Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:11:51 (777455): wrapper (7.7.26015): starting
04:11:51 (777455): wrapper: running run_atlas (--nthreads 6)
[2026-02-02 04:11:51] Arguments: --nthreads 6
[2026-02-02 04:11:51] Threads: 6
[2026-02-02 04:11:51] Checking for CVMFS
[2026-02-02 04:11:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 04:11:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 04:11:54] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 04:11:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 04:11:55] 2.13.3.0 707625 572 58280 155760 2 49 41399259 52428801 0 130560 0 227944 99.976 20879 99 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-02 04:11:55] CVMFS is ok
[2026-02-02 04:11:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 04:11:55] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-02 04:11:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-02 04:11:55] Further information can be found at the LHC@home message board.
[2026-02-02 04:11:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 04:11:55] Checking for apptainer binary...
[2026-02-02 04:11:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 04:11:55] Running /usr/bin/apptainer --version
[2026-02-02 04:11:55] apptainer version 1.4.5-2.el9
[2026-02-02 04:11:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 04:11:55] Atto003
[2026-02-02 04:11:55] apptainer works
[2026-02-02 04:11:55] Set ATHENA_PROC_NUMBER=6
[2026-02-02 04:11:55] Set ATHENA_CORE_NUMBER=6
[2026-02-02 04:11:55] Starting ATLAS job with PandaID=6995282861
[2026-02-02 04:11:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 05:52:46]  *** The last 200 lines of the pilot log: ***
[2026-02-02 05:52:46]  guid=b8ade280-30a3-4230-b9fa-767c0e2fadf5
[2026-02-02 05:52:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 05:52:46]  is_altstaged=None
[2026-02-02 05:52:46]  is_tar=False
[2026-02-02 05:52:46]  lfn=log.48317931._010489.job.log.tgz.1
[2026-02-02 05:52:46]  mtime=0
[2026-02-02 05:52:46]  protocol_id=None
[2026-02-02 05:52:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 05:52:46]  replicas=None
[2026-02-02 05:52:46]  scope=mc23_13p6TeV
[2026-02-02 05:52:46]  status=None
[2026-02-02 05:52:46]  status_code=0
[2026-02-02 05:52:46]  storage_token=
[2026-02-02 05:52:46]  surl=/var/lib/boinc/slots/5/PanDA_Pilot-6995282861/log.48317931._010489.job.log.tgz.1
[2026-02-02 05:52:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/0b/log.48317931._010489.job.log.tgz.1
[2026-02-02 05:52:46]  workdir=None
[2026-02-02 05:52:46] ]
[2026-02-02 05:52:46] 2026-02-01 20:52:00,560 | INFO     | transferring file log.48317931._010489.job.log.tgz.1 from /var/lib/boinc/slots/5/PanDA_Pilot-6995282861/log.48317931._010489.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-02 05:52:46] 2026-02-01 20:52:00,560 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/5/PanDA_Pilot-6995282861/log.48317931._010489.job.log.tgz.1 /var/lib/boinc/slots/5/log.48317931._010489.job
[2026-02-02 05:52:46] 2026-02-01 20:52:00,572 | INFO     | adding to output.list: log.48317931._010489.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/0b/log.48317931._010489.job.log.tg
[2026-02-02 05:52:46] 2026-02-01 20:52:00,573 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 05:52:46] 2026-02-01 20:52:00,573 | INFO     | summary of transferred files:
[2026-02-02 05:52:46] 2026-02-01 20:52:00,573 | INFO     |  -- lfn=log.48317931._010489.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 05:52:46] 2026-02-01 20:52:00,573 | INFO     | stage-out finished correctly
[2026-02-02 05:52:46] 2026-02-01 20:52:00,721 | INFO     | time since job start (5970s) is within the limit (349056.0s)
[2026-02-02 05:52:46] 2026-02-01 20:52:00,882 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 05:52:46] 2026-02-01 20:52:02,727 | INFO     | time since job start (5972s) is within the limit (349056.0s)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,316 | INFO     | job 6995282861 has state=finished
[2026-02-02 05:52:46] 2026-02-01 20:52:03,316 | INFO     | preparing for final server update for job 6995282861 in state='finished'
[2026-02-02 05:52:46] 2026-02-01 20:52:03,317 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-6995282861/jobReport.json
