Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:55 (2642792): wrapper (7.7.26015): starting
09:35:55 (2642792): wrapper: running run_atlas (--nthreads 4)
[2026-02-01 09:35:55] Arguments: --nthreads 4
[2026-02-01 09:35:55] Threads: 4
[2026-02-01 09:35:55] Checking for CVMFS
[2026-02-01 09:35:55] No cvmfs_config command found, will try listing directly
[2026-02-01 09:35:55] CVMFS is ok
[2026-02-01 09:35:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 09:35:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 09:35:55] Further information can be found at the LHC@home message board.
[2026-02-01 09:35:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 09:35:55] Checking for apptainer binary...
[2026-02-01 09:35:55] which: no apptainer in ((null))
[2026-02-01 09:35:55] apptainer is not installed, using version from CVMFS
[2026-02-01 09:35:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 09:35:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-02-01 09:35:55] apptainer works
[2026-02-01 09:35:55] Set ATHENA_PROC_NUMBER=4
[2026-02-01 09:35:55] Set ATHENA_CORE_NUMBER=4
[2026-02-01 09:35:55] Starting ATLAS job with PandaID=6991270947
[2026-02-01 09:35:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 13:08:58]  *** The last 200 lines of the pilot log: ***
[2026-02-01 13:08:58] 2026-02-01 11:47:53,337 | INFO     | reading metadata from: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6991270947/jobReport.json
[2026-02-01 13:08:58] 2026-02-01 11:47:53,339 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot44/slots/0/workernode_map.json
[2026-02-01 13:08:58] 2026-02-01 11:47:53,340 | INFO     | this job has now completed (state=finished)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,340 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,340 | INFO     | log transfer has been attempted: DONE
[2026-02-01 13:08:58] 2026-02-01 11:47:53,340 | INFO     | job 6991270947 has finished - writing final server update
[2026-02-01 13:08:58] 2026-02-01 11:47:53,340 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2234931/.job.ad'
[2026-02-01 13:08:58] 2026-02-01 11:47:53,340 | INFO     | total number of processed events: 400 (read)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,353 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6991270947/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,353 | INFO     | extracted standard info from prmon json
[2026-02-01 13:08:58] 2026-02-01 11:47:53,354 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 13:08:58] 2026-02-01 11:47:53,354 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 13:08:58] 2026-02-01 11:47:53,354 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 13:08:58] 2026-02-01 11:47:53,354 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 13:08:58] 2026-02-01 11:47:53,358 | INFO     | fitting pss+swap vs Time
[2026-02-01 13:08:58] 2026-02-01 11:47:53,358 | INFO     | sum of square deviations: 2060343747.0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,359 | INFO     | sum of deviations: 6904178951.500002
[2026-02-01 13:08:58] 2026-02-01 11:47:53,359 | INFO     | mean x: 1769940699.5
[2026-02-01 13:08:58] 2026-02-01 11:47:53,360 | INFO     | mean y: 2322839.2819148935
[2026-02-01 13:08:58] 2026-02-01 11:47:53,360 | INFO     | intersect: -5928720143.562196
[2026-02-01 13:08:58] 2026-02-01 11:47:53,360 | INFO     | chi2: 1.3856054688791688
[2026-02-01 13:08:58] 2026-02-01 11:47:53,360 | INFO     | sum of square deviations: 1900284932.0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,361 | INFO     | sum of deviations: 6711938823.999999
