Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:27:34 (3260723): wrapper (7.7.26015): starting
17:27:34 (3260723): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 17:27:34] Arguments: --nthreads 4
[2026-02-02 17:27:34] Threads: 4
[2026-02-02 17:27:34] Checking for CVMFS
[2026-02-02 17:27:34] No cvmfs_config command found, will try listing directly
[2026-02-02 17:27:34] CVMFS is ok
[2026-02-02 17:27:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 17:27:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 17:27:34] Further information can be found at the LHC@home message board.
[2026-02-02 17:27:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 17:27:34] Checking for apptainer binary...
[2026-02-02 17:27:34] which: no apptainer in ((null))
[2026-02-02 17:27:34] apptainer is not installed, using version from CVMFS
[2026-02-02 17:27:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 17:27:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-02-02 17:27:34] apptainer works
[2026-02-02 17:27:34] Set ATHENA_PROC_NUMBER=4
[2026-02-02 17:27:34] Set ATHENA_CORE_NUMBER=4
[2026-02-02 17:27:34] Starting ATLAS job with PandaID=6995417806
[2026-02-02 17:27:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 20:56:41]  *** The last 200 lines of the pilot log: ***
[2026-02-02 20:56:41] 2026-02-02 19:39:12,366 | INFO     | 11486s have passed since pilot start - server update state is 'RUNNING'
[2026-02-02 20:56:41] 2026-02-02 19:39:13,207 | INFO     | job 6995417806 has state=finished
[2026-02-02 20:56:41] 2026-02-02 19:39:13,208 | INFO     | preparing for final server update for job 6995417806 in state='finished'
[2026-02-02 20:56:41] 2026-02-02 19:39:13,208 | INFO     | reading metadata from: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6995417806/jobReport.json
[2026-02-02 20:56:41] 2026-02-02 19:39:13,211 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot64/slots/0/workernode_map.json
[2026-02-02 20:56:41] 2026-02-02 19:39:13,211 | INFO     | this job has now completed (state=finished)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,212 | INFO     | log transfer has been attempted: DONE
[2026-02-02 20:56:41] 2026-02-02 19:39:13,212 | INFO     | job 6995417806 has finished - writing final server update
[2026-02-02 20:56:41] 2026-02-02 19:39:13,212 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_157768/.job.ad'
[2026-02-02 20:56:41] 2026-02-02 19:39:13,212 | INFO     | total number of processed events: 400 (read)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,225 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6995417806/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,226 | INFO     | extracted standard info from prmon json
[2026-02-02 20:56:41] 2026-02-02 19:39:13,226 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 20:56:41] 2026-02-02 19:39:13,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 20:56:41] 2026-02-02 19:39:13,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 20:56:41] 2026-02-02 19:39:13,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 20:56:41] 2026-02-02 19:39:13,231 | INFO     | fitting pss+swap vs Time
[2026-02-02 20:56:41] 2026-02-02 19:39:13,231 | INFO     | sum of square deviations: 2060343747.0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,232 | INFO     | sum of deviations: -50669038993.5
[2026-02-02 20:56:41] 2026-02-02 19:39:13,233 | INFO     | mean x: 1770055398.5
[2026-02-02 20:56:41] 2026-02-02 19:39:13,233 | INFO     | mean y: 2430604.8031914895
[2026-02-02 20:56:41] 2026-02-02 19:39:13,233 | INFO     | intersect: 43532548400.8467
[2026-02-02 20:56:41] 2026-02-02 19:39:13,233 | INFO     | chi2: 1.599679681558641
[2026-02-02 20:56:41] 2026-02-02 19:39:13,233 | INFO     | sum of square deviations: 1900284932.0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,235 | INFO     | sum of deviations: -48152626581.00003
[2026-02-02 20:56:41] 2026-02-02 19:39:13,235 | INFO     | mean x: 1770055246.0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,235 | INFO     | mean y: 2433002.93989071
[2026-02-02 20:56:41] 2026-02-02 19:39:13,235 | INFO     | intersect: 44855080020.81255
[2026-02-02 20:56:41] 2026-02-02 19:39:13,235 | INFO     | chi2: 1.5941217341724834