[2026-02-02 05:52:46] 2026-02-01 20:52:03,318 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-02-02 05:52:46] 2026-02-01 20:52:03,318 | INFO     | this job has now completed (state=finished)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,318 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,318 | INFO     | log transfer has been attempted: DONE
[2026-02-02 05:52:46] 2026-02-01 20:52:03,319 | INFO     | job 6995282861 has finished - writing final server update
[2026-02-02 05:52:46] 2026-02-01 20:52:03,319 | INFO     | total number of processed events: 400 (read)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,321 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6995282861/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,321 | INFO     | extracted standard info from prmon json
[2026-02-02 05:52:46] 2026-02-01 20:52:03,321 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 05:52:46] 2026-02-01 20:52:03,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 05:52:46] 2026-02-01 20:52:03,322 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 05:52:46] 2026-02-01 20:52:03,322 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 05:52:46] 2026-02-01 20:52:03,323 | INFO     | fitting pss+swap vs Time
[2026-02-02 05:52:46] 2026-02-01 20:52:03,323 | INFO     | sum of square deviations: 233641590.0
[2026-02-02 05:52:46] 2026-02-01 20:52:03,323 | INFO     | sum of deviations: -7947507183.0
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | mean x: 1769976221.0
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | mean y: 2575627.1208791207
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | intersect: 60209744779.3968
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | chi2: 0.030986300081220046
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | current memory leak: -34.02 B/s (using 91 data points, chi2=0.03)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | ..............................
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | . Timing measurements:
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | . get job = 0 s
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | . initial setup = 14 s
[2026-02-02 05:52:46] 2026-02-01 20:52:03,324 | INFO     | . payload setup = 5 s
[2026-02-02 05:52:46] 2026-02-01 20:52:03,325 | INFO     | . stage-in = 0 s
[2026-02-02 05:52:46] 2026-02-01 20:52:03,325 | INFO     | . payload execution = 5949 s
[2026-02-02 05:52:46] 2026-02-01 20:52:03,325 | INFO     | . stage-out = 0 s
[2026-02-02 05:52:46] 2026-02-01 20:52:03,325 | INFO     | . log creation = 0 s
[2026-02-02 05:52:46] 2026-02-01 20:52:03,325 | INFO     | ..............................
[2026-02-02 05:52:46] 2026-02-01 20:52:03,379 | INFO     | 
[2026-02-02 05:52:46] 2026-02-01 20:52:03,379 | INFO     | job summary report
[2026-02-02 05:52:46] 2026-02-01 20:52:03,379 | INFO     | --------------------------------------------------
[2026-02-02 05:52:46] 2026-02-01 20:52:03,379 | INFO     | PanDA job id: 6995282861
[2026-02-02 05:52:46] 2026-02-01 20:52:03,379 | INFO     | task id: 48317931
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | errors: (none)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | pilot state: finished 
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | transexitcode: 0
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | exeerrorcode: 0
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | exeerrordiag: 
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | exitcode: 0
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | exitmsg: OK
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | cpuconsumptiontime: 33905 s
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | nevents: 400
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | neventsw: 0
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | pid: 786249
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | pgrp: 786249
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | corecount: 6
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | event service: False
[2026-02-02 05:52:46] 2026-02-01 20:52:03,380 | INFO     | sizes: {0: 2277728, 1: 2278189, 11: 2278189, 5958: 2305035, 5959: 2314089, 5962: 2314227}
