Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:05:43 (28663): wrapper (7.7.26015): starting
05:05:43 (28663): wrapper: running run_atlas (--nthreads 12)
[2026-02-01 05:05:43] Arguments: --nthreads 12
[2026-02-01 05:05:43] Threads: 12
[2026-02-01 05:05:43] Checking for CVMFS
[2026-02-01 05:05:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 05:05:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 05:05:43] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 05:05:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 05:05:43] 2.11.2.0 25590 284700 95320 155745 0 52 13300625 20275200 1 130560 2 134782910 99.949 13663172 25511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-01 05:05:43] CVMFS is ok
[2026-02-01 05:05:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 05:05:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 05:05:43] Further information can be found at the LHC@home message board.
[2026-02-01 05:05:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 05:05:43] Checking for apptainer binary...
[2026-02-01 05:05:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 05:05:43] Running /usr/bin/apptainer --version
[2026-02-01 05:05:43] apptainer version 1.3.2-1.el7
[2026-02-01 05:05:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 05:05:44] c-205-24.aglt2.org
[2026-02-01 05:05:44] apptainer works
[2026-02-01 05:05:45] Set ATHENA_PROC_NUMBER=12
[2026-02-01 05:05:45] Set ATHENA_CORE_NUMBER=12
[2026-02-01 05:05:45] Starting ATLAS job with PandaID=6995417840
[2026-02-01 05:05:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 06:24:18]  *** The last 200 lines of the pilot log: ***
[2026-02-01 06:24:18]  filetype=log
[2026-02-01 06:24:18]  guid=3ecbb23f-9d99-4121-b575-15283ae39b33
[2026-02-01 06:24:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-01 06:24:18]  is_altstaged=None
[2026-02-01 06:24:18]  is_tar=False
[2026-02-01 06:24:18]  lfn=log.48317952._006196.job.log.tgz.1
[2026-02-01 06:24:18]  mtime=0
[2026-02-01 06:24:18]  protocol_id=None
[2026-02-01 06:24:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 06:24:18]  replicas=None
[2026-02-01 06:24:18]  scope=mc23_13p6TeV
[2026-02-01 06:24:18]  status=None
[2026-02-01 06:24:18]  status_code=0
[2026-02-01 06:24:18]  storage_token=
[2026-02-01 06:24:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6995417840/log.48317952._006196.job.log.tgz.1
[2026-02-01 06:24:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/a9/log.48317952._006196.job.log.tgz.1
[2026-02-01 06:24:18]  workdir=None
[2026-02-01 06:24:18] ]
[2026-02-01 06:24:18] 2026-02-01 11:23:26,825 | INFO     | transferring file log.48317952._006196.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6995417840/log.48317952._006196.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-01 06:24:18] 2026-02-01 11:23:26,826 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6995417840/log.48317952._006196.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317952._006196.job
[2026-02-01 06:24:18] 2026-02-01 11:23:26,848 | INFO     | adding to output.list: log.48317952._006196.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/a9/log.48317952._006196.job.log.tg
[2026-02-01 06:24:18] 2026-02-01 11:23:26,849 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 06:24:18] 2026-02-01 11:23:26,849 | INFO     | summary of transferred files:
[2026-02-01 06:24:18] 2026-02-01 11:23:26,850 | INFO     |  -- lfn=log.48317952._006196.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 06:24:18] 2026-02-01 11:23:26,850 | INFO     | stage-out finished correctly
[2026-02-01 06:24:18] 2026-02-01 11:23:27,722 | INFO     | time since job start (4643s) is within the limit (349056.0s)
[2026-02-01 06:24:18] 2026-02-01 11:23:27,908 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 06:24:18] 2026-02-01 11:23:27,990 | INFO     | job 6995417840 has state=finished
[2026-02-01 06:24:18] 2026-02-01 11:23:27,990 | INFO     | preparing for final server update for job 6995417840 in state='finished'
[2026-02-01 06:24:18] 2026-02-01 11:23:27,991 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6995417840/jobReport.json
[2026-02-01 06:24:18] 2026-02-01 11:23:27,993 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-01 06:24:18] 2026-02-01 11:23:27,994 | INFO     | this job has now completed (state=finished)
