Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:34:43 (173668): wrapper (7.7.26015): starting
01:34:43 (173668): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 01:34:43] Arguments: --nthreads 4
[2026-02-04 01:34:43] Threads: 4
[2026-02-04 01:34:43] Checking for CVMFS
[2026-02-04 01:34:43] No cvmfs_config command found, will try listing directly
[2026-02-04 01:34:43] CVMFS is ok
[2026-02-04 01:34:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 01:34:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 01:34:43] Further information can be found at the LHC@home message board.
[2026-02-04 01:34:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 01:34:43] Checking for apptainer binary...
[2026-02-04 01:34:43] which: no apptainer in ((null))
[2026-02-04 01:34:43] apptainer is not installed, using version from CVMFS
[2026-02-04 01:34:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 01:34:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-02-04 01:34:43] apptainer works
[2026-02-04 01:34:43] Set ATHENA_PROC_NUMBER=4
[2026-02-04 01:34:43] Set ATHENA_CORE_NUMBER=4
[2026-02-04 01:34:43] Starting ATLAS job with PandaID=6995283729
[2026-02-04 01:34:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 05:42:30]  *** The last 200 lines of the pilot log: ***
[2026-02-04 05:42:30] 2026-02-04 04:41:39,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 05:42:30] 2026-02-04 04:41:39,865 | INFO     | fitting pss+swap vs Time
[2026-02-04 05:42:30] 2026-02-04 04:41:39,866 | INFO     | sum of square deviations: 4449281562.0
[2026-02-04 05:42:30] 2026-02-04 04:41:39,868 | INFO     | sum of deviations: -10721330476.000002
[2026-02-04 05:42:30] 2026-02-04 04:41:39,868 | INFO     | mean x: 1770172704.0
[2026-02-04 05:42:30] 2026-02-04 04:41:39,868 | INFO     | mean y: 2326433.362139918
[2026-02-04 05:42:30] 2026-02-04 04:41:39,869 | INFO     | intersect: 4267870498.109402
[2026-02-04 05:42:30] 2026-02-04 04:41:39,869 | INFO     | chi2: 2.136753496581478
[2026-02-04 05:42:30] 2026-02-04 04:41:39,870 | INFO     | sum of square deviations: 4180243959.5
[2026-02-04 05:42:30] 2026-02-04 04:41:39,872 | INFO     | sum of deviations: 3241785494.500006
[2026-02-04 05:42:30] 2026-02-04 04:41:39,872 | INFO     | mean x: 1770172551.5
[2026-02-04 05:42:30] 2026-02-04 04:41:39,872 | INFO     | mean y: 2334217.231092437
[2026-02-04 05:42:30] 2026-02-04 04:41:39,872 | INFO     | intersect: -1370437265.9196544
[2026-02-04 05:42:30] 2026-02-04 04:41:39,873 | INFO     | chi2: 1.481998219304602
[2026-02-04 05:42:30] 2026-02-04 04:41:39,873 | INFO     | current chi2=1.481998219304602 (change=30.642527475649274 %)
[2026-02-04 05:42:30] 2026-02-04 04:41:39,874 | INFO     | sum of square deviations: 3922276332.0
[2026-02-04 05:42:30] 2026-02-04 04:41:39,876 | INFO     | sum of deviations: 3117745258.000003
[2026-02-04 05:42:30] 2026-02-04 04:41:39,876 | INFO     | mean x: 1770172399.0
[2026-02-04 05:42:30] 2026-02-04 04:41:39,876 | INFO     | mean y: 2334143.892703863
[2026-02-04 05:42:30] 2026-02-04 04:41:39,876 | INFO     | intersect: -1404743312.07292
[2026-02-04 05:42:30] 2026-02-04 04:41:39,877 | INFO     | chi2: 1.4821068918645035