[2026-02-01 13:08:58] 2026-02-01 11:47:53,362 | INFO     | mean x: 1769940547.0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,362 | INFO     | mean y: 2322655.4972677594
[2026-02-01 13:08:58] 2026-02-01 11:47:53,362 | INFO     | intersect: -6249230716.068957
[2026-02-01 13:08:58] 2026-02-01 11:47:53,362 | INFO     | chi2: 1.3862338127336216
[2026-02-01 13:08:58] 2026-02-01 11:47:53,362 | INFO     | current chi2=1.3862338127336216 (change=-0.04534796293500747 %)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,362 | INFO     | right removable region: 182
[2026-02-01 13:08:58] 2026-02-01 11:47:53,363 | INFO     | sum of square deviations: 1900284932.0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,364 | INFO     | sum of deviations: -16375331111.0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,364 | INFO     | mean x: 1769940852.0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,364 | INFO     | mean y: 2344693.841530055
[2026-02-01 13:08:58] 2026-02-01 11:47:53,364 | INFO     | intersect: 15254461368.724182
[2026-02-01 13:08:58] 2026-02-01 11:47:53,364 | INFO     | chi2: 0.049445366191370806
[2026-02-01 13:08:58] 2026-02-01 11:47:53,364 | INFO     | current chi2=0.049445366191370806 (change=96.4314974715445 %)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,365 | INFO     | sum of square deviations: 1748737904.5
[2026-02-01 13:08:58] 2026-02-01 11:47:53,366 | INFO     | sum of deviations: -14509126177.500004
[2026-02-01 13:08:58] 2026-02-01 11:47:53,366 | INFO     | mean x: 1769941004.5
[2026-02-01 13:08:58] 2026-02-01 11:47:53,366 | INFO     | mean y: 2342811.9269662923
[2026-02-01 13:08:58] 2026-02-01 11:47:53,366 | INFO     | intersect: 14687389264.536528
[2026-02-01 13:08:58] 2026-02-01 11:47:53,366 | INFO     | chi2: 0.048994244911899625
[2026-02-01 13:08:58] 2026-02-01 11:47:53,367 | INFO     | current chi2=0.048994244911899625 (change=0.9123631074450627 %)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,367 | INFO     | left removable region: 20
[2026-02-01 13:08:58] 2026-02-01 11:47:53,367 | INFO     | sum of square deviations: 1318277740.5
[2026-02-01 13:08:58] 2026-02-01 11:47:53,368 | INFO     | sum of deviations: -8819718733.000002
[2026-02-01 13:08:58] 2026-02-01 11:47:53,368 | INFO     | mean x: 1769941126.5
[2026-02-01 13:08:58] 2026-02-01 11:47:53,368 | INFO     | mean y: 2337036.172839506
[2026-02-01 13:08:58] 2026-02-01 11:47:53,368 | INFO     | intersect: 11843834795.043005
[2026-02-01 13:08:58] 2026-02-01 11:47:53,369 | INFO     | chi2: 0.0406498786549795
[2026-02-01 13:08:58] 2026-02-01 11:47:53,369 | INFO     | current memory leak: -6.69 B/s (using 162 data points, chi2=0.04)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,369 | INFO     | could have reported an average CPU frequency of 2581 MHz (10 samples)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,369 | INFO     | ..............................
[2026-02-01 13:08:58] 2026-02-01 11:47:53,369 | INFO     | . Timing measurements:
[2026-02-01 13:08:58] 2026-02-01 11:47:53,370 | INFO     | . get job = 0 s
[2026-02-01 13:08:58] 2026-02-01 11:47:53,370 | INFO     | . initial setup = 6 s
[2026-02-01 13:08:58] 2026-02-01 11:47:53,370 | INFO     | . payload setup = 6 s
[2026-02-01 13:08:58] 2026-02-01 11:47:53,370 | INFO     | . stage-in = 0 s
[2026-02-01 13:08:58] 2026-02-01 11:47:53,370 | INFO     | . payload execution = 11472 s
[2026-02-01 13:08:58] 2026-02-01 11:47:53,370 | INFO     | . stage-out = 1 s
[2026-02-01 13:08:58] 2026-02-01 11:47:53,370 | INFO     | . log creation = 0 s
[2026-02-01 13:08:58] 2026-02-01 11:47:53,370 | INFO     | ..............................