[2026-02-01 06:24:18] 2026-02-01 11:23:27,994 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 06:24:18] 2026-02-01 11:23:27,994 | INFO     | log transfer has been attempted: DONE
[2026-02-01 06:24:18] 2026-02-01 11:23:27,995 | INFO     | job 6995417840 has finished - writing final server update
[2026-02-01 06:24:18] 2026-02-01 11:23:27,995 | INFO     | total number of processed events: 400 (read)
[2026-02-01 06:24:18] 2026-02-01 11:23:27,998 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6995417840/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 06:24:18] 2026-02-01 11:23:27,998 | INFO     | extracted standard info from prmon json
[2026-02-01 06:24:18] 2026-02-01 11:23:27,998 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 06:24:18] 2026-02-01 11:23:27,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 06:24:18] 2026-02-01 11:23:27,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 06:24:18] 2026-02-01 11:23:27,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 06:24:18] 2026-02-01 11:23:28,000 | INFO     | fitting pss+swap vs Time
[2026-02-01 06:24:18] 2026-02-01 11:23:28,000 | INFO     | sum of square deviations: 101843770.0
[2026-02-01 06:24:18] 2026-02-01 11:23:28,001 | INFO     | sum of deviations: -1338647928.0
[2026-02-01 06:24:18] 2026-02-01 11:23:28,001 | INFO     | mean x: 1769942768.0
[2026-02-01 06:24:18] 2026-02-01 11:23:28,001 | INFO     | mean y: 2695400.797101449
[2026-02-01 06:24:18] 2026-02-01 11:23:28,001 | INFO     | intersect: 23267056284.74498
[2026-02-01 06:24:18] 2026-02-01 11:23:28,001 | INFO     | chi2: 0.051599963920560356
[2026-02-01 06:24:18] 2026-02-01 11:23:28,001 | INFO     | current memory leak: -13.14 B/s (using 69 data points, chi2=0.05)
[2026-02-01 06:24:18] 2026-02-01 11:23:28,002 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-02-01 06:24:18] 2026-02-01 11:23:28,002 | INFO     | ..............................
[2026-02-01 06:24:18] 2026-02-01 11:23:28,002 | INFO     | . Timing measurements:
[2026-02-01 06:24:18] 2026-02-01 11:23:28,002 | INFO     | . get job = 0 s
[2026-02-01 06:24:18] 2026-02-01 11:23:28,002 | INFO     | . initial setup = 7 s
[2026-02-01 06:24:18] 2026-02-01 11:23:28,002 | INFO     | . payload setup = 7 s
[2026-02-01 06:24:18] 2026-02-01 11:23:28,002 | INFO     | . stage-in = 0 s
[2026-02-01 06:24:18] 2026-02-01 11:23:28,003 | INFO     | . payload execution = 4618 s
[2026-02-01 06:24:18] 2026-02-01 11:23:28,003 | INFO     | . stage-out = 0 s
[2026-02-01 06:24:18] 2026-02-01 11:23:28,003 | INFO     | . log creation = 0 s
[2026-02-01 06:24:18] 2026-02-01 11:23:28,003 | INFO     | ..............................
[2026-02-01 06:24:18] 2026-02-01 11:23:28,529 | INFO     | 
[2026-02-01 06:24:18] 2026-02-01 11:23:28,530 | INFO     | job summary report
[2026-02-01 06:24:18] 2026-02-01 11:23:28,530 | INFO     | --------------------------------------------------
[2026-02-01 06:24:18] 2026-02-01 11:23:28,530 | INFO     | PanDA job id: 6995417840
[2026-02-01 06:24:18] 2026-02-01 11:23:28,530 | INFO     | task id: 48317952
[2026-02-01 06:24:18] 2026-02-01 11:23:28,530 | INFO     | errors: (none)
[2026-02-01 06:24:18] 2026-02-01 11:23:28,530 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 06:24:18] 2026-02-01 11:23:28,531 | INFO     | pilot state: finished 
[2026-02-01 06:24:18] 2026-02-01 11:23:28,531 | INFO     | transexitcode: 0
[2026-02-01 06:24:18] 2026-02-01 11:23:28,531 | INFO     | exeerrorcode: 0
[2026-02-01 06:24:18] 2026-02-01 11:23:28,531 | INFO     | exeerrordiag: 
[2026-02-01 06:24:18] 2026-02-01 11:23:28,531 | INFO     | exitcode: 0
[2026-02-01 06:24:18] 2026-02-01 11:23:28,531 | INFO     | exitmsg: OK
[2026-02-01 06:24:18] 2026-02-01 11:23:28,532 | INFO     | cpuconsumptiontime: 50373 s
[2026-02-01 06:24:18] 2026-02-01 11:23:28,532 | INFO     | nevents: 400
[2026-02-01 06:24:18] 2026-02-01 11:23:28,532 | INFO     | neventsw: 0
[2026-02-01 06:24:18] 2026-02-01 11:23:28,532 | INFO     | pid: 4472
[2026-02-01 06:24:18] 2026-02-01 11:23:28,532 | INFO     | pgrp: 4472
[2026-02-01 06:24:18] 2026-02-01 11:23:28,532 | INFO     | corecount: 12
[2026-02-01 06:24:18] 2026-02-01 11:23:28,532 | INFO     | event service: False
[2026-02-01 06:24:18] 2026-02-01 11:23:28,533 | INFO     | sizes: {0: 2277839, 1: 2278300, 11: 2278300, 4629: 2304465, 4631: 2313463, 4632: 2313841}
[2026-02-01 06:24:18] 2026-02-01 11:23:28,533 | INFO     | --------------------------------------------------