[2026-02-02 05:52:46] 2026-02-01 20:52:03,381 | INFO     | --------------------------------------------------
[2026-02-02 05:52:46] 2026-02-01 20:52:03,381 | INFO     | 
[2026-02-02 05:52:46] 2026-02-01 20:52:03,381 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | job 6995282861 has completed (purged errors)
[2026-02-02 05:52:46] 2026-02-01 20:52:03,404 | INFO     | overall cleanup function is called
[2026-02-02 05:52:46] 2026-02-01 20:52:04,410 | INFO     | --- collectZombieJob: --- 10, [786249]
[2026-02-02 05:52:46] 2026-02-01 20:52:04,410 | INFO     | zombie collector waiting for pid 786249
[2026-02-02 05:52:46] 2026-02-01 20:52:04,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 05:52:46] 2026-02-01 20:52:04,410 | INFO     | collected zombie processes
[2026-02-02 05:52:46] 2026-02-01 20:52:04,410 | INFO     | will attempt to kill all subprocesses of pid=786249
[2026-02-02 05:52:46] 2026-02-01 20:52:04,472 | INFO     | process IDs to be killed: [786249] (in reverse order)
[2026-02-02 05:52:46] 2026-02-01 20:52:04,499 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 05:52:46] 2026-02-01 20:52:04,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 05:52:46] 2026-02-01 20:52:04,501 | INFO     | did not find any defunct processes belonging to 786249
[2026-02-02 05:52:46] 2026-02-01 20:52:04,503 | INFO     | did not find any defunct processes belonging to 786249
[2026-02-02 05:52:46] 2026-02-01 20:52:04,503 | INFO     | ready for new job
[2026-02-02 05:52:46] 2026-02-01 20:52:04,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 05:52:46] 2026-02-01 20:52:04,504 | INFO     | **************************************
[2026-02-02 05:52:46] 2026-02-01 20:52:04,504 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 05:52:46] 2026-02-01 20:52:04,504 | INFO     | **************************************
[2026-02-02 05:52:46] 2026-02-01 20:52:04,504 | INFO     | 
[2026-02-02 05:52:46] 2026-02-01 20:52:04,505 | INFO     | architecture information:
[2026-02-02 05:52:46] 2026-02-01 20:52:04,505 | INFO     | executing command: cat /etc/os-release
[2026-02-02 05:52:46] 2026-02-01 20:52:04,517 | INFO     | cat /etc/os-release:
[2026-02-02 05:52:46] NAME="CentOS Linux"
[2026-02-02 05:52:46] VERSION="7 (Core)"
[2026-02-02 05:52:46] ID="centos"
[2026-02-02 05:52:46] ID_LIKE="rhel fedora"
[2026-02-02 05:52:46] VERSION_ID="7"
[2026-02-02 05:52:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 05:52:46] ANSI_COLOR="0;31"
[2026-02-02 05:52:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 05:52:46] HOME_URL="https://www.centos.org/"
[2026-02-02 05:52:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 05:52:46] 
[2026-02-02 05:52:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 05:52:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 05:52:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 05:52:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 05:52:46] 
[2026-02-02 05:52:46] 2026-02-01 20:52:04,517 | INFO     | **************************************
[2026-02-02 05:52:46] 2026-02-01 20:52:05,020 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-02 05:52:46] 2026-02-01 20:52:05,029 | INFO     | sufficient remaining disk space (100866719744 B)
[2026-02-02 05:52:46] 2026-02-01 20:52:05,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 05:52:46] 2026-02-01 20:52:05,029 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 05:52:46] 2026-02-01 20:52:05,030 | INFO     | update_server=False
[2026-02-02 05:52:46] 2026-02-01 20:52:05,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 05:52:46] 2026-02-01 20:52:05,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:52:46] 2026-02-01 20:52:05,114 | WARNING  | process 786249 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 05:52:46] 2026-02-01 20:52:05,167 | INFO     | using path: /var/lib/boinc/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 05:52:46] 2026-02-01 20:52:05,230 | INFO     | number of running child processes to parent process 786249: 1
[2026-02-02 05:52:46] 2026-02-01 20:52:05,231 | INFO     | maximum number of monitored processes: 6
[2026-02-02 05:52:46] 2026-02-01 20:52:05,231 | INFO     | aborting job monitoring since job object (job id=6995282861) has expired