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | 
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | job summary report
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | --------------------------------------------------
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | PanDA job id: 6991270947
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | task id: 48318034
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | errors: (none)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | pilot state: finished 
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | transexitcode: 0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | exeerrorcode: 0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | exeerrordiag: 
[2026-02-01 13:08:58] 2026-02-01 11:47:53,795 | INFO     | exitcode: 0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | exitmsg: OK
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | cpuconsumptiontime: 44028 s
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | nevents: 400
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | neventsw: 0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | pid: 2668518
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | pgrp: 2668518
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | corecount: 4
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | event service: False
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | sizes: {0: 2278039, 1: 2278245, 11: 2278273, 11483: 2307539, 11485: 2316559, 11488: 2316615, 11490: 2316937}
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | --------------------------------------------------
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | 
[2026-02-01 13:08:58] 2026-02-01 11:47:53,796 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-02-01 13:08:58] 2026-02-01 11:47:53,814 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,814 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,814 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,814 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | job 6991270947 has completed (purged errors)
[2026-02-01 13:08:58] 2026-02-01 11:47:53,815 | INFO     | overall cleanup function is called
[2026-02-01 13:08:58] 2026-02-01 11:47:54,822 | INFO     | --- collectZombieJob: --- 10, [2668518]
[2026-02-01 13:08:58] 2026-02-01 11:47:54,822 | INFO     | zombie collector waiting for pid 2668518
[2026-02-01 13:08:58] 2026-02-01 11:47:54,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 13:08:58] 2026-02-01 11:47:54,822 | INFO     | collected zombie processes
[2026-02-01 13:08:58] 2026-02-01 11:47:54,822 | INFO     | will attempt to kill all subprocesses of pid=2668518
[2026-02-01 13:08:58] 2026-02-01 11:47:55,214 | INFO     | process IDs to be killed: [2668518] (in reverse order)
[2026-02-01 13:08:58] 2026-02-01 11:47:55,332 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 13:08:58] 2026-02-01 11:47:55,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 13:08:58] 2026-02-01 11:47:55,345 | INFO     | did not find any defunct processes belonging to 2668518
[2026-02-01 13:08:58] 2026-02-01 11:47:55,358 | INFO     | did not find any defunct processes belonging to 2668518
[2026-02-01 13:08:58] 2026-02-01 11:47:55,359 | INFO     | ready for new job
[2026-02-01 13:08:58] 2026-02-01 11:47:55,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 13:08:58] 2026-02-01 11:47:55,361 | INFO     | **************************************
[2026-02-01 13:08:58] 2026-02-01 11:47:55,361 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 13:08:58] 2026-02-01 11:47:55,361 | INFO     | **************************************
[2026-02-01 13:08:58] 2026-02-01 11:47:55,361 | INFO     | 
[2026-02-01 13:08:58] 2026-02-01 11:47:55,365 | INFO     | architecture information:
[2026-02-01 13:08:58] 2026-02-01 11:47:55,365 | INFO     | executing command: cat /etc/os-release
[2026-02-01 13:08:58] 2026-02-01 11:47:55,382 | INFO     | cat /etc/os-release:
[2026-02-01 13:08:58] NAME="CentOS Linux"
[2026-02-01 13:08:58] VERSION="7 (Core)"
[2026-02-01 13:08:58] ID="centos"
[2026-02-01 13:08:58] ID_LIKE="rhel fedora"
[2026-02-01 13:08:58] VERSION_ID="7"
[2026-02-01 13:08:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 13:08:58] ANSI_COLOR="0;31"
[2026-02-01 13:08:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 13:08:58] HOME_URL="https://www.centos.org/"
[2026-02-01 13:08:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 13:08:58] 
[2026-02-01 13:08:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 13:08:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 13:08:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 13:08:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 13:08:58] 