[2026-02-04 05:42:30] 2026-02-04 04:41:39,877 | INFO     | current chi2=1.4821068918645035 (change=-0.007332840113164125 %)
[2026-02-04 05:42:30] 2026-02-04 04:41:39,877 | INFO     | right removable region: 232
[2026-02-04 05:42:30] 2026-02-04 04:41:39,878 | INFO     | sum of square deviations: 4180243959.5
[2026-02-04 05:42:30] 2026-02-04 04:41:39,880 | INFO     | sum of deviations: -42675120021.5
[2026-02-04 05:42:30] 2026-02-04 04:41:39,880 | INFO     | mean x: 1770172856.5
[2026-02-04 05:42:30] 2026-02-04 04:41:39,880 | INFO     | mean y: 2344360.567226891
[2026-02-04 05:42:30] 2026-02-04 04:41:39,880 | INFO     | intersect: 18073619588.000275
[2026-02-04 05:42:30] 2026-02-04 04:41:39,881 | INFO     | chi2: 0.7782252574601412
[2026-02-04 05:42:30] 2026-02-04 04:41:39,881 | INFO     | current chi2=0.7782252574601412 (change=63.579081129142956 %)
[2026-02-04 05:42:30] 2026-02-04 04:41:39,881 | INFO     | sum of square deviations: 3922276332.0
[2026-02-04 05:42:30] 2026-02-04 04:41:39,883 | INFO     | sum of deviations: -39474147980.0
[2026-02-04 05:42:30] 2026-02-04 04:41:39,884 | INFO     | mean x: 1770173009.0
[2026-02-04 05:42:30] 2026-02-04 04:41:39,884 | INFO     | mean y: 2342451.729613734
[2026-02-04 05:42:30] 2026-02-04 04:41:39,884 | INFO     | intersect: 17817525624.15987
[2026-02-04 05:42:30] 2026-02-04 04:41:39,885 | INFO     | chi2: 0.773269361762825
[2026-02-04 05:42:30] 2026-02-04 04:41:39,885 | INFO     | current chi2=0.773269361762825 (change=0.636820207235431 %)
[2026-02-04 05:42:30] 2026-02-04 04:41:39,885 | INFO     | left removable region: 20
[2026-02-04 05:42:30] 2026-02-04 04:41:39,885 | INFO     | sum of square deviations: 2954447953.0
[2026-02-04 05:42:30] 2026-02-04 04:41:39,887 | INFO     | sum of deviations: -13735677989.0
[2026-02-04 05:42:30] 2026-02-04 04:41:39,887 | INFO     | mean x: 1770172978.5
[2026-02-04 05:42:30] 2026-02-04 04:41:39,888 | INFO     | mean y: 2343469.867924528
[2026-02-04 05:42:30] 2026-02-04 04:41:39,888 | INFO     | intersect: 8232146940.5351305
[2026-02-04 05:42:30] 2026-02-04 04:41:39,888 | INFO     | chi2: 0.07280388143829206
[2026-02-04 05:42:30] 2026-02-04 04:41:39,889 | INFO     | current memory leak: -4.65 B/s (using 212 data points, chi2=0.07)
[2026-02-04 05:42:30] 2026-02-04 04:41:39,889 | INFO     | could have reported an average CPU frequency of 2373 MHz (12 samples)
[2026-02-04 05:42:30] 2026-02-04 04:41:39,890 | INFO     | ..............................
[2026-02-04 05:42:30] 2026-02-04 04:41:39,890 | INFO     | . Timing measurements:
[2026-02-04 05:42:30] 2026-02-04 04:41:39,890 | INFO     | . get job = 0 s
[2026-02-04 05:42:30] 2026-02-04 04:41:39,890 | INFO     | . initial setup = 5 s
[2026-02-04 05:42:30] 2026-02-04 04:41:39,890 | INFO     | . payload setup = 6 s
[2026-02-04 05:42:30] 2026-02-04 04:41:39,890 | INFO     | . stage-in = 0 s
[2026-02-04 05:42:30] 2026-02-04 04:41:39,891 | INFO     | . payload execution = 14775 s
[2026-02-04 05:42:30] 2026-02-04 04:41:39,891 | INFO     | . stage-out = 1 s
[2026-02-04 05:42:30] 2026-02-04 04:41:39,891 | INFO     | . log creation = 0 s
[2026-02-04 05:42:30] 2026-02-04 04:41:39,891 | INFO     | ..............................