[2026-02-02 05:52:46] 2026-02-01 20:52:05,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 05:52:46] 2026-02-01 20:52:05,231 | INFO     | will abort loop
[2026-02-02 05:52:46] 2026-02-01 20:52:05,262 | INFO     | all job control threads have been joined
[2026-02-02 05:52:46] 2026-02-01 20:52:05,626 | INFO     | all data control threads have been joined
[2026-02-02 05:52:46] 2026-02-01 20:52:06,034 | INFO     | [job] queue monitor thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:06,035 | INFO     | [job] retrieve thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:06,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 05:52:46] 2026-02-01 20:52:06,148 | INFO     | [data] copytool_in thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:06,236 | INFO     | [job] job monitor thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:06,267 | INFO     | [job] control thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:06,435 | INFO     | all payload control threads have been joined
[2026-02-02 05:52:46] 2026-02-01 20:52:06,628 | INFO     | [data] control thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:06,924 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:06,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 05:52:46] 2026-02-01 20:52:07,215 | INFO     | [payload] failed_post thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:07,307 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:07,308 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:07,325 | INFO     | [job] validate thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:07,375 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:07,415 | INFO     | [payload] validate_post thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:07,440 | INFO     | [payload] control thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:08,153 | INFO     | [data] copytool_out thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:10,954 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 05:52:46] 2026-02-01 20:52:35,868 | INFO     | PID=781618 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 05:52:46] 2026-02-01 20:52:35,868 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 05:52:46] 2026-02-01 20:52:35,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 05:52:46] 2026-02-01 20:52:35,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 05:52:46] 2026-02-01 20:52:40,431 | INFO     | [monitor] cgroup control has ended
[2026-02-02 05:52:46] 2026-02-01 20:52:40,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140274015389504)>', '<ExcThread(monitor, started 140273657030400)>']
[2026-02-02 05:52:46] 2026-02-01 20:52:41,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 05:52:46] 2026-02-01 20:52:41,898 | INFO     | [monitor] control thread has ended
[2026-02-02 05:52:46] 2026-02-01 20:52:45,940 | INFO     | all workflow threads have been joined
[2026-02-02 05:52:46] 2026-02-01 20:52:45,941 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 05:52:46] 2026-02-01 20:52:45,941 | INFO     | traces error code: 0
[2026-02-02 05:52:46] 2026-02-01 20:52:45,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 05:52:46] 2026-02-01 20:52:46,015 [wrapper] ==== pilot stdout END ====
[2026-02-02 05:52:46] 2026-02-01 20:52:46,017 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 05:52:46] 2026-02-01 20:52:46,018 [wrapper] pilotpid: 781618
[2026-02-02 05:52:46] 2026-02-01 20:52:46,021 [wrapper] Pilot exit status: 0
[2026-02-02 05:52:46] 2026-02-01 20:52:46,025 [wrapper] pandaids: 6995282861
[2026-02-02 05:52:46] 2026-02-01 20:52:46,041 [wrapper] cleanup supervisor_pilot  791147 781619
[2026-02-02 05:52:46] 2026-02-01 20:52:46,043 [wrapper] Test setup, not cleaning
[2026-02-02 05:52:46] 2026-02-01 20:52:46,044 [wrapper] apfmon messages muted
[2026-02-02 05:52:46] 2026-02-01 20:52:46,045 [wrapper] ==== wrapper stdout END ====
[2026-02-02 05:52:46] 2026-02-01 20:52:46,047 [wrapper] ==== wrapper stderr END ====
[2026-02-02 05:52:46]  *** Error codes and diagnostics ***
[2026-02-02 05:52:46]     "exeErrorCode": 0,
[2026-02-02 05:52:46]     "exeErrorDiag": "",
[2026-02-02 05:52:46]     "pilotErrorCode": 0,
