Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:10:39 (3508750): wrapper (7.7.26015): starting
05:10:39 (3508750): wrapper: running run_atlas (--nthreads 8)
[2026-02-01 05:10:39] Arguments: --nthreads 8
[2026-02-01 05:10:39] Threads: 8
[2026-02-01 05:10:39] Checking for CVMFS
[2026-02-01 05:10:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 05:10:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 05:10:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 05:10:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 05:10:41] 2.13.3.0 17216 126257 640036 155745 3 1000 32315253 32935937 31240 16776704 0 1691131638 99.628 1680690887 50643 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-01 05:10:41] CVMFS is ok
[2026-02-01 05:10:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 05:10:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 05:10:41] Further information can be found at the LHC@home message board.
[2026-02-01 05:10:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 05:10:41] Checking for apptainer binary...
[2026-02-01 05:10:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 05:10:41] Running /usr/bin/apptainer --version
[2026-02-01 05:10:41] apptainer version 1.4.5-2.el9
[2026-02-01 05:10:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 05:10:42] c7-9-14.aglt2.org
[2026-02-01 05:10:42] apptainer works
[2026-02-01 05:10:42] Set ATHENA_PROC_NUMBER=8
[2026-02-01 05:10:42] Set ATHENA_CORE_NUMBER=8
[2026-02-01 05:10:42] Starting ATLAS job with PandaID=6995417518
[2026-02-01 05:10:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 06:20:38]  *** The last 200 lines of the pilot log: ***
[2026-02-01 06:20:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-01 06:20:38]  is_altstaged=None
[2026-02-01 06:20:38]  is_tar=False
[2026-02-01 06:20:38]  lfn=log.48317931._011345.job.log.tgz.1
[2026-02-01 06:20:38]  mtime=0
[2026-02-01 06:20:38]  protocol_id=None
[2026-02-01 06:20:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 06:20:38]  replicas=None
[2026-02-01 06:20:38]  scope=mc23_13p6TeV
[2026-02-01 06:20:38]  status=None
[2026-02-01 06:20:38]  status_code=0
[2026-02-01 06:20:38]  storage_token=
[2026-02-01 06:20:38]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6995417518/log.48317931._011345.job.log.tgz.1
[2026-02-01 06:20:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/e3/log.48317931._011345.job.log.tgz.1
[2026-02-01 06:20:38]  workdir=None
[2026-02-01 06:20:38] ]
[2026-02-01 06:20:38] 2026-02-01 11:19:43,768 | INFO     | transferring file log.48317931._011345.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6995417518/log.48317931._011345.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-01 06:20:38] 2026-02-01 11:19:43,768 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6995417518/log.48317931._011345.job.log.tgz.1 /tmp/boinchome/slots/7/log.48317931._011345.job
[2026-02-01 06:20:38] 2026-02-01 11:19:43,851 | INFO     | adding to output.list: log.48317931._011345.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/e3/log.48317931._011345.job.log.tg
[2026-02-01 06:20:38] 2026-02-01 11:19:43,852 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 06:20:38] 2026-02-01 11:19:43,852 | INFO     | summary of transferred files:
[2026-02-01 06:20:38] 2026-02-01 11:19:43,852 | INFO     |  -- lfn=log.48317931._011345.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 06:20:38] 2026-02-01 11:19:43,852 | INFO     | stage-out finished correctly
[2026-02-01 06:20:38] 2026-02-01 11:19:43,904 | INFO     | monitor loop #268: job 0:6995417518 is in state 'finished'
[2026-02-01 06:20:38] 2026-02-01 11:19:43,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-01 06:20:38] 2026-02-01 11:19:44,220 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 06:20:38] 2026-02-01 11:19:44,425 | INFO     | time since job start (4040s) is within the limit (349056.0s)
[2026-02-01 06:20:38] 2026-02-01 11:19:46,409 | INFO     | monitor loop #269: job 0:6995417518 is in state 'finished'
[2026-02-01 06:20:38] 2026-02-01 11:19:46,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-01 06:20:38] 2026-02-01 11:19:46,432 | INFO     | time since job start (4042s) is within the limit (349056.0s)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,446 | INFO     | job 6995417518 has state=finished
[2026-02-01 06:20:38] 2026-02-01 11:19:47,446 | INFO     | preparing for final server update for job 6995417518 in state='finished'
[2026-02-01 06:20:38] 2026-02-01 11:19:47,576 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,576 | INFO     | reading metadata from: /tmp/boinchome/slots/7/PanDA_Pilot-6995417518/jobReport.json
[2026-02-01 06:20:38] 2026-02-01 11:19:47,595 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/7/workernode_map.json
[2026-02-01 06:20:38] 2026-02-01 11:19:47,595 | INFO     | this job has now completed (state=finished)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,595 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,595 | INFO     | log transfer has been attempted: DONE
[2026-02-01 06:20:38] 2026-02-01 11:19:47,595 | INFO     | job 6995417518 has finished - writing final server update
[2026-02-01 06:20:38] 2026-02-01 11:19:47,595 | INFO     | total number of processed events: 400 (read)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,649 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6995417518/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,650 | INFO     | extracted standard info from prmon json