[2026-02-02 20:56:41] 2026-02-02 19:39:13,235 | INFO     | current chi2=1.5941217341724834 (change=0.34744126903844874 %)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,235 | INFO     | right removable region: 182
[2026-02-02 20:56:41] 2026-02-02 19:39:13,236 | INFO     | sum of square deviations: 1900284932.0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,237 | INFO     | sum of deviations: -74051199429.0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,237 | INFO     | mean x: 1770055551.0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,237 | INFO     | mean y: 2452547.0655737706
[2026-02-02 20:56:41] 2026-02-02 19:39:13,237 | INFO     | intersect: 68978812039.4059
[2026-02-02 20:56:41] 2026-02-02 19:39:13,238 | INFO     | chi2: 0.23754129679127323
[2026-02-02 20:56:41] 2026-02-02 19:39:13,238 | INFO     | current chi2=0.23754129679127323 (change=85.15069613437699 %)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,238 | INFO     | sum of square deviations: 1748737904.5
[2026-02-02 20:56:41] 2026-02-02 19:39:13,239 | INFO     | sum of deviations: -69544671837.49998
[2026-02-02 20:56:41] 2026-02-02 19:39:13,239 | INFO     | mean x: 1770055703.5
[2026-02-02 20:56:41] 2026-02-02 19:39:13,239 | INFO     | mean y: 2448007.286516854
[2026-02-02 20:56:41] 2026-02-02 19:39:13,239 | INFO     | intersect: 70394896593.91385
[2026-02-02 20:56:41] 2026-02-02 19:39:13,240 | INFO     | chi2: 0.23576863338624357
[2026-02-02 20:56:41] 2026-02-02 19:39:13,240 | INFO     | current chi2=0.23576863338624357 (change=0.7462548318860489 %)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,240 | INFO     | left removable region: 20
[2026-02-02 20:56:41] 2026-02-02 19:39:13,240 | INFO     | sum of square deviations: 1318277740.5
[2026-02-02 20:56:41] 2026-02-02 19:39:13,241 | INFO     | sum of deviations: -56719641895.0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,241 | INFO     | mean x: 1770055825.5
[2026-02-02 20:56:41] 2026-02-02 19:39:13,242 | INFO     | mean y: 2440687.5185185187
[2026-02-02 20:56:41] 2026-02-02 19:39:13,242 | INFO     | intersect: 76160089013.15875
[2026-02-02 20:56:41] 2026-02-02 19:39:13,242 | INFO     | chi2: 0.2198399841685472
[2026-02-02 20:56:41] 2026-02-02 19:39:13,242 | INFO     | current memory leak: -43.03 B/s (using 162 data points, chi2=0.22)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | could have reported an average CPU frequency of 2558 MHz (10 samples)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | ..............................
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | . Timing measurements:
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | . get job = 0 s
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | . initial setup = 6 s
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | . payload setup = 6 s
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | . stage-in = 0 s
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | . payload execution = 11452 s
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | . stage-out = 1 s
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | . log creation = 0 s
[2026-02-02 20:56:41] 2026-02-02 19:39:13,243 | INFO     | ..............................
[2026-02-02 20:56:41] 2026-02-02 19:39:13,340 | INFO     | 
[2026-02-02 20:56:41] 2026-02-02 19:39:13,341 | INFO     | job summary report
[2026-02-02 20:56:41] 2026-02-02 19:39:13,341 | INFO     | --------------------------------------------------
[2026-02-02 20:56:41] 2026-02-02 19:39:13,341 | INFO     | PanDA job id: 6995417806
[2026-02-02 20:56:41] 2026-02-02 19:39:13,341 | INFO     | task id: 48317952
[2026-02-02 20:56:41] 2026-02-02 19:39:13,341 | INFO     | errors: (none)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,341 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 20:56:41] 2026-02-02 19:39:13,341 | INFO     | pilot state: finished 
[2026-02-02 20:56:41] 2026-02-02 19:39:13,341 | INFO     | transexitcode: 0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | exeerrorcode: 0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | exeerrordiag: 
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | exitcode: 0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | exitmsg: OK
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | cpuconsumptiontime: 44340 s
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | nevents: 400