[2026-02-04 05:42:30] 2026-02-04 04:41:40,011 | INFO     | 
[2026-02-04 05:42:30] 2026-02-04 04:41:40,012 | INFO     | job summary report
[2026-02-04 05:42:30] 2026-02-04 04:41:40,012 | INFO     | --------------------------------------------------
[2026-02-04 05:42:30] 2026-02-04 04:41:40,012 | INFO     | PanDA job id: 6995283729
[2026-02-04 05:42:30] 2026-02-04 04:41:40,012 | INFO     | task id: 48310589
[2026-02-04 05:42:30] 2026-02-04 04:41:40,012 | INFO     | errors: (none)
[2026-02-04 05:42:30] 2026-02-04 04:41:40,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 05:42:30] 2026-02-04 04:41:40,013 | INFO     | pilot state: finished 
[2026-02-04 05:42:30] 2026-02-04 04:41:40,013 | INFO     | transexitcode: 0
[2026-02-04 05:42:30] 2026-02-04 04:41:40,013 | INFO     | exeerrorcode: 0
[2026-02-04 05:42:30] 2026-02-04 04:41:40,013 | INFO     | exeerrordiag: 
[2026-02-04 05:42:30] 2026-02-04 04:41:40,013 | INFO     | exitcode: 0
[2026-02-04 05:42:30] 2026-02-04 04:41:40,013 | INFO     | exitmsg: OK
[2026-02-04 05:42:30] 2026-02-04 04:41:40,013 | INFO     | cpuconsumptiontime: 55243 s
[2026-02-04 05:42:30] 2026-02-04 04:41:40,014 | INFO     | nevents: 400
[2026-02-04 05:42:30] 2026-02-04 04:41:40,014 | INFO     | neventsw: 0
[2026-02-04 05:42:30] 2026-02-04 04:41:40,014 | INFO     | pid: 182828
[2026-02-04 05:42:30] 2026-02-04 04:41:40,014 | INFO     | pgrp: 182828
[2026-02-04 05:42:30] 2026-02-04 04:41:40,014 | INFO     | corecount: 4
[2026-02-04 05:42:30] 2026-02-04 04:41:40,014 | INFO     | event service: False
[2026-02-04 05:42:30] 2026-02-04 04:41:40,015 | INFO     | sizes: {0: 2277801, 1: 2278318, 12: 2278318, 14785: 2309227, 14786: 2309226, 14787: 2318486, 14788: 2318624}
[2026-02-04 05:42:30] 2026-02-04 04:41:40,015 | INFO     | --------------------------------------------------
[2026-02-04 05:42:30] 2026-02-04 04:41:40,015 | INFO     | 
[2026-02-04 05:42:30] 2026-02-04 04:41:40,015 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2026-02-04 05:42:30] 2026-02-04 04:41:40,036 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,036 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,037 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,037 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,039 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 05:42:30] 2026-02-04 04:41:40,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,039 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 05:42:30] 2026-02-04 04:41:40,039 | INFO     | job 6995283729 has completed (purged errors)
[2026-02-04 05:42:30] 2026-02-04 04:41:40,040 | INFO     | overall cleanup function is called
[2026-02-04 05:42:30] 2026-02-04 04:41:40,046 | WARNING  | process 182828 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 05:42:30] 2026-02-04 04:41:40,286 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 05:42:30] 2026-02-04 04:41:40,288 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 05:42:30] 2026-02-04 04:41:40,288 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-04 05:42:30] 2026-02-04 04:41:40,288 | WARNING  | maxPSS not found in memory monitor output
[2026-02-04 05:42:30] 2026-02-04 04:41:40,581 | INFO     | number of running child processes to parent process 182828: 1
[2026-02-04 05:42:30] 2026-02-04 04:41:40,582 | INFO     | maximum number of monitored processes: 6
[2026-02-04 05:42:30] 2026-02-04 04:41:40,582 | INFO     | aborting job monitoring since job object (job id=6995283729) has expired
[2026-02-04 05:42:30] 2026-02-04 04:41:41,049 | INFO     | --- collectZombieJob: --- 10, [182828]
[2026-02-04 05:42:30] 2026-02-04 04:41:41,050 | INFO     | zombie collector waiting for pid 182828
[2026-02-04 05:42:30] 2026-02-04 04:41:41,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 05:42:30] 2026-02-04 04:41:41,050 | INFO     | collected zombie processes
