Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:39:09 (3273675): wrapper (7.7.26015): starting
21:39:09 (3273675): wrapper: running run_atlas (--nthreads 3)
[2026-02-01 21:39:09] Arguments: --nthreads 3
[2026-02-01 21:39:09] Threads: 3
[2026-02-01 21:39:09] Checking for CVMFS
[2026-02-01 21:39:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 21:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 21:39:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 21:39:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 21:39:10] 2.9.2.0 2679616 4178 70248 155762 1 49 18728498 36864001 0 130560 0 1688258 99.984 146738 18569 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 21:39:10] CVMFS is ok
[2026-02-01 21:39:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 21:39:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 21:39:10] Further information can be found at the LHC@home message board.
[2026-02-01 21:39:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 21:39:10] Checking for apptainer binary...
[2026-02-01 21:39:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 21:39:10] Running /usr/bin/apptainer --version
[2026-02-01 21:39:10] apptainer version 1.4.1-1.1
[2026-02-01 21:39:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 21:39:10] magicA244b
[2026-02-01 21:39:10] apptainer works
[2026-02-01 21:39:10] Set ATHENA_PROC_NUMBER=3
[2026-02-01 21:39:10] Set ATHENA_CORE_NUMBER=3
[2026-02-01 21:39:10] Starting ATLAS job with PandaID=6995283725
[2026-02-01 21:39:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 23:01:59]  *** The last 200 lines of the pilot log: ***
[2026-02-01 23:01:59] 2026-02-01 22:01:28,309 | INFO     | cat /etc/os-release:
[2026-02-01 23:01:59] NAME="CentOS Linux"
[2026-02-01 23:01:59] VERSION="7 (Core)"
[2026-02-01 23:01:59] ID="centos"
[2026-02-01 23:01:59] ID_LIKE="rhel fedora"
[2026-02-01 23:01:59] VERSION_ID="7"
[2026-02-01 23:01:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 23:01:59] ANSI_COLOR="0;31"
[2026-02-01 23:01:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 23:01:59] HOME_URL="https://www.centos.org/"
[2026-02-01 23:01:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 23:01:59] 
[2026-02-01 23:01:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 23:01:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 23:01:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 23:01:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 23:01:59] 
[2026-02-01 23:01:59] 2026-02-01 22:01:28,309 | INFO     | **************************************
[2026-02-01 23:01:59] 2026-02-01 22:01:28,463 | WARNING  | process 3282159 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 23:01:59] 2026-02-01 22:01:28,489 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 23:01:59] 2026-02-01 22:01:28,520 | INFO     | number of running child processes to parent process 3282159: 1
[2026-02-01 23:01:59] 2026-02-01 22:01:28,520 | INFO     | maximum number of monitored processes: 6
[2026-02-01 23:01:59] 2026-02-01 22:01:28,520 | INFO     | aborting job monitoring since job object (job id=6995283725) has expired
[2026-02-01 23:01:59] 2026-02-01 22:01:28,813 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 23:01:59] 2026-02-01 22:01:28,826 | INFO     | sufficient remaining disk space (338302074880 B)
[2026-02-01 23:01:59] 2026-02-01 22:01:28,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 23:01:59] 2026-02-01 22:01:28,826 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 23:01:59] 2026-02-01 22:01:28,826 | INFO     | update_server=False
[2026-02-01 23:01:59] 2026-02-01 22:01:28,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 23:01:59] 2026-02-01 22:01:28,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 23:01:59] 2026-02-01 22:01:28,827 | INFO     | will abort loop
[2026-02-01 23:01:59] 2026-02-01 22:01:28,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 23:01:59] 2026-02-01 22:01:28,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 23:01:59] 2026-02-01 22:01:29,260 | INFO     | all data control threads have been joined