[2026-02-01 13:08:58] 2026-02-01 11:47:55,382 | INFO     | **************************************
[2026-02-01 13:08:58] 2026-02-01 11:47:55,885 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-02-01 13:08:58] 2026-02-01 11:47:55,902 | INFO     | sufficient remaining disk space (650238754816 B)
[2026-02-01 13:08:58] 2026-02-01 11:47:55,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 13:08:58] 2026-02-01 11:47:55,903 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 13:08:58] 2026-02-01 11:47:55,903 | INFO     | update_server=False
[2026-02-01 13:08:58] 2026-02-01 11:47:55,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 13:08:58] 2026-02-01 11:47:56,173 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-01 13:08:58] 2026-02-01 11:47:56,173 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-01 13:08:58] 2026-02-01 11:47:56,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 13:08:58] 2026-02-01 11:47:56,173 | INFO     | will abort loop
[2026-02-01 13:08:58] 2026-02-01 11:47:56,230 | INFO     | all data control threads have been joined
[2026-02-01 13:08:58] 2026-02-01 11:47:56,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 13:08:58] 2026-02-01 11:47:56,904 | INFO     | [job] retrieve thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:56,909 | INFO     | [data] copytool_in thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:57,131 | INFO     | all payload control threads have been joined
[2026-02-01 13:08:58] 2026-02-01 11:47:57,179 | INFO     | [job] job monitor thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:57,231 | INFO     | [data] control thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:57,371 | INFO     | [payload] failed_post thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:57,536 | INFO     | all job control threads have been joined
[2026-02-01 13:08:58] 2026-02-01 11:47:57,641 | INFO     | [payload] validate_post thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:57,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 13:08:58] 2026-02-01 11:47:57,869 | INFO     | [job] validate thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:58,136 | INFO     | [payload] control thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:58,220 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:58,264 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:58,330 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:58,411 | INFO     | [data] copytool_out thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:58,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 13:08:58] 2026-02-01 11:47:58,541 | INFO     | [job] control thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:47:59,454 | INFO     | [job] queue monitor thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:48:01,785 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:48:06,716 | INFO     | job.realtimelogging is not enabled
[2026-02-01 13:08:58] 2026-02-01 11:48:07,722 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 13:08:58] 2026-02-01 11:48:25,582 | INFO     | PID=2653847 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 13:08:58] 2026-02-01 11:48:25,582 | INFO     | .. there are 6 such processes running
[2026-02-01 13:08:58] 2026-02-01 11:48:25,582 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 13:08:58] 2026-02-01 11:48:25,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 13:08:58] 2026-02-01 11:48:25,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 13:08:58] 2026-02-01 11:48:31,366 | INFO     | [monitor] cgroup control has ended
[2026-02-01 13:08:58] 2026-02-01 11:48:32,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22359104128832)>', '<ExcThread(monitor, started 22358867064576)>']
[2026-02-01 13:08:58] 2026-02-01 11:48:33,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 13:08:58] 2026-02-01 11:48:33,618 | INFO     | [monitor] control thread has ended
[2026-02-01 13:08:58] 2026-02-01 11:48:37,952 | INFO     | all workflow threads have been joined
[2026-02-01 13:08:58] 2026-02-01 11:48:37,952 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 13:08:58] 2026-02-01 11:48:37,952 | INFO     | traces error code: 0
[2026-02-01 13:08:58] 2026-02-01 11:48:37,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 13:08:58] 2026-02-01 11:48:38,118 [wrapper] ==== pilot stdout END ====
[2026-02-01 13:08:58] 2026-02-01 11:48:38,121 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 13:08:58] 2026-02-01 11:48:38,123 [wrapper] pilotpid: 2653847
[2026-02-01 13:08:58] 2026-02-01 11:48:38,125 [wrapper] Pilot exit status: 0
[2026-02-01 13:08:58] 2026-02-01 11:48:38,135 [wrapper] pandaids: 6991270947
