12:06:35] -rw-r--r--. 3 boincer umatlas 653112033 Feb  1 06:59 ATLAS.root_0
[2026-02-01 12:06:35] -rw-r--r--. 2 boincer umatlas     15845 Feb  1 06:59 start_atlas.sh
[2026-02-01 12:06:35] -rw-r--r--. 2 boincer umatlas    597760 Feb  1 06:59 input.tar.gz
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas 252874692 Feb  1 12:05 HITS.pool.root.1
[2026-02-01 12:06:35] -rw-------. 1 boincer umatlas   2426880 Feb  1 12:06 result.tar.gz
12:06:37 (3753517): run_atlas exited; CPU time 42674.363293
12:06:37 (3753517): called boinc_finish(0)

</stderr_txt>
]]>

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