[2026-02-04 05:42:30] 2026-02-04 04:41:41,050 | INFO     | will attempt to kill all subprocesses of pid=182828
[2026-02-04 05:42:30] 2026-02-04 04:41:41,355 | INFO     | process IDs to be killed: [182828] (in reverse order)
[2026-02-04 05:42:30] 2026-02-04 04:41:41,443 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 05:42:30] 2026-02-04 04:41:41,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 05:42:30] 2026-02-04 04:41:41,451 | INFO     | did not find any defunct processes belonging to 182828
[2026-02-04 05:42:30] 2026-02-04 04:41:41,457 | INFO     | did not find any defunct processes belonging to 182828
[2026-02-04 05:42:30] 2026-02-04 04:41:41,458 | INFO     | ready for new job
[2026-02-04 05:42:30] 2026-02-04 04:41:41,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 05:42:30] 2026-02-04 04:41:41,460 | INFO     | **************************************
[2026-02-04 05:42:30] 2026-02-04 04:41:41,460 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 05:42:30] 2026-02-04 04:41:41,460 | INFO     | **************************************
[2026-02-04 05:42:30] 2026-02-04 04:41:41,461 | INFO     | 
[2026-02-04 05:42:30] 2026-02-04 04:41:41,463 | INFO     | architecture information:
[2026-02-04 05:42:30] 2026-02-04 04:41:41,464 | INFO     | executing command: cat /etc/os-release
[2026-02-04 05:42:30] 2026-02-04 04:41:41,477 | INFO     | cat /etc/os-release:
[2026-02-04 05:42:30] NAME="CentOS Linux"
[2026-02-04 05:42:30] VERSION="7 (Core)"
[2026-02-04 05:42:30] ID="centos"
[2026-02-04 05:42:30] ID_LIKE="rhel fedora"
[2026-02-04 05:42:30] VERSION_ID="7"
[2026-02-04 05:42:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 05:42:30] ANSI_COLOR="0;31"
[2026-02-04 05:42:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 05:42:30] HOME_URL="https://www.centos.org/"
[2026-02-04 05:42:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 05:42:30] 
[2026-02-04 05:42:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 05:42:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 05:42:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 05:42:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 05:42:30] 
[2026-02-04 05:42:30] 2026-02-04 04:41:41,478 | INFO     | **************************************
[2026-02-04 05:42:30] 2026-02-04 04:41:41,981 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-02-04 05:42:30] 2026-02-04 04:41:41,995 | INFO     | sufficient remaining disk space (1662744788992 B)
[2026-02-04 05:42:30] 2026-02-04 04:41:41,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 05:42:30] 2026-02-04 04:41:41,996 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 05:42:30] 2026-02-04 04:41:41,996 | INFO     | update_server=False
[2026-02-04 05:42:30] 2026-02-04 04:41:41,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 05:42:30] 2026-02-04 04:41:41,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 05:42:30] 2026-02-04 04:41:41,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 05:42:30] 2026-02-04 04:41:41,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 05:42:30] 2026-02-04 04:41:41,997 | INFO     | aborting loop
[2026-02-04 05:42:30] 2026-02-04 04:41:42,047 | INFO     | all data control threads have been joined
[2026-02-04 05:42:30] 2026-02-04 04:41:42,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 05:42:30] 2026-02-04 04:41:42,606 | INFO     | job.realtimelogging is not enabled
[2026-02-04 05:42:30] 2026-02-04 04:41:42,639 | INFO     | all payload control threads have been joined