[2026-02-01 23:01:59] 2026-02-01 22:01:29,710 | INFO     | all payload control threads have been joined
[2026-02-01 23:01:59] 2026-02-01 22:01:29,832 | INFO     | [job] retrieve thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:29,833 | INFO     | [job] job monitor thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:29,834 | INFO     | [job] queue monitor thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:29,870 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:29,892 | INFO     | all job control threads have been joined
[2026-02-01 23:01:59] 2026-02-01 22:01:29,998 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:29,999 | INFO     | [job] validate thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:30,052 | INFO     | [payload] failed_post thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:30,089 | INFO     | [data] copytool_in thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:30,118 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:30,266 | INFO     | [data] control thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:30,596 | INFO     | [payload] validate_post thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:30,716 | INFO     | [payload] control thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:30,898 | INFO     | [job] control thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:31,004 | INFO     | [data] copytool_out thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:31,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 23:01:59] 2026-02-01 22:01:33,574 | INFO     | [monitor] cgroup control has ended
[2026-02-01 23:01:59] 2026-02-01 22:01:35,617 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:39,635 | INFO     | job.realtimelogging is not enabled
[2026-02-01 23:01:59] 2026-02-01 22:01:40,642 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 23:01:59] 2026-02-01 22:01:41,076 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753090819904)>', '<ExcThread(monitor, started 139752464447232)>']
[2026-02-01 23:01:59] 2026-02-01 22:01:46,102 | INFO     | all workflow threads have been joined
[2026-02-01 23:01:59] 2026-02-01 22:01:46,103 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 23:01:59] 2026-02-01 22:01:46,103 | INFO     | traces error code: 0
[2026-02-01 23:01:59] 2026-02-01 22:01:46,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 23:01:59] 2026-02-01 22:01:59,758 | INFO     | PID=3277728 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 23:01:59] 2026-02-01 22:01:59,759 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 23:01:59] 2026-02-01 22:01:59,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 23:01:59] 2026-02-01 22:01:59,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 23:01:59] 2026-02-01 22:01:59,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 23:01:59] 2026-02-01 22:01:59,759 | INFO     | [monitor] control thread has ended
[2026-02-01 23:01:59] 2026-02-01 22:01:59,802 [wrapper] ==== pilot stdout END ====
[2026-02-01 23:01:59] 2026-02-01 22:01:59,805 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 23:01:59] 2026-02-01 22:01:59,807 [wrapper] pilotpid: 3277728
[2026-02-01 23:01:59] 2026-02-01 22:01:59,810 [wrapper] Pilot exit status: 0
[2026-02-01 23:01:59] 2026-02-01 22:01:59,817 [wrapper] pandaids: 6995283725
[2026-02-01 23:01:59] 2026-02-01 22:01:59,832 [wrapper] cleanup supervisor_pilot 3287375 3277729
[2026-02-01 23:01:59] 2026-02-01 22:01:59,835 [wrapper] Test setup, not cleaning
[2026-02-01 23:01:59] 2026-02-01 22:01:59,837 [wrapper] apfmon messages muted
[2026-02-01 23:01:59] 2026-02-01 22:01:59,840 [wrapper] ==== wrapper stdout END ====
[2026-02-01 23:01:59] 2026-02-01 22:01:59,842 [wrapper] ==== wrapper stderr END ====
[2026-02-01 23:01:59]  *** Error codes and diagnostics ***
[2026-02-01 23:01:59]     "exeErrorCode": 0,
[2026-02-01 23:01:59]     "exeErrorDiag": "",
[2026-02-01 23:01:59]     "pilotErrorCode": 0,
[2026-02-01 23:01:59]     "pilotErrorDiag": "",
[2026-02-01 23:01:59]  *** Listing of results directory ***
