Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:52:01 (938086): wrapper (7.7.26015): starting
23:52:01 (938086): wrapper: running run_atlas (--nthreads 3)
[2026-02-01 23:52:01] Arguments: --nthreads 3
[2026-02-01 23:52:01] Threads: 3
[2026-02-01 23:52:01] Checking for CVMFS
[2026-02-01 23:52:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 23:52:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 23:52:01] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 23:52:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 23:52:01] 2.9.2.0 4027610 6394 87420 155765 2 50 25134891 36864001 0 130560 0 2881707 99.987 199910 13418 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 23:52:01] CVMFS is ok
[2026-02-01 23:52:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 23:52:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 23:52:01] Further information can be found at the LHC@home message board.
[2026-02-01 23:52:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 23:52:01] Checking for apptainer binary...
[2026-02-01 23:52:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 23:52:01] Running /usr/bin/apptainer --version
[2026-02-01 23:52:01] apptainer version 1.4.1-1.1
[2026-02-01 23:52:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 23:52:01] magicA246a
[2026-02-01 23:52:01] apptainer works
[2026-02-01 23:52:01] Set ATHENA_PROC_NUMBER=3
[2026-02-01 23:52:01] Set ATHENA_CORE_NUMBER=3
[2026-02-01 23:52:01] Starting ATLAS job with PandaID=6995621718
[2026-02-01 23:52:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 01:45:30]  *** The last 200 lines of the pilot log: ***
[2026-02-02 01:45:30] 2026-02-02 00:45:11,795 | INFO     | **************************************
[2026-02-02 01:45:30] 2026-02-02 00:45:12,299 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-02 01:45:30] 2026-02-02 00:45:12,312 | INFO     | sufficient remaining disk space (275652804608 B)
[2026-02-02 01:45:30] 2026-02-02 00:45:12,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 01:45:30] 2026-02-02 00:45:12,312 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 01:45:30] 2026-02-02 00:45:12,312 | INFO     | update_server=False
[2026-02-02 01:45:30] 2026-02-02 00:45:12,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 01:45:30] 2026-02-02 00:45:12,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 01:45:30] 2026-02-02 00:45:12,312 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-02 01:45:30] 2026-02-02 00:45:12,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 01:45:30] 2026-02-02 00:45:12,313 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 01:45:30] 2026-02-02 00:45:12,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 01:45:30] 2026-02-02 00:45:12,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 01:45:30] 2026-02-02 00:45:12,398 | INFO     | all job control threads have been joined
[2026-02-02 01:45:30] 2026-02-02 00:45:12,752 | INFO     | all payload control threads have been joined
[2026-02-02 01:45:30] 2026-02-02 00:45:12,795 | INFO     | all data control threads have been joined
[2026-02-02 01:45:30] 2026-02-02 00:45:13,318 | INFO     | [job] retrieve thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:13,318 | INFO     | [job] queue monitor thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:13,325 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:13,331 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:13,400 | INFO     | [job] control thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:13,458 | INFO     | [data] copytool_in thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:13,580 | INFO     | [payload] validate_post thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:13,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 01:45:30] 2026-02-02 00:45:13,757 | INFO     | [payload] control thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:13,800 | INFO     | [data] control thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:14,299 | INFO     | [payload] failed_post thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:14,733 | INFO     | [job] validate thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:14,753 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:15,618 | INFO     | [data] copytool_out thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:15,710 | WARNING  | process 946552 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 01:45:30] 2026-02-02 00:45:15,749 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 01:45:30] 2026-02-02 00:45:15,749 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 01:45:30] 2026-02-02 00:45:15,750 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-02 01:45:30] 2026-02-02 00:45:15,750 | WARNING  | maxPSS not found in memory monitor output
[2026-02-02 01:45:30] 2026-02-02 00:45:15,750 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6995621718/payload.stdout) since it has not been created yet
[2026-02-02 01:45:30] 2026-02-02 00:45:15,750 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-02 01:45:30] 2026-02-02 00:45:15,760 | INFO     | sufficient remaining disk space (275652804608 B)
[2026-02-02 01:45:30] 2026-02-02 00:45:15,760 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-02 01:45:30] 2026-02-02 00:45:15,760 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6995621718/HITS.48431080._005442.pool.root.1 since it does not exist
[2026-02-02 01:45:30] 2026-02-02 00:45:15,812 | INFO     | number of running child processes to parent process 946552: 1
[2026-02-02 01:45:30] 2026-02-02 00:45:15,812 | INFO     | maximum number of monitored processes: 6
[2026-02-02 01:45:30] 2026-02-02 00:45:15,812 | INFO     | aborting job monitoring since job object (job id=6995621718) has expired
[2026-02-02 01:45:30] 2026-02-02 00:45:15,812 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 01:45:30] 2026-02-02 00:45:15,812 | INFO     | will abort loop
[2026-02-02 01:45:30] 2026-02-02 00:45:16,319 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:16,816 | INFO     | [job] job monitor thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:19,441 | INFO     | [monitor] cgroup control has ended
[2026-02-02 01:45:30] 2026-02-02 00:45:22,698 | INFO     | job.realtimelogging is not enabled
[2026-02-02 01:45:30] 2026-02-02 00:45:23,701 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 01:45:30] 2026-02-02 00:45:25,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631737968448)>', '<ExcThread(monitor, started 140630642648832)>']
[2026-02-02 01:45:30] 2026-02-02 00:45:25,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 01:45:30] 2026-02-02 00:45:25,377 | INFO     | [monitor] control thread has ended
[2026-02-02 01:45:30] 2026-02-02 00:45:30,381 | INFO     | all workflow threads have been joined
[2026-02-02 01:45:30] 2026-02-02 00:45:30,381 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 01:45:30] 2026-02-02 00:45:30,382 | INFO     | traces error code: 0
[2026-02-02 01:45:30] 2026-02-02 00:45:30,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 01:45:30] 2026-02-02 00:45:30,434 [wrapper] ==== pilot stdout END ====
[2026-02-02 01:45:30] 2026-02-02 00:45:30,437 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 01:45:30] 2026-02-02 00:45:30,439 [wrapper] pilotpid: 942128
[2026-02-02 01:45:30] 2026-02-02 00:45:30,441 [wrapper] Pilot exit status: 0
[2026-02-02 01:45:30] 2026-02-02 00:45:30,449 [wrapper] pandaids: 6995621718
[2026-02-02 01:45:30] 2026-02-02 00:45:30,468 [wrapper] cleanup supervisor_pilot  953875 942129
[2026-02-02 01:45:30] 2026-02-02 00:45:30,470 [wrapper] Test setup, not cleaning
[2026-02-02 01:45:30] 2026-02-02 00:45:30,473 [wrapper] apfmon messages muted
[2026-02-02 01:45:30] 2026-02-02 00:45:30,475 [wrapper] ==== wrapper stdout END ====
[2026-02-02 01:45:30] 2026-02-02 00:45:30,477 [wrapper] ==== wrapper stderr END ====
[2026-02-02 01:45:30]  *** Error codes and diagnostics ***
[2026-02-02 01:45:30]     "exeErrorCode": 0,
[2026-02-02 01:45:30]     "exeErrorDiag": "",
[2026-02-02 01:45:30]     "pilotErrorCode": 0,
[2026-02-02 01:45:30]     "pilotErrorDiag": "",
[2026-02-02 01:45:30]  *** Listing of results directory ***
