Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:52:50 (791306): wrapper (7.7.26015): starting
05:52:50 (791306): wrapper: running run_atlas (--nthreads 6)
[2026-02-02 05:52:50] Arguments: --nthreads 6
[2026-02-02 05:52:50] Threads: 6
[2026-02-02 05:52:50] Checking for CVMFS
[2026-02-02 05:52:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 05:52:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 05:52:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 05:52:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 05:52:56] 2.13.3.0 707625 673 61528 155762 2 50 41406420 52428800 0 130560 0 273313 99.979 23637 100 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-02 05:52:56] CVMFS is ok
[2026-02-02 05:52:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 05:52:56] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-02 05:52:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-02 05:52:56] Further information can be found at the LHC@home message board.
[2026-02-02 05:52:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 05:52:56] Checking for apptainer binary...
[2026-02-02 05:52:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-02 05:52:56] Running /usr/bin/apptainer --version
[2026-02-02 05:52:56] apptainer version 1.4.5-2.el9
[2026-02-02 05:52:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 05:52:56] Atto003
[2026-02-02 05:52:56] apptainer works
[2026-02-02 05:52:56] Set ATHENA_PROC_NUMBER=6
[2026-02-02 05:52:56] Set ATHENA_CORE_NUMBER=6
[2026-02-02 05:52:56] Starting ATLAS job with PandaID=6995282860
[2026-02-02 05:52:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 07:33:01]  *** The last 200 lines of the pilot log: ***
[2026-02-02 07:33:01]  guid=28c9953c-fd40-4bdd-908c-df6a126ca3e0
[2026-02-02 07:33:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-02 07:33:01]  is_altstaged=None
[2026-02-02 07:33:01]  is_tar=False
[2026-02-02 07:33:01]  lfn=log.48317931._010488.job.log.tgz.1
[2026-02-02 07:33:01]  mtime=0
[2026-02-02 07:33:01]  protocol_id=None
[2026-02-02 07:33:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-02 07:33:01]  replicas=None
[2026-02-02 07:33:01]  scope=mc23_13p6TeV
[2026-02-02 07:33:01]  status=None
[2026-02-02 07:33:01]  status_code=0
[2026-02-02 07:33:01]  storage_token=
[2026-02-02 07:33:01]  surl=/var/lib/boinc/slots/5/PanDA_Pilot-6995282860/log.48317931._010488.job.log.tgz.1
[2026-02-02 07:33:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/2f/log.48317931._010488.job.log.tgz.1
[2026-02-02 07:33:01]  workdir=None
[2026-02-02 07:33:01] ]
[2026-02-02 07:33:01] 2026-02-01 22:32:25,003 | INFO     | transferring file log.48317931._010488.job.log.tgz.1 from /var/lib/boinc/slots/5/PanDA_Pilot-6995282860/log.48317931._010488.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-02 07:33:01] 2026-02-01 22:32:25,003 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/5/PanDA_Pilot-6995282860/log.48317931._010488.job.log.tgz.1 /var/lib/boinc/slots/5/log.48317931._010488.job
[2026-02-02 07:33:01] 2026-02-01 22:32:25,013 | INFO     | adding to output.list: log.48317931._010488.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/2f/log.48317931._010488.job.log.tg
[2026-02-02 07:33:01] 2026-02-01 22:32:25,014 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-02 07:33:01] 2026-02-01 22:32:25,014 | INFO     | summary of transferred files:
[2026-02-02 07:33:01] 2026-02-01 22:32:25,014 | INFO     |  -- lfn=log.48317931._010488.job.log.tgz.1, status_code=0, status=transferred
[2026-02-02 07:33:01] 2026-02-01 22:32:25,014 | INFO     | stage-out finished correctly
[2026-02-02 07:33:01] 2026-02-01 22:32:25,693 | INFO     | PID=795463 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 07:33:01] 2026-02-01 22:32:25,758 | INFO     | monitor loop #454: job 0:6995282860 is in state 'finished'
[2026-02-02 07:33:01] 2026-02-01 22:32:25,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 07:33:01] 2026-02-01 22:32:26,694 | INFO     | time since job start (5941s) is within the limit (349056.0s)
[2026-02-02 07:33:01] 2026-02-01 22:32:28,261 | INFO     | monitor loop #455: job 0:6995282860 is in state 'finished'
[2026-02-02 07:33:01] 2026-02-01 22:32:28,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-02 07:33:01] 2026-02-01 22:32:28,547 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-02 07:33:01] 2026-02-01 22:32:28,699 | INFO     | time since job start (5943s) is within the limit (349056.0s)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,097 | INFO     | job 6995282860 has state=finished
[2026-02-02 07:33:01] 2026-02-01 22:32:30,097 | INFO     | preparing for final server update for job 6995282860 in state='finished'
[2026-02-02 07:33:01] 2026-02-01 22:32:30,097 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-6995282860/jobReport.json
[2026-02-02 07:33:01] 2026-02-01 22:32:30,103 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-02-02 07:33:01] 2026-02-01 22:32:30,103 | INFO     | this job has now completed (state=finished)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,103 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,103 | INFO     | log transfer has been attempted: DONE
[2026-02-02 07:33:01] 2026-02-01 22:32:30,103 | INFO     | job 6995282860 has finished - writing final server update
[2026-02-02 07:33:01] 2026-02-01 22:32:30,103 | INFO     | total number of processed events: 400 (read)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,106 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6995282860/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,106 | INFO     | extracted standard info from prmon json
[2026-02-02 07:33:01] 2026-02-01 22:32:30,106 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 07:33:01] 2026-02-01 22:32:30,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 07:33:01] 2026-02-01 22:32:30,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 07:33:01] 2026-02-01 22:32:30,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 07:33:01] 2026-02-01 22:32:30,108 | INFO     | fitting pss+swap vs Time
[2026-02-02 07:33:01] 2026-02-01 22:32:30,108 | INFO     | sum of square deviations: 226022842.5
[2026-02-02 07:33:01] 2026-02-01 22:32:30,109 | INFO     | sum of deviations: -14050830371.5
[2026-02-02 07:33:01] 2026-02-01 22:32:30,109 | INFO     | mean x: 1769982245.5
[2026-02-02 07:33:01] 2026-02-01 22:32:30,109 | INFO     | mean y: 2561804.788888889
[2026-02-02 07:33:01] 2026-02-01 22:32:30,109 | INFO     | intersect: 110034450692.68822
[2026-02-02 07:33:01] 2026-02-01 22:32:30,109 | INFO     | chi2: 0.16749714991299733
[2026-02-02 07:33:01] 2026-02-01 22:32:30,109 | INFO     | current memory leak: -62.17 B/s (using 90 data points, chi2=0.17)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | could have reported an average CPU frequency of 3600 MHz (7 samples)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | ..............................