[2026-02-01 06:20:38] 2026-02-01 11:19:47,650 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 06:20:38] 2026-02-01 11:19:47,650 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 06:20:38] 2026-02-01 11:19:47,650 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 06:20:38] 2026-02-01 11:19:47,650 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 06:20:38] 2026-02-01 11:19:47,651 | INFO     | fitting pss+swap vs Time
[2026-02-01 06:20:38] 2026-02-01 11:19:47,651 | INFO     | sum of square deviations: 60482994.5
[2026-02-01 06:20:38] 2026-02-01 11:19:47,651 | INFO     | sum of deviations: -959858729.0
[2026-02-01 06:20:38] 2026-02-01 11:19:47,651 | INFO     | mean x: 1769942874.5
[2026-02-01 06:20:38] 2026-02-01 11:19:47,651 | INFO     | mean y: 2536279.9310344825
[2026-02-01 06:20:38] 2026-02-01 11:19:47,651 | INFO     | intersect: 28091342595.89769
[2026-02-01 06:20:38] 2026-02-01 11:19:47,651 | INFO     | chi2: 0.01860436943134678
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | current memory leak: -15.87 B/s (using 58 data points, chi2=0.02)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | ..............................
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | . Timing measurements:
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | . get job = 0 s
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | . initial setup = 33 s
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | . payload setup = 41 s
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | . stage-in = 0 s
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | . payload execution = 3977 s
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | . stage-out = 3 s
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | . log creation = 0 s
[2026-02-01 06:20:38] 2026-02-01 11:19:47,652 | INFO     | ..............................
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | 
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | job summary report
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | --------------------------------------------------
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | PanDA job id: 6995417518
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | task id: 48317931
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | errors: (none)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | pilot state: finished 
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | transexitcode: 0
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | exeerrorcode: 0
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | exeerrordiag: 
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | exitcode: 0
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | exitmsg: OK
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | cpuconsumptiontime: 23335 s
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | nevents: 400
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | neventsw: 0
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | pid: 3527808
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | pgrp: 3527808
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | corecount: 8
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | event service: False
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | sizes: {0: 2277125, 1: 2252347, 2: 2278271, 13: 2278271, 4022: 2304165, 4023: 2304164, 4027: 2313346, 4028: 2313402, 4031: 2313596}
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | --------------------------------------------------
[2026-02-01 06:20:38] 2026-02-01 11:19:47,788 | INFO     | 
[2026-02-01 06:20:38] 2026-02-01 11:19:47,789 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-02-01 06:20:38] 2026-02-01 11:19:47,921 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | job 6995417518 has completed (purged errors)
[2026-02-01 06:20:38] 2026-02-01 11:19:47,922 | INFO     | overall cleanup function is called
[2026-02-01 06:20:38] 2026-02-01 11:19:48,944 | INFO     | --- collectZombieJob: --- 10, [3527808]
[2026-02-01 06:20:38] 2026-02-01 11:19:48,944 | INFO     | zombie collector waiting for pid 3527808
[2026-02-01 06:20:38] 2026-02-01 11:19:48,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 06:20:38] 2026-02-01 11:19:48,945 | INFO     | collected zombie processes
[2026-02-01 06:20:38] 2026-02-01 11:19:48,945 | INFO     | will attempt to kill all subprocesses of pid=3527808
[2026-02-01 06:20:38] 2026-02-01 11:19:51,088 | INFO     | process IDs to be killed: [3527808] (in reverse order)
[2026-02-01 06:20:38] 2026-02-01 11:19:51,518 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 06:20:38] 2026-02-01 11:19:51,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 06:20:38] 2026-02-01 11:19:51,574 | INFO     | did not find any defunct processes belonging to 3527808
[2026-02-01 06:20:38] 2026-02-01 11:19:51,625 | INFO     | did not find any defunct processes belonging to 3527808
[2026-02-01 06:20:38] 2026-02-01 11:19:51,625 | INFO     | ready for new job
[2026-02-01 06:20:38] 2026-02-01 11:19:51,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 06:20:38] 2026-02-01 11:19:51,627 | INFO     | **************************************