[2026-02-04 05:42:30] 2026-02-04 04:41:43,002 | INFO     | [job] retrieve thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,002 | INFO     | [job] queue monitor thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,003 | INFO     | [job] job monitor thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,004 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,017 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,052 | INFO     | [data] control thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,083 | INFO     | all job control threads have been joined
[2026-02-04 05:42:30] 2026-02-04 04:41:43,238 | INFO     | [job] validate thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,612 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,645 | INFO     | [payload] control thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,689 | INFO     | [payload] validate_post thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,784 | INFO     | [payload] failed_post thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:43,984 | INFO     | [data] copytool_in thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:44,088 | INFO     | [job] control thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:44,325 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:44,488 | INFO     | [data] copytool_out thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:41:46,003 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 05:42:30] 2026-02-04 04:42:12,693 | INFO     | PID=177646 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 05:42:30] 2026-02-04 04:42:12,693 | INFO     | .. there are 6 such processes running
[2026-02-04 05:42:30] 2026-02-04 04:42:12,693 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 05:42:30] 2026-02-04 04:42:12,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 05:42:30] 2026-02-04 04:42:12,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 05:42:30] 2026-02-04 04:42:24,558 | INFO     | [monitor] cgroup control has ended
[2026-02-04 05:42:30] 2026-02-04 04:42:25,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22487749777216)>', '<ExcThread(monitor, started 22487171589888)>']
[2026-02-04 05:42:30] 2026-02-04 04:42:25,754 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 05:42:30] 2026-02-04 04:42:25,755 | INFO     | [monitor] control thread has ended
[2026-02-04 05:42:30] 2026-02-04 04:42:30,337 | INFO     | all workflow threads have been joined
[2026-02-04 05:42:30] 2026-02-04 04:42:30,338 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 05:42:30] 2026-02-04 04:42:30,338 | INFO     | traces error code: 0
[2026-02-04 05:42:30] 2026-02-04 04:42:30,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 05:42:30] 2026-02-04 04:42:30,468 [wrapper] ==== pilot stdout END ====
[2026-02-04 05:42:30] 2026-02-04 04:42:30,470 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 05:42:30] 2026-02-04 04:42:30,472 [wrapper] pilotpid: 177646
[2026-02-04 05:42:30] 2026-02-04 04:42:30,474 [wrapper] Pilot exit status: 0
[2026-02-04 05:42:30] 2026-02-04 04:42:30,482 [wrapper] pandaids: 6995283729
[2026-02-04 05:42:30] 2026-02-04 04:42:30,527 [wrapper] cleanup supervisor_pilot  349550 177647
[2026-02-04 05:42:30] 2026-02-04 04:42:30,530 [wrapper] Test setup, not cleaning
[2026-02-04 05:42:30] 2026-02-04 04:42:30,532 [wrapper] apfmon messages muted
[2026-02-04 05:42:30] 2026-02-04 04:42:30,533 [wrapper] ==== wrapper stdout END ====
[2026-02-04 05:42:30] 2026-02-04 04:42:30,535 [wrapper] ==== wrapper stderr END ====
[2026-02-04 05:42:30]  *** Error codes and diagnostics ***
[2026-02-04 05:42:30]     "exeErrorCode": 0,
[2026-02-04 05:42:30]     "exeErrorDiag": "",
[2026-02-04 05:42:30]     "pilotErrorCode": 0,
[2026-02-04 05:42:30]     "pilotErrorDiag": "",
[2026-02-04 05:42:30]  *** Listing of results directory ***
[2026-02-04 05:42:30] total 668052
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc    584422 Feb  1 03:40 pilot3.tar.gz
[2026-02-04 05:42:30] -rwx------ 1 boinc boinc     36322 Feb  1 03:43 runpilot2-wrapper.sh