[2026-02-01 06:24:18] 2026-02-01 11:23:28,533 | INFO     | 
[2026-02-01 06:24:18] 2026-02-01 11:23:28,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-01 06:24:18] 2026-02-01 11:23:28,557 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,558 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,558 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,558 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,560 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 06:24:18] 2026-02-01 11:23:28,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,560 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 06:24:18] 2026-02-01 11:23:28,561 | INFO     | job 6995417840 has completed (purged errors)
[2026-02-01 06:24:18] 2026-02-01 11:23:28,561 | INFO     | overall cleanup function is called
[2026-02-01 06:24:18] 2026-02-01 11:23:29,570 | INFO     | --- collectZombieJob: --- 10, [4472]
[2026-02-01 06:24:18] 2026-02-01 11:23:29,570 | INFO     | zombie collector waiting for pid 4472
[2026-02-01 06:24:18] 2026-02-01 11:23:29,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 06:24:18] 2026-02-01 11:23:29,570 | INFO     | collected zombie processes
[2026-02-01 06:24:18] 2026-02-01 11:23:29,570 | INFO     | will attempt to kill all subprocesses of pid=4472
[2026-02-01 06:24:18] 2026-02-01 11:23:29,661 | INFO     | process IDs to be killed: [4472] (in reverse order)
[2026-02-01 06:24:18] 2026-02-01 11:23:29,721 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 06:24:18] 2026-02-01 11:23:29,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 06:24:18] 2026-02-01 11:23:29,725 | INFO     | did not find any defunct processes belonging to 4472
[2026-02-01 06:24:18] 2026-02-01 11:23:29,729 | INFO     | did not find any defunct processes belonging to 4472
[2026-02-01 06:24:18] 2026-02-01 11:23:29,729 | INFO     | ready for new job
[2026-02-01 06:24:18] 2026-02-01 11:23:29,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 06:24:18] 2026-02-01 11:23:29,730 | INFO     | **************************************
[2026-02-01 06:24:18] 2026-02-01 11:23:29,730 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 06:24:18] 2026-02-01 11:23:29,730 | INFO     | **************************************
[2026-02-01 06:24:18] 2026-02-01 11:23:29,730 | INFO     | 
[2026-02-01 06:24:18] 2026-02-01 11:23:29,731 | INFO     | architecture information:
[2026-02-01 06:24:18] 2026-02-01 11:23:29,731 | INFO     | executing command: cat /etc/os-release
[2026-02-01 06:24:18] 2026-02-01 11:23:29,747 | INFO     | cat /etc/os-release:
[2026-02-01 06:24:18] NAME="CentOS Linux"
[2026-02-01 06:24:18] VERSION="7 (Core)"
[2026-02-01 06:24:18] ID="centos"
[2026-02-01 06:24:18] ID_LIKE="rhel fedora"
[2026-02-01 06:24:18] VERSION_ID="7"
[2026-02-01 06:24:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 06:24:18] ANSI_COLOR="0;31"
[2026-02-01 06:24:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 06:24:18] HOME_URL="https://www.centos.org/"
[2026-02-01 06:24:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 06:24:18] 
[2026-02-01 06:24:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 06:24:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 06:24:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 06:24:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 06:24:18] 
[2026-02-01 06:24:18] 2026-02-01 11:23:29,747 | INFO     | **************************************
[2026-02-01 06:24:18] 2026-02-01 11:23:29,914 | WARNING  | process 4472 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 06:24:18] 2026-02-01 11:23:29,986 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 06:24:18] 2026-02-01 11:23:30,073 | INFO     | number of running child processes to parent process 4472: 1
[2026-02-01 06:24:18] 2026-02-01 11:23:30,073 | INFO     | maximum number of monitored processes: 6
[2026-02-01 06:24:18] 2026-02-01 11:23:30,073 | INFO     | aborting job monitoring since job object (job id=6995417840) has expired
[2026-02-01 06:24:18] 2026-02-01 11:23:30,250 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-01 06:24:18] 2026-02-01 11:23:30,267 | INFO     | sufficient remaining disk space (28791799808 B)
[2026-02-01 06:24:18] 2026-02-01 11:23:30,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 06:24:18] 2026-02-01 11:23:30,267 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 06:24:18] 2026-02-01 11:23:30,268 | INFO     | update_server=False