[2026-02-02 01:45:30] total 890568
[2026-02-02 01:45:30] -rwx------ 1 boinc boinc     36322 Feb  1 06:24 runpilot2-wrapper.sh
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc      5111 Feb  1 06:24 queuedata.json
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc    584422 Feb  1 06:24 pilot3.tar.gz
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc       100 Feb  1 23:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 01:45:30] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 23:52 run_atlas
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc       105 Feb  1 23:52 job.xml
[2026-02-02 01:45:30] -rw-r--r-- 2 boinc boinc 645533503 Feb  1 23:52 EVNT.48431078._000106.pool.root.1
[2026-02-02 01:45:30] -rw-r--r-- 2 boinc boinc    597771 Feb  1 23:52 input.tar.gz
[2026-02-02 01:45:30] -rw-r--r-- 2 boinc boinc     15845 Feb  1 23:52 start_atlas.sh
[2026-02-02 01:45:30] drwxrwx--x 2 boinc boinc      4096 Feb  1 23:52 shared
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc         0 Feb  1 23:52 boinc_setup_complete
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc      6447 Feb  1 23:52 init_data.xml
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc         0 Feb  1 23:52 boinc_lockfile
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc      2557 Feb  1 23:52 pandaJob.out
[2026-02-02 01:45:30] -rw------- 1 boinc boinc   1009765 Feb  1 23:52 agis_schedconf.cvmfs.json
[2026-02-02 01:45:30] -rw------- 1 boinc boinc   1511668 Feb  1 23:52 agis_ddmendpoints.agis.ALL.json
[2026-02-02 01:45:30] -rw------- 1 boinc boinc       428 Feb  1 23:52 workernode_map.json
[2026-02-02 01:45:30] drwx------ 5 boinc boinc      4096 Feb  1 23:52 pilot3
[2026-02-02 01:45:30] -rw------- 1 boinc boinc        95 Feb  2 01:44 pilot_heartbeat.json
[2026-02-02 01:45:30] -rw------- 1 boinc boinc 259935475 Feb  2 01:44 HITS.48431080._005442.pool.root.1
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc       530 Feb  2 01:45 boinc_task_state.xml
[2026-02-02 01:45:30] -rw------- 1 boinc boinc      1026 Feb  2 01:45 memory_monitor_summary.json
[2026-02-02 01:45:30] -rw------- 1 boinc boinc    295716 Feb  2 01:45 log.48431080._005442.job.log.tgz.1
[2026-02-02 01:45:30] -rw------- 1 boinc boinc      6316 Feb  2 01:45 heartbeat.json
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc      8192 Feb  2 01:45 boinc_mmap_file
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc        27 Feb  2 01:45 wrapper_checkpoint.txt
[2026-02-02 01:45:30] -rw------- 1 boinc boinc      6123 Feb  2 01:45 pilotlog.txt
[2026-02-02 01:45:30] -rw------- 1 boinc boinc    976755 Feb  2 01:45 log.48431080._005442.job.log.1
[2026-02-02 01:45:30] -rw------- 1 boinc boinc       357 Feb  2 01:45 output.list
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc       620 Feb  2 01:45 runtime_log
[2026-02-02 01:45:30] -rw------- 1 boinc boinc   1290240 Feb  2 01:45 result.tar.gz
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc      8916 Feb  2 01:45 runtime_log.err
[2026-02-02 01:45:30] -rw------- 1 boinc boinc       661 Feb  2 01:45 hVDODmT7e68n9Rq4apOajLDm4fhM0noT9bVooX4SDmpIPKDmTFFRXn.diag
[2026-02-02 01:45:30] -rw-r--r-- 1 boinc boinc      9763 Feb  2 01:45 stderr.txt
[2026-02-02 01:45:30] HITS file was successfully produced:
[2026-02-02 01:45:30] -rw------- 1 boinc boinc 259935475 Feb  2 01:44 shared/HITS.pool.root.1
[2026-02-02 01:45:30]  *** Contents of shared directory: ***
[2026-02-02 01:45:30] total 886116
[2026-02-02 01:45:30] -rw-r--r-- 2 boinc boinc 645533503 Feb  1 23:52 ATLAS.root_0
[2026-02-02 01:45:30] -rw-r--r-- 2 boinc boinc    597771 Feb  1 23:52 input.tar.gz
[2026-02-02 01:45:30] -rw-r--r-- 2 boinc boinc     15845 Feb  1 23:52 start_atlas.sh
[2026-02-02 01:45:30] -rw------- 1 boinc boinc 259935475 Feb  2 01:44 HITS.pool.root.1
[2026-02-02 01:45:30] -rw------- 1 boinc boinc   1290240 Feb  2 01:45 result.tar.gz
01:45:32 (938086): run_atlas exited; CPU time 19696.199023
01:45:32 (938086): called boinc_finish(0)

</stderr_txt>
]]>

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