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | neventsw: 0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | pid: 3269899
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | pgrp: 3269899
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | corecount: 4
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | event service: False
[2026-02-02 20:56:41] 2026-02-02 19:39:13,342 | INFO     | sizes: {0: 2278019, 1: 2278281, 11: 2278309, 11463: 2307663, 11464: 2316683, 11468: 2316739, 11469: 2317061}
[2026-02-02 20:56:41] 2026-02-02 19:39:13,343 | INFO     | --------------------------------------------------
[2026-02-02 20:56:41] 2026-02-02 19:39:13,343 | INFO     | 
[2026-02-02 20:56:41] 2026-02-02 19:39:13,343 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2026-02-02 20:56:41] 2026-02-02 19:39:13,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,366 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,366 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,368 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,368 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 20:56:41] 2026-02-02 19:39:13,368 | INFO     | job 6995417806 has completed (purged errors)
[2026-02-02 20:56:41] 2026-02-02 19:39:13,368 | INFO     | overall cleanup function is called
[2026-02-02 20:56:41] 2026-02-02 19:39:14,372 | INFO     | --- collectZombieJob: --- 10, [3269899]
[2026-02-02 20:56:41] 2026-02-02 19:39:14,372 | INFO     | zombie collector waiting for pid 3269899
[2026-02-02 20:56:41] 2026-02-02 19:39:14,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 20:56:41] 2026-02-02 19:39:14,372 | INFO     | collected zombie processes
[2026-02-02 20:56:41] 2026-02-02 19:39:14,373 | INFO     | will attempt to kill all subprocesses of pid=3269899
[2026-02-02 20:56:41] 2026-02-02 19:39:14,726 | INFO     | process IDs to be killed: [3269899] (in reverse order)
[2026-02-02 20:56:41] 2026-02-02 19:39:14,844 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 20:56:41] 2026-02-02 19:39:14,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 20:56:41] 2026-02-02 19:39:14,857 | INFO     | did not find any defunct processes belonging to 3269899
[2026-02-02 20:56:41] 2026-02-02 19:39:14,868 | INFO     | did not find any defunct processes belonging to 3269899
[2026-02-02 20:56:41] 2026-02-02 19:39:14,868 | INFO     | ready for new job
[2026-02-02 20:56:41] 2026-02-02 19:39:14,869 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 20:56:41] 2026-02-02 19:39:14,871 | INFO     | **************************************
[2026-02-02 20:56:41] 2026-02-02 19:39:14,871 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 20:56:41] 2026-02-02 19:39:14,871 | INFO     | **************************************
[2026-02-02 20:56:41] 2026-02-02 19:39:14,871 | INFO     | 
[2026-02-02 20:56:41] 2026-02-02 19:39:14,875 | INFO     | architecture information:
[2026-02-02 20:56:41] 2026-02-02 19:39:14,875 | INFO     | executing command: cat /etc/os-release
[2026-02-02 20:56:41] 2026-02-02 19:39:14,891 | INFO     | cat /etc/os-release:
[2026-02-02 20:56:41] NAME="CentOS Linux"
[2026-02-02 20:56:41] VERSION="7 (Core)"
[2026-02-02 20:56:41] ID="centos"
[2026-02-02 20:56:41] ID_LIKE="rhel fedora"
[2026-02-02 20:56:41] VERSION_ID="7"
[2026-02-02 20:56:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 20:56:41] ANSI_COLOR="0;31"
[2026-02-02 20:56:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 20:56:41] HOME_URL="https://www.centos.org/"
[2026-02-02 20:56:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 20:56:41] 
[2026-02-02 20:56:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 20:56:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 20:56:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 20:56:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 20:56:41] 
[2026-02-02 20:56:41] 2026-02-02 19:39:14,892 | INFO     | **************************************
[2026-02-02 20:56:41] 2026-02-02 19:39:15,395 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2026-02-02 20:56:41] 2026-02-02 19:39:15,412 | INFO     | sufficient remaining disk space (667368292352 B)
[2026-02-02 20:56:41] 2026-02-02 19:39:15,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 20:56:41] 2026-02-02 19:39:15,413 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 20:56:41] 2026-02-02 19:39:15,413 | INFO     | update_server=False