[2026-02-01 13:08:58] 2026-02-01 11:48:38,212 [wrapper] cleanup supervisor_pilot 2787076 2653848
[2026-02-01 13:08:58] 2026-02-01 11:48:38,214 [wrapper] Test setup, not cleaning
[2026-02-01 13:08:58] 2026-02-01 11:48:38,218 [wrapper] apfmon messages muted
[2026-02-01 13:08:58] 2026-02-01 11:48:38,221 [wrapper] ==== wrapper stdout END ====
[2026-02-01 13:08:58] 2026-02-01 11:48:38,224 [wrapper] ==== wrapper stderr END ====
[2026-02-01 13:08:58]  *** Error codes and diagnostics ***
[2026-02-01 13:08:58]     "exeErrorCode": 0,
[2026-02-01 13:08:58]     "exeErrorDiag": "",
[2026-02-01 13:08:58]     "pilotErrorCode": 0,
[2026-02-01 13:08:58]     "pilotErrorDiag": "",
[2026-02-01 13:08:58]  *** Listing of results directory ***
[2026-02-01 13:08:58] total 669116
[2026-02-01 13:08:58] -rwx------ 1 boinc boinc     36322 Feb  1 01:39 runpilot2-wrapper.sh
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc      5111 Feb  1 01:40 queuedata.json
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc    584422 Feb  1 01:41 pilot3.tar.gz
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc       100 Feb  1 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 13:08:58] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 09:35 run_atlas
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc       105 Feb  1 09:35 job.xml
[2026-02-01 13:08:58] -rw-r--r-- 2 boinc boinc 497734785 Feb  1 09:35 EVNT.48318032._000080.pool.root.1
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc      6637 Feb  1 09:35 init_data.xml
[2026-02-01 13:08:58] -rw-r--r-- 2 boinc boinc     15845 Feb  1 09:35 start_atlas.sh
[2026-02-01 13:08:58] drwxrwx--x 2 boinc boinc      4096 Feb  1 09:35 shared
[2026-02-01 13:08:58] -rw-r--r-- 2 boinc boinc    597767 Feb  1 09:35 input.tar.gz
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc         0 Feb  1 09:35 boinc_lockfile
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc      2535 Feb  1 09:35 pandaJob.out
[2026-02-01 13:08:58] -rw------- 1 boinc boinc   1010520 Feb  1 09:36 agis_schedconf.cvmfs.json
[2026-02-01 13:08:58] -rw------- 1 boinc boinc       447 Feb  1 09:36 workernode_map.json
[2026-02-01 13:08:58] drwx------ 5 boinc boinc      4096 Feb  1 09:36 pilot3
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc       528 Feb  1 12:47 boinc_task_state.xml
[2026-02-01 13:08:58] -rw------- 1 boinc boinc 179516259 Feb  1 12:47 HITS.48318034._004337.pool.root.1
[2026-02-01 13:08:58] -rw------- 1 boinc boinc      1033 Feb  1 12:47 memory_monitor_summary.json
[2026-02-01 13:08:58] -rw------- 1 boinc boinc        95 Feb  1 12:47 pilot_heartbeat.json
[2026-02-01 13:08:58] -rw------- 1 boinc boinc   1511668 Feb  1 12:47 agis_ddmendpoints.agis.ALL.json
[2026-02-01 13:08:58] -rw------- 1 boinc boinc    376296 Feb  1 12:47 log.48318034._004337.job.log.tgz.1
[2026-02-01 13:08:58] -rw------- 1 boinc boinc      6405 Feb  1 12:47 heartbeat.json
[2026-02-01 13:08:58] -rw------- 1 boinc boinc      5087 Feb  1 12:48 pilotlog.txt
[2026-02-01 13:08:58] -rw------- 1 boinc boinc   1617146 Feb  1 12:48 log.48318034._004337.job.log.1
[2026-02-01 13:08:58] -rw------- 1 boinc boinc       357 Feb  1 12:48 output.list
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc       620 Feb  1 12:48 runtime_log
[2026-02-01 13:08:58] -rw------- 1 boinc boinc   2007040 Feb  1 12:48 result.tar.gz
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc      9205 Feb  1 12:48 runtime_log.err
[2026-02-01 13:08:58] -rw------- 1 boinc boinc       665 Feb  1 12:48 VgHLDmbfa68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmA8OKDmVv4dAo.diag
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc        26 Feb  1 13:08 wrapper_checkpoint.txt
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc      8192 Feb  1 13:08 boinc_mmap_file
[2026-02-01 13:08:58] -rw-r--r-- 1 boinc boinc     21124 Feb  1 13:08 stderr.txt
[2026-02-01 13:08:58] HITS file was successfully produced:
[2026-02-01 13:08:58] -rw------- 1 boinc boinc 179516259 Feb  1 12:47 shared/HITS.pool.root.1
[2026-02-01 13:08:58]  *** Contents of shared directory: ***
[2026-02-01 13:08:58] total 663952
[2026-02-01 13:08:58] -rw-r--r-- 2 boinc boinc 497734785 Feb  1 09:35 ATLAS.root_0
[2026-02-01 13:08:58] -rw-r--r-- 2 boinc boinc     15845 Feb  1 09:35 start_atlas.sh
[2026-02-01 13:08:58] -rw-r--r-- 2 boinc boinc    597767 Feb  1 09:35 input.tar.gz
[2026-02-01 13:08:58] -rw------- 1 boinc boinc 179516259 Feb  1 12:47 HITS.pool.root.1
[2026-02-01 13:08:58] -rw------- 1 boinc boinc   2007040 Feb  1 12:48 result.tar.gz
13:08:59 (2642792): run_atlas exited; CPU time 44541.277061
13:08:59 (2642792): called boinc_finish(0)

</stderr_txt>
]]>

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