[2026-02-01 06:24:18] 2026-02-01 11:23:30,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 06:24:18] 2026-02-01 11:23:30,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 06:24:18] 2026-02-01 11:23:30,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 06:24:18] 2026-02-01 11:23:30,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 06:24:18] 2026-02-01 11:23:30,269 | INFO     | will abort loop
[2026-02-01 06:24:18] 2026-02-01 11:23:30,691 | INFO     | all data control threads have been joined
[2026-02-01 06:24:18] 2026-02-01 11:23:30,797 | INFO     | all payload control threads have been joined
[2026-02-01 06:24:18] 2026-02-01 11:23:31,271 | INFO     | [job] job monitor thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:31,273 | INFO     | [job] retrieve thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:31,320 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:31,354 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:31,697 | INFO     | [data] control thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:31,747 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:31,755 | INFO     | all job control threads have been joined
[2026-02-01 06:24:18] 2026-02-01 11:23:31,802 | INFO     | [payload] control thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:31,883 | INFO     | [data] copytool_in thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:32,238 | INFO     | [payload] validate_post thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:32,275 | INFO     | [data] copytool_out thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:32,478 | INFO     | [job] validate thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:32,525 | INFO     | [payload] failed_post thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:32,726 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:32,760 | INFO     | [job] control thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:33,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 06:24:18] 2026-02-01 11:23:34,096 | INFO     | [job] queue monitor thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:23:34,274 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 06:24:18] 2026-02-01 11:24:00,928 | INFO     | PID=32333 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-01 06:24:18] 2026-02-01 11:24:00,929 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 06:24:18] 2026-02-01 11:24:00,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 06:24:18] 2026-02-01 11:24:00,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 06:24:18] 2026-02-01 11:24:11,700 | INFO     | [monitor] cgroup control has ended
[2026-02-01 06:24:18] 2026-02-01 11:24:12,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140277199279936)>', '<ExcThread(monitor, started 140276148451072)>']
[2026-02-01 06:24:18] 2026-02-01 11:24:12,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 06:24:18] 2026-02-01 11:24:12,985 | INFO     | [monitor] control thread has ended
[2026-02-01 06:24:18] 2026-02-01 11:24:17,719 | INFO     | all workflow threads have been joined
[2026-02-01 06:24:18] 2026-02-01 11:24:17,719 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 06:24:18] 2026-02-01 11:24:17,722 | INFO     | traces error code: 0
[2026-02-01 06:24:18] 2026-02-01 11:24:17,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 06:24:18] 2026-02-01 11:24:17,810 [wrapper] ==== pilot stdout END ====
[2026-02-01 06:24:18] 2026-02-01 11:24:17,814 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 06:24:18] 2026-02-01 11:24:17,818 [wrapper] pilotpid: 32333
[2026-02-01 06:24:18] 2026-02-01 11:24:17,822 [wrapper] Pilot exit status: 0
[2026-02-01 06:24:18] 2026-02-01 11:24:17,839 [wrapper] pandaids: 6995417840
[2026-02-01 06:24:18] 2026-02-01 11:24:17,882 [wrapper] cleanup supervisor_pilot 26484 32334
[2026-02-01 06:24:18] 2026-02-01 11:24:17,886 [wrapper] Test setup, not cleaning
[2026-02-01 06:24:18] 2026-02-01 11:24:17,890 [wrapper] apfmon messages muted
[2026-02-01 06:24:18] 2026-02-01 11:24:17,894 [wrapper] ==== wrapper stdout END ====
[2026-02-01 06:24:18] 2026-02-01 11:24:17,898 [wrapper] ==== wrapper stderr END ====
[2026-02-01 06:24:18]  *** Error codes and diagnostics ***
[2026-02-01 06:24:18]     "exeErrorCode": 0,
[2026-02-01 06:24:18]     "exeErrorDiag": "",
[2026-02-01 06:24:18]     "pilotErrorCode": 0,