[2026-02-01 06:20:38] 2026-02-01 11:19:51,628 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 06:20:38] 2026-02-01 11:19:51,628 | INFO     | **************************************
[2026-02-01 06:20:38] 2026-02-01 11:19:51,628 | INFO     | 
[2026-02-01 06:20:38] 2026-02-01 11:19:51,659 | INFO     | architecture information:
[2026-02-01 06:20:38] 2026-02-01 11:19:51,680 | INFO     | executing command: cat /etc/os-release
[2026-02-01 06:20:38] 2026-02-01 11:19:51,774 | INFO     | cat /etc/os-release:
[2026-02-01 06:20:38] NAME="CentOS Linux"
[2026-02-01 06:20:38] VERSION="7 (Core)"
[2026-02-01 06:20:38] ID="centos"
[2026-02-01 06:20:38] ID_LIKE="rhel fedora"
[2026-02-01 06:20:38] VERSION_ID="7"
[2026-02-01 06:20:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 06:20:38] ANSI_COLOR="0;31"
[2026-02-01 06:20:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 06:20:38] HOME_URL="https://www.centos.org/"
[2026-02-01 06:20:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 06:20:38] 
[2026-02-01 06:20:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 06:20:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 06:20:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 06:20:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 06:20:38] 
[2026-02-01 06:20:38] 2026-02-01 11:19:51,774 | INFO     | **************************************
[2026-02-01 06:20:38] 2026-02-01 11:19:52,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-02-01 06:20:38] 2026-02-01 11:19:52,334 | INFO     | sufficient remaining disk space (68375543808 B)
[2026-02-01 06:20:38] 2026-02-01 11:19:52,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 06:20:38] 2026-02-01 11:19:52,337 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 06:20:38] 2026-02-01 11:19:52,337 | INFO     | update_server=False
[2026-02-01 06:20:38] 2026-02-01 11:19:52,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 06:20:38] 2026-02-01 11:19:52,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 06:20:38] 2026-02-01 11:19:52,353 | INFO     | all job control threads have been joined
[2026-02-01 06:20:38] 2026-02-01 11:19:52,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 06:20:38] 2026-02-01 11:19:52,561 | INFO     | aborting loop
[2026-02-01 06:20:38] 2026-02-01 11:19:52,665 | INFO     | all payload control threads have been joined
[2026-02-01 06:20:38] 2026-02-01 11:19:52,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 06:20:38] 2026-02-01 11:19:53,032 | INFO     | all data control threads have been joined
[2026-02-01 06:20:38] 2026-02-01 11:19:53,343 | INFO     | [job] retrieve thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:53,367 | INFO     | [job] control thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:53,377 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:53,554 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:53,598 | INFO     | [job] job monitor thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:53,671 | INFO     | [payload] control thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:53,812 | INFO     | [job] queue monitor thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:54,037 | INFO     | [data] control thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:54,261 | INFO     | [payload] failed_post thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:54,269 | INFO     | [payload] validate_post thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:54,346 | INFO     | [data] copytool_out thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:54,418 | INFO     | [job] validate thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:54,432 | INFO     | [data] copytool_in thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:54,481 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:54,540 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:19:55,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 06:20:38] 2026-02-01 11:19:59,110 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 06:20:38] 2026-02-01 11:20:21,699 | INFO     | PID=3513645 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 06:20:38] 2026-02-01 11:20:21,699 | INFO     | .. there are 37 such processes running
[2026-02-01 06:20:38] 2026-02-01 11:20:21,700 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 06:20:38] 2026-02-01 11:20:21,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 06:20:38] 2026-02-01 11:20:21,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 06:20:38] 2026-02-01 11:20:30,650 | INFO     | [monitor] cgroup control has ended
[2026-02-01 06:20:38] 2026-02-01 11:20:31,275 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696836728640)>', '<ExcThread(monitor, started 139696319473408)>']
[2026-02-01 06:20:38] 2026-02-01 11:20:31,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 06:20:38] 2026-02-01 11:20:31,768 | INFO     | [monitor] control thread has ended
[2026-02-01 06:20:38] 2026-02-01 11:20:36,301 | INFO     | all workflow threads have been joined
[2026-02-01 06:20:38] 2026-02-01 11:20:36,301 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 06:20:38] 2026-02-01 11:20:36,302 | INFO     | traces error code: 0
[2026-02-01 06:20:38] 2026-02-01 11:20:36,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 06:20:38] 2026-02-01 11:20:36,936 [wrapper] ==== pilot stdout END ====