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc      5111 Feb  1 03:47 queuedata.json
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc       100 Feb  4 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 05:42:30] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 00:24 run_atlas
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc       105 Feb  4 00:24 job.xml
[2026-02-04 05:42:30] -rw-r--r-- 2 boinc boinc 494656421 Feb  4 01:34 EVNT.48310585._000182.pool.root.1
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc      6421 Feb  4 01:34 init_data.xml
[2026-02-04 05:42:30] drwxrwx--x 2 boinc boinc      4096 Feb  4 01:34 shared
[2026-02-04 05:42:30] -rw-r--r-- 2 boinc boinc    597760 Feb  4 01:34 input.tar.gz
[2026-02-04 05:42:30] -rw-r--r-- 2 boinc boinc     15845 Feb  4 01:34 start_atlas.sh
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc         0 Feb  4 01:34 boinc_lockfile
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc      2529 Feb  4 01:34 pandaJob.out
[2026-02-04 05:42:30] -rw------- 1 boinc boinc   1009228 Feb  4 01:34 agis_schedconf.cvmfs.json
[2026-02-04 05:42:30] -rw------- 1 boinc boinc       447 Feb  4 01:34 workernode_map.json
[2026-02-04 05:42:30] drwx------ 5 boinc boinc      4096 Feb  4 01:35 pilot3
[2026-02-04 05:42:30] -rw------- 1 boinc boinc 180441273 Feb  4 05:40 HITS.48310589._009605.pool.root.1
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc       531 Feb  4 05:41 boinc_task_state.xml
[2026-02-04 05:42:30] -rw------- 1 boinc boinc        95 Feb  4 05:41 pilot_heartbeat.json
[2026-02-04 05:42:30] -rw------- 1 boinc boinc      1038 Feb  4 05:41 memory_monitor_summary.json
[2026-02-04 05:42:30] -rw------- 1 boinc boinc   1511668 Feb  4 05:41 agis_ddmendpoints.agis.ALL.json
[2026-02-04 05:42:30] -rw------- 1 boinc boinc    446437 Feb  4 05:41 log.48310589._009605.job.log.tgz.1
[2026-02-04 05:42:30] -rw------- 1 boinc boinc      6405 Feb  4 05:41 heartbeat.json
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc        28 Feb  4 05:42 wrapper_checkpoint.txt
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc      8192 Feb  4 05:42 boinc_mmap_file
[2026-02-04 05:42:30] -rw------- 1 boinc boinc      4901 Feb  4 05:42 pilotlog.txt
[2026-02-04 05:42:30] -rw------- 1 boinc boinc   2080504 Feb  4 05:42 log.48310589._009605.job.log.1
[2026-02-04 05:42:30] -rw------- 1 boinc boinc       357 Feb  4 05:42 output.list
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc       620 Feb  4 05:42 runtime_log
[2026-02-04 05:42:30] -rw------- 1 boinc boinc   2539520 Feb  4 05:42 result.tar.gz
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc      9205 Feb  4 05:42 runtime_log.err
[2026-02-04 05:42:30] -rw------- 1 boinc boinc       665 Feb  4 05:42 OkmKDm2bc68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKMPKDm3Kj8Mn.diag
[2026-02-04 05:42:30] -rw-r--r-- 1 boinc boinc     20934 Feb  4 05:42 stderr.txt
[2026-02-04 05:42:30] HITS file was successfully produced:
[2026-02-04 05:42:30] -rw------- 1 boinc boinc 180441273 Feb  4 05:40 shared/HITS.pool.root.1
[2026-02-04 05:42:30]  *** Contents of shared directory: ***
[2026-02-04 05:42:30] total 662368
[2026-02-04 05:42:30] -rw-r--r-- 2 boinc boinc 494656421 Feb  4 01:34 ATLAS.root_0
[2026-02-04 05:42:30] -rw-r--r-- 2 boinc boinc    597760 Feb  4 01:34 input.tar.gz
[2026-02-04 05:42:30] -rw-r--r-- 2 boinc boinc     15845 Feb  4 01:34 start_atlas.sh
[2026-02-04 05:42:30] -rw------- 1 boinc boinc 180441273 Feb  4 05:40 HITS.pool.root.1
[2026-02-04 05:42:30] -rw------- 1 boinc boinc   2539520 Feb  4 05:42 result.tar.gz
05:42:32 (173668): run_atlas exited; CPU time 55756.938578
05:42:32 (173668): called boinc_finish(0)

</stderr_txt>
]]>

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