[2026-02-01 23:01:59] total 663860
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc    584422 Feb  1 03:40 pilot3.tar.gz
[2026-02-01 23:01:59] -rwx------ 1 boinc boinc     36322 Feb  1 03:43 runpilot2-wrapper.sh
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc      5111 Feb  1 03:47 queuedata.json
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc       100 Feb  1 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 23:01:59] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 21:39 run_atlas
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc       105 Feb  1 21:39 job.xml
[2026-02-01 23:01:59] -rw-r--r-- 2 boinc boinc 494656421 Feb  1 21:39 EVNT.48310585._000182.pool.root.1
[2026-02-01 23:01:59] -rw-r--r-- 2 boinc boinc    597758 Feb  1 21:39 input.tar.gz
[2026-02-01 23:01:59] -rw-r--r-- 2 boinc boinc     15845 Feb  1 21:39 start_atlas.sh
[2026-02-01 23:01:59] drwxrwx--x 2 boinc boinc      4096 Feb  1 21:39 shared
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc         0 Feb  1 21:39 boinc_setup_complete
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc      6199 Feb  1 21:39 init_data.xml
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc         0 Feb  1 21:39 boinc_lockfile
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc      2529 Feb  1 21:39 pandaJob.out
[2026-02-01 23:01:59] -rw------- 1 boinc boinc   1009757 Feb  1 21:39 agis_schedconf.cvmfs.json
[2026-02-01 23:01:59] -rw------- 1 boinc boinc   1511668 Feb  1 21:39 agis_ddmendpoints.agis.ALL.json
[2026-02-01 23:01:59] -rw------- 1 boinc boinc       430 Feb  1 21:39 workernode_map.json
[2026-02-01 23:01:59] drwx------ 5 boinc boinc      4096 Feb  1 21:39 pilot3
[2026-02-01 23:01:59] -rw------- 1 boinc boinc 179197111 Feb  1 23:01 HITS.48310589._009601.pool.root.1
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc       530 Feb  1 23:01 boinc_task_state.xml
[2026-02-01 23:01:59] -rw------- 1 boinc boinc      1021 Feb  1 23:01 memory_monitor_summary.json
[2026-02-01 23:01:59] -rw------- 1 boinc boinc    285847 Feb  1 23:01 log.48310589._009601.job.log.tgz.1
[2026-02-01 23:01:59] -rw------- 1 boinc boinc      6323 Feb  1 23:01 heartbeat.json
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc      8192 Feb  1 23:01 boinc_mmap_file
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc        27 Feb  1 23:01 wrapper_checkpoint.txt
[2026-02-01 23:01:59] -rw------- 1 boinc boinc       747 Feb  1 23:01 pilotlog.txt
[2026-02-01 23:01:59] -rw------- 1 boinc boinc        95 Feb  1 23:01 pilot_heartbeat.json
[2026-02-01 23:01:59] -rw------- 1 boinc boinc    721854 Feb  1 23:01 log.48310589._009601.job.log.1
[2026-02-01 23:01:59] -rw------- 1 boinc boinc       357 Feb  1 23:01 output.list
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc       620 Feb  1 23:01 runtime_log
[2026-02-01 23:01:59] -rw------- 1 boinc boinc   1024000 Feb  1 23:01 result.tar.gz
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc      8916 Feb  1 23:01 runtime_log.err
[2026-02-01 23:01:59] -rw------- 1 boinc boinc       661 Feb  1 23:01 RXlKDm2bc68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJMPKDmXDt1Do.diag
[2026-02-01 23:01:59] -rw-r--r-- 1 boinc boinc      9519 Feb  1 23:01 stderr.txt
[2026-02-01 23:01:59] HITS file was successfully produced:
[2026-02-01 23:01:59] -rw------- 1 boinc boinc 179197111 Feb  1 23:01 shared/HITS.pool.root.1
[2026-02-01 23:01:59]  *** Contents of shared directory: ***
[2026-02-01 23:01:59] total 659672
[2026-02-01 23:01:59] -rw-r--r-- 2 boinc boinc 494656421 Feb  1 21:39 ATLAS.root_0
[2026-02-01 23:01:59] -rw-r--r-- 2 boinc boinc    597758 Feb  1 21:39 input.tar.gz
[2026-02-01 23:01:59] -rw-r--r-- 2 boinc boinc     15845 Feb  1 21:39 start_atlas.sh
[2026-02-01 23:01:59] -rw------- 1 boinc boinc 179197111 Feb  1 23:01 HITS.pool.root.1
[2026-02-01 23:01:59] -rw------- 1 boinc boinc   1024000 Feb  1 23:01 result.tar.gz
23:02:01 (3273675): run_atlas exited; CPU time 14099.091441
23:02:01 (3273675): called boinc_finish(0)

</stderr_txt>
]]>

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