[2026-02-01 06:20:38] 2026-02-01 11:20:36,978 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 06:20:38] 2026-02-01 11:20:37,007 [wrapper] pilotpid: 3513645
[2026-02-01 06:20:38] 2026-02-01 11:20:37,046 [wrapper] Pilot exit status: 0
[2026-02-01 06:20:38] 2026-02-01 11:20:37,177 [wrapper] pandaids: 6995417518
[2026-02-01 06:20:38] 2026-02-01 11:20:37,391 [wrapper] cleanup supervisor_pilot 3882510 3513646
[2026-02-01 06:20:38] 2026-02-01 11:20:37,434 [wrapper] Test setup, not cleaning
[2026-02-01 06:20:38] 2026-02-01 11:20:37,478 [wrapper] apfmon messages muted
[2026-02-01 06:20:38] 2026-02-01 11:20:37,493 [wrapper] ==== wrapper stdout END ====
[2026-02-01 06:20:38] 2026-02-01 11:20:37,545 [wrapper] ==== wrapper stderr END ====
[2026-02-01 06:20:38]  *** Error codes and diagnostics ***
[2026-02-01 06:20:38]     "exeErrorCode": 0,
[2026-02-01 06:20:38]     "exeErrorDiag": "",
[2026-02-01 06:20:38]     "pilotErrorCode": 0,
[2026-02-01 06:20:38]     "pilotErrorDiag": "",
[2026-02-01 06:20:38]  *** Listing of results directory ***
[2026-02-01 06:20:38] total 669640
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas      5111 Jan 31 23:35 queuedata.json
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas    584422 Jan 31 23:35 pilot3.tar.gz
[2026-02-01 06:20:38] -rwx------. 1 boincer umatlas     36322 Jan 31 23:35 runpilot2-wrapper.sh
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas       100 Feb  1 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 06:20:38] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  1 05:10 run_atlas
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas       105 Feb  1 05:10 job.xml
[2026-02-01 06:20:38] -rw-r--r--. 2 boincer umatlas 495329370 Feb  1 05:10 EVNT.48317929._000205.pool.root.1
[2026-02-01 06:20:38] -rw-r--r--. 2 boincer umatlas     15845 Feb  1 05:10 start_atlas.sh
[2026-02-01 06:20:38] drwxrwx--x. 2 boincer umatlas      4096 Feb  1 05:10 shared
[2026-02-01 06:20:38] -rw-r--r--. 2 boincer umatlas    597761 Feb  1 05:10 input.tar.gz
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas         0 Feb  1 05:10 boinc_lockfile
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas      2513 Feb  1 05:10 pandaJob.out
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas        57 Feb  1 05:10 setup.sh.local
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas   1010520 Feb  1 05:11 agis_schedconf.cvmfs.json
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas   1511668 Feb  1 05:11 agis_ddmendpoints.agis.ALL.json
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas       431 Feb  1 05:12 workernode_map.json
[2026-02-01 06:20:38] drwx------. 5 boincer umatlas      4096 Feb  1 05:12 pilot3
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas      7171 Feb  1 06:09 init_data.xml
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas 184646223 Feb  1 06:18 HITS.48317931._011345.pool.root.1
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas       530 Feb  1 06:18 boinc_task_state.xml
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas      1034 Feb  1 06:19 memory_monitor_summary.json
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas    337235 Feb  1 06:19 log.48317931._011345.job.log.tgz.1
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas      6338 Feb  1 06:19 heartbeat.json
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas        95 Feb  1 06:20 pilot_heartbeat.json
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas        27 Feb  1 06:20 wrapper_checkpoint.txt
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas      4820 Feb  1 06:20 pilotlog.txt
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas    556139 Feb  1 06:20 log.48317931._011345.job.log.1
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas       357 Feb  1 06:20 output.list
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas       620 Feb  1 06:20 runtime_log
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas    911360 Feb  1 06:20 result.tar.gz
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas      9336 Feb  1 06:20 runtime_log.err
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas       651 Feb  1 06:20 lKwMDmQMe68n9Rq4apOajLDm4fhM0noT9bVooX4SDmD6OKDmX0eSCn.diag
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas      8192 Feb  1 06:20 boinc_mmap_file
[2026-02-01 06:20:38] -rw-r--r--. 1 boincer umatlas     21495 Feb  1 06:20 stderr.txt
[2026-02-01 06:20:38] HITS file was successfully produced:
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas 184646223 Feb  1 06:18 shared/HITS.pool.root.1
[2026-02-01 06:20:38]  *** Contents of shared directory: ***
[2026-02-01 06:20:38] total 665544
[2026-02-01 06:20:38] -rw-r--r--. 2 boincer umatlas 495329370 Feb  1 05:10 ATLAS.root_0
[2026-02-01 06:20:38] -rw-r--r--. 2 boincer umatlas     15845 Feb  1 05:10 start_atlas.sh
[2026-02-01 06:20:38] -rw-r--r--. 2 boincer umatlas    597761 Feb  1 05:10 input.tar.gz
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas 184646223 Feb  1 06:18 HITS.pool.root.1
[2026-02-01 06:20:38] -rw-------. 1 boincer umatlas    911360 Feb  1 06:20 result.tar.gz
06:20:39 (3508750): run_atlas exited; CPU time 23425.427721
06:20:39 (3508750): called boinc_finish(0)

</stderr_txt>
]]>

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