[2026-02-02 20:56:41] 2026-02-02 19:39:15,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 20:56:41] 2026-02-02 19:39:15,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 20:56:41] 2026-02-02 19:39:15,414 | INFO     | aborting loop
[2026-02-02 20:56:41] 2026-02-02 19:39:15,550 | INFO     | all payload control threads have been joined
[2026-02-02 20:56:41] 2026-02-02 19:39:16,122 | INFO     | all data control threads have been joined
[2026-02-02 20:56:41] 2026-02-02 19:39:16,266 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 20:56:41] 2026-02-02 19:39:16,419 | INFO     | [job] retrieve thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:16,419 | INFO     | [job] job monitor thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:16,435 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:16,528 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:16,556 | INFO     | [payload] control thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:16,625 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:16,737 | INFO     | [data] copytool_in thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:16,807 | INFO     | all job control threads have been joined
[2026-02-02 20:56:41] 2026-02-02 19:39:16,890 | INFO     | [payload] failed_post thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:17,124 | INFO     | [data] control thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:17,441 | INFO     | [job] validate thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:17,645 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:17,687 | INFO     | [payload] validate_post thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:17,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 20:56:41] 2026-02-02 19:39:17,812 | INFO     | [job] control thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:18,272 | INFO     | [data] copytool_out thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:18,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 20:56:41] 2026-02-02 19:39:19,357 | INFO     | [job] queue monitor thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:21,778 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 20:56:41] 2026-02-02 19:39:45,896 | INFO     | PID=3264749 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-02 20:56:41] 2026-02-02 19:39:45,896 | INFO     | .. there are 4 such processes running
[2026-02-02 20:56:41] 2026-02-02 19:39:45,897 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 20:56:41] 2026-02-02 19:39:45,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 20:56:41] 2026-02-02 19:39:45,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 20:56:41] 2026-02-02 19:40:10,377 | INFO     | [monitor] cgroup control has ended
[2026-02-02 20:56:41] 2026-02-02 19:40:11,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23021568493376)>', '<ExcThread(monitor, started 23021317510912)>']
[2026-02-02 20:56:41] 2026-02-02 19:40:12,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 20:56:41] 2026-02-02 19:40:12,021 | INFO     | [monitor] control thread has ended
[2026-02-02 20:56:41] 2026-02-02 19:40:16,461 | INFO     | all workflow threads have been joined
[2026-02-02 20:56:41] 2026-02-02 19:40:16,461 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 20:56:41] 2026-02-02 19:40:16,461 | INFO     | traces error code: 0
[2026-02-02 20:56:41] 2026-02-02 19:40:16,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 20:56:41] 2026-02-02 19:40:16,609 [wrapper] ==== pilot stdout END ====
[2026-02-02 20:56:41] 2026-02-02 19:40:16,611 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 20:56:41] 2026-02-02 19:40:16,614 [wrapper] pilotpid: 3264749
[2026-02-02 20:56:41] 2026-02-02 19:40:16,616 [wrapper] Pilot exit status: 0
[2026-02-02 20:56:41] 2026-02-02 19:40:16,627 [wrapper] pandaids: 6995417806
[2026-02-02 20:56:41] 2026-02-02 19:40:16,709 [wrapper] cleanup supervisor_pilot 3402627 3264750
[2026-02-02 20:56:41] 2026-02-02 19:40:16,713 [wrapper] Test setup, not cleaning
[2026-02-02 20:56:41] 2026-02-02 19:40:16,715 [wrapper] apfmon messages muted
[2026-02-02 20:56:41] 2026-02-02 19:40:16,718 [wrapper] ==== wrapper stdout END ====
[2026-02-02 20:56:41] 2026-02-02 19:40:16,721 [wrapper] ==== wrapper stderr END ====