[2026-02-02 05:52:46]     "pilotErrorDiag": "",
[2026-02-02 05:52:46]  *** Listing of results directory ***
[2026-02-02 05:52:46] total 677796
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc    584422 Feb  1 11:40 pilot3.tar.gz
[2026-02-02 05:52:46] -rwx------. 1 boinc boinc     36322 Feb  1 11:40 runpilot2-wrapper.sh
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc      5111 Feb  1 11:41 queuedata.json
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc       100 Feb  2 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 05:52:46] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 04:11 run_atlas
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc       105 Feb  2 04:11 job.xml
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc      9345 Feb  2 04:11 init_data.xml
[2026-02-02 05:52:46] -rw-r--r--. 2 boinc boinc 505105562 Feb  2 04:11 EVNT.48317929._000145.pool.root.1
[2026-02-02 05:52:46] -rw-r--r--. 2 boinc boinc     15845 Feb  2 04:11 start_atlas.sh
[2026-02-02 05:52:46] drwxrwx--x. 2 boinc boinc        68 Feb  2 04:11 shared
[2026-02-02 05:52:46] -rw-r--r--. 2 boinc boinc    597768 Feb  2 04:11 input.tar.gz
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc         0 Feb  2 04:11 boinc_lockfile
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc      2511 Feb  2 04:11 pandaJob.out
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc   1009765 Feb  2 04:12 agis_schedconf.cvmfs.json
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc   1511668 Feb  2 04:12 agis_ddmendpoints.agis.ALL.json
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc       426 Feb  2 04:12 workernode_map.json
[2026-02-02 05:52:46] drwx------. 5 boinc boinc      4096 Feb  2 04:12 pilot3
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc 182646316 Feb  2 05:51 HITS.48317931._010489.pool.root.1
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc      1026 Feb  2 05:51 memory_monitor_summary.json
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc       530 Feb  2 05:51 boinc_task_state.xml
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc    328488 Feb  2 05:52 log.48317931._010489.job.log.tgz.1
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc        95 Feb  2 05:52 pilot_heartbeat.json
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc      6328 Feb  2 05:52 heartbeat.json
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc      8192 Feb  2 05:52 boinc_mmap_file
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc        27 Feb  2 05:52 wrapper_checkpoint.txt
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc      5263 Feb  2 05:52 pilotlog.txt
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc    861023 Feb  2 05:52 log.48317931._010489.job.log.1
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc       357 Feb  2 05:52 output.list
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc       620 Feb  2 05:52 runtime_log
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc   1208320 Feb  2 05:52 result.tar.gz
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc      8764 Feb  2 05:52 runtime_log.err
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc       640 Feb  2 05:52 GLNMDmaZc68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhHPKDmKziWMo.diag
[2026-02-02 05:52:46] -rw-r--r--. 1 boinc boinc     21445 Feb  2 05:52 stderr.txt
[2026-02-02 05:52:46] HITS file was successfully produced:
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc 182646316 Feb  2 05:51 shared/HITS.pool.root.1
[2026-02-02 05:52:46]  *** Contents of shared directory: ***
[2026-02-02 05:52:46] total 673416
[2026-02-02 05:52:46] -rw-r--r--. 2 boinc boinc 505105562 Feb  2 04:11 ATLAS.root_0
[2026-02-02 05:52:46] -rw-r--r--. 2 boinc boinc     15845 Feb  2 04:11 start_atlas.sh
[2026-02-02 05:52:46] -rw-r--r--. 2 boinc boinc    597768 Feb  2 04:11 input.tar.gz
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc 182646316 Feb  2 05:51 HITS.pool.root.1
[2026-02-02 05:52:46] -rw-------. 1 boinc boinc   1208320 Feb  2 05:52 result.tar.gz
05:52:47 (777455): run_atlas exited; CPU time 33966.844807
05:52:47 (777455): called boinc_finish(0)

</stderr_txt>
]]>

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