[2026-02-01 06:24:18]     "pilotErrorDiag": "",
[2026-02-01 06:24:18]  *** Listing of results directory ***
[2026-02-01 06:24:18] total 671732
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas    584422 Jan 31 23:35 pilot3.tar.gz
[2026-02-01 06:24:18] -rwx------ 1 boincer umatlas     36322 Jan 31 23:35 runpilot2-wrapper.sh
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas      5111 Jan 31 23:37 queuedata.json
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas       100 Feb  1 05:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 06:24:18] -rwxr-xr-x 1 boincer umatlas      7986 Feb  1 05:05 run_atlas
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas       105 Feb  1 05:05 job.xml
[2026-02-01 06:24:18] -rw-r--r-- 2 boincer umatlas 496062875 Feb  1 05:05 EVNT.48317949._000117.pool.root.1
[2026-02-01 06:24:18] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 05:05 start_atlas.sh
[2026-02-01 06:24:18] drwxrwx--x 2 boincer umatlas      4096 Feb  1 05:05 shared
[2026-02-01 06:24:18] -rw-r--r-- 2 boincer umatlas    597762 Feb  1 05:05 input.tar.gz
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas         0 Feb  1 05:05 boinc_lockfile
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas      2522 Feb  1 05:05 pandaJob.out
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas        57 Feb  1 05:05 setup.sh.local
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas   1010520 Feb  1 05:05 agis_schedconf.cvmfs.json
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas   1511668 Feb  1 05:05 agis_ddmendpoints.agis.ALL.json
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas       434 Feb  1 05:06 workernode_map.json
[2026-02-01 06:24:18] drwx------ 5 boincer umatlas      4096 Feb  1 05:06 pilot3
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas      5953 Feb  1 06:21 init_data.xml
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas 185664242 Feb  1 06:22 HITS.48317952._006196.pool.root.1
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas      1043 Feb  1 06:23 memory_monitor_summary.json
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas    418419 Feb  1 06:23 log.48317952._006196.job.log.tgz.1
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas       530 Feb  1 06:23 boinc_task_state.xml
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas      6407 Feb  1 06:23 heartbeat.json
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas        95 Feb  1 06:24 pilot_heartbeat.json
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas        27 Feb  1 06:24 wrapper_checkpoint.txt
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas      8192 Feb  1 06:24 boinc_mmap_file
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas      5257 Feb  1 06:24 pilotlog.txt
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas    674099 Feb  1 06:24 log.48317952._006196.job.log.1
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas       357 Feb  1 06:24 output.list
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas       620 Feb  1 06:24 runtime_log
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas   1105920 Feb  1 06:24 result.tar.gz
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas      9343 Feb  1 06:24 runtime_log.err
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas       659 Feb  1 06:24 Dz1LDmcMe68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7UPKDmfgbDKo.diag
[2026-02-01 06:24:18] -rw-r--r-- 1 boincer umatlas     21287 Feb  1 06:24 stderr.txt
[2026-02-01 06:24:18] HITS file was successfully produced:
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas 185664242 Feb  1 06:22 shared/HITS.pool.root.1
[2026-02-01 06:24:18]  *** Contents of shared directory: ***
[2026-02-01 06:24:18] total 667440
[2026-02-01 06:24:18] -rw-r--r-- 2 boincer umatlas 496062875 Feb  1 05:05 ATLAS.root_0
[2026-02-01 06:24:18] -rw-r--r-- 2 boincer umatlas     15845 Feb  1 05:05 start_atlas.sh
[2026-02-01 06:24:18] -rw-r--r-- 2 boincer umatlas    597762 Feb  1 05:05 input.tar.gz
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas 185664242 Feb  1 06:22 HITS.pool.root.1
[2026-02-01 06:24:18] -rw------- 1 boincer umatlas   1105920 Feb  1 06:24 result.tar.gz
06:24:20 (28663): run_atlas exited; CPU time 50356.508249
06:24:20 (28663): called boinc_finish(0)

</stderr_txt>
]]>

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