[2026-02-02 20:56:41]  *** Error codes and diagnostics ***
[2026-02-02 20:56:41]     "exeErrorCode": 0,
[2026-02-02 20:56:41]     "exeErrorDiag": "",
[2026-02-02 20:56:41]     "pilotErrorCode": 0,
[2026-02-02 20:56:41]     "pilotErrorDiag": "",
[2026-02-02 20:56:41]  *** Listing of results directory ***
[2026-02-02 20:56:41] total 672684
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc    584422 Feb  1 05:35 pilot3.tar.gz
[2026-02-02 20:56:41] -rwx------ 1 boinc boinc     36322 Feb  1 05:35 runpilot2-wrapper.sh
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc      5111 Feb  1 05:37 queuedata.json
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc       100 Feb  2 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 20:56:41] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 17:27 run_atlas
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc       105 Feb  2 17:27 job.xml
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc      6638 Feb  2 17:27 init_data.xml
[2026-02-02 20:56:41] -rw-r--r-- 2 boinc boinc 496062875 Feb  2 17:27 EVNT.48317949._000117.pool.root.1
[2026-02-02 20:56:41] -rw-r--r-- 2 boinc boinc     15845 Feb  2 17:27 start_atlas.sh
[2026-02-02 20:56:41] drwxrwx--x 2 boinc boinc      4096 Feb  2 17:27 shared
[2026-02-02 20:56:41] -rw-r--r-- 2 boinc boinc    597762 Feb  2 17:27 input.tar.gz
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc         0 Feb  2 17:27 boinc_lockfile
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc      2521 Feb  2 17:27 pandaJob.out
[2026-02-02 20:56:41] -rw------- 1 boinc boinc   1009772 Feb  2 17:27 agis_schedconf.cvmfs.json
[2026-02-02 20:56:41] -rw------- 1 boinc boinc       452 Feb  2 17:27 workernode_map.json
[2026-02-02 20:56:41] drwx------ 5 boinc boinc      4096 Feb  2 17:27 pilot3
[2026-02-02 20:56:41] -rw------- 1 boinc boinc 184858342 Feb  2 20:38 HITS.48317952._006162.pool.root.1
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc       529 Feb  2 20:38 boinc_task_state.xml
[2026-02-02 20:56:41] -rw------- 1 boinc boinc      1037 Feb  2 20:39 memory_monitor_summary.json
[2026-02-02 20:56:41] -rw------- 1 boinc boinc        95 Feb  2 20:39 pilot_heartbeat.json
[2026-02-02 20:56:41] -rw------- 1 boinc boinc   1511668 Feb  2 20:39 agis_ddmendpoints.agis.ALL.json
[2026-02-02 20:56:41] -rw------- 1 boinc boinc    358859 Feb  2 20:39 log.48317952._006162.job.log.tgz.1
[2026-02-02 20:56:41] -rw------- 1 boinc boinc      6409 Feb  2 20:39 heartbeat.json
[2026-02-02 20:56:41] -rw------- 1 boinc boinc      4829 Feb  2 20:40 pilotlog.txt
[2026-02-02 20:56:41] -rw------- 1 boinc boinc   1623332 Feb  2 20:40 log.48317952._006162.job.log.1
[2026-02-02 20:56:41] -rw------- 1 boinc boinc       357 Feb  2 20:40 output.list
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc       620 Feb  2 20:40 runtime_log
[2026-02-02 20:56:41] -rw------- 1 boinc boinc   1996800 Feb  2 20:40 result.tar.gz
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc      9205 Feb  2 20:40 runtime_log.err
[2026-02-02 20:56:41] -rw------- 1 boinc boinc       665 Feb  2 20:40 GpxKDmcMe68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmiUPKDm8EA0Ao.diag
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc        26 Feb  2 20:56 wrapper_checkpoint.txt
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc      8192 Feb  2 20:56 boinc_mmap_file
[2026-02-02 20:56:41] -rw-r--r-- 1 boinc boinc     21136 Feb  2 20:56 stderr.txt
[2026-02-02 20:56:41] HITS file was successfully produced:
[2026-02-02 20:56:41] -rw------- 1 boinc boinc 184858342 Feb  2 20:38 shared/HITS.pool.root.1
[2026-02-02 20:56:41]  *** Contents of shared directory: ***
[2026-02-02 20:56:41] total 667528
[2026-02-02 20:56:41] -rw-r--r-- 2 boinc boinc 496062875 Feb  2 17:27 ATLAS.root_0
[2026-02-02 20:56:41] -rw-r--r-- 2 boinc boinc     15845 Feb  2 17:27 start_atlas.sh
[2026-02-02 20:56:41] -rw-r--r-- 2 boinc boinc    597762 Feb  2 17:27 input.tar.gz
[2026-02-02 20:56:41] -rw------- 1 boinc boinc 184858342 Feb  2 20:38 HITS.pool.root.1
[2026-02-02 20:56:41] -rw------- 1 boinc boinc   1996800 Feb  2 20:40 result.tar.gz
20:56:43 (3260723): run_atlas exited; CPU time 44867.993004
20:56:43 (3260723): called boinc_finish(0)

</stderr_txt>
]]>

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