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | . Timing measurements:
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | . get job = 0 s
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | . initial setup = 10 s
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | . payload setup = 5 s
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | . stage-in = 0 s
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | . payload execution = 5919 s
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | . stage-out = 0 s
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | . log creation = 0 s
[2026-02-02 07:33:01] 2026-02-01 22:32:30,110 | INFO     | ..............................
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | 
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | job summary report
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | --------------------------------------------------
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | PanDA job id: 6995282860
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | task id: 48317931
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | errors: (none)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | pilot state: finished 
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | transexitcode: 0
[2026-02-02 07:33:01] 2026-02-01 22:32:30,175 | INFO     | exeerrorcode: 0
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | exeerrordiag: 
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | exitcode: 0
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | exitmsg: OK
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | cpuconsumptiontime: 33449 s
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | nevents: 400
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | neventsw: 0
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | pid: 800091
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | pgrp: 800091
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | corecount: 6
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | event service: False
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | sizes: {0: 2277726, 1: 2278187, 11: 2278187, 5928: 2313998, 5932: 2313998, 5933: 2314192}
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | --------------------------------------------------
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | 
[2026-02-02 07:33:01] 2026-02-01 22:32:30,176 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-02 07:33:01] 2026-02-01 22:32:30,189 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,189 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,189 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,189 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,190 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 07:33:01] 2026-02-01 22:32:30,191 | INFO     | job 6995282860 has completed (purged errors)
[2026-02-02 07:33:01] 2026-02-01 22:32:30,191 | INFO     | overall cleanup function is called
[2026-02-02 07:33:01] 2026-02-01 22:32:31,196 | INFO     | --- collectZombieJob: --- 10, [800091]
[2026-02-02 07:33:01] 2026-02-01 22:32:31,196 | INFO     | zombie collector waiting for pid 800091
[2026-02-02 07:33:01] 2026-02-01 22:32:31,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 07:33:01] 2026-02-01 22:32:31,196 | INFO     | collected zombie processes
[2026-02-02 07:33:01] 2026-02-01 22:32:31,196 | INFO     | will attempt to kill all subprocesses of pid=800091
[2026-02-02 07:33:01] 2026-02-01 22:32:31,259 | INFO     | process IDs to be killed: [800091] (in reverse order)
[2026-02-02 07:33:01] 2026-02-01 22:32:31,284 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 07:33:01] 2026-02-01 22:32:31,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 07:33:01] 2026-02-01 22:32:31,286 | INFO     | did not find any defunct processes belonging to 800091
[2026-02-02 07:33:01] 2026-02-01 22:32:31,288 | INFO     | did not find any defunct processes belonging to 800091
[2026-02-02 07:33:01] 2026-02-01 22:32:31,288 | INFO     | ready for new job
[2026-02-02 07:33:01] 2026-02-01 22:32:31,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 07:33:01] 2026-02-01 22:32:31,289 | INFO     | **************************************
[2026-02-02 07:33:01] 2026-02-01 22:32:31,289 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 07:33:01] 2026-02-01 22:32:31,289 | INFO     | **************************************
[2026-02-02 07:33:01] 2026-02-01 22:32:31,289 | INFO     | 
[2026-02-02 07:33:01] 2026-02-01 22:32:31,290 | INFO     | architecture information:
[2026-02-02 07:33:01] 2026-02-01 22:32:31,290 | INFO     | executing command: cat /etc/os-release
[2026-02-02 07:33:01] 2026-02-01 22:32:31,298 | INFO     | cat /etc/os-release:
[2026-02-02 07:33:01] NAME="CentOS Linux"
[2026-02-02 07:33:01] VERSION="7 (Core)"
[2026-02-02 07:33:01] ID="centos"
[2026-02-02 07:33:01] ID_LIKE="rhel fedora"
[2026-02-02 07:33:01] VERSION_ID="7"
[2026-02-02 07:33:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 07:33:01] ANSI_COLOR="0;31"
[2026-02-02 07:33:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 07:33:01] HOME_URL="https://www.centos.org/"
[2026-02-02 07:33:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 07:33:01] 
[2026-02-02 07:33:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 07:33:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 07:33:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 07:33:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 07:33:01] 
[2026-02-02 07:33:01] 2026-02-01 22:32:31,299 | INFO     | **************************************
[2026-02-02 07:33:01] 2026-02-01 22:32:31,801 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-02 07:33:01] 2026-02-01 22:32:31,810 | INFO     | sufficient remaining disk space (101356404736 B)
[2026-02-02 07:33:01] 2026-02-01 22:32:31,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 07:33:01] 2026-02-01 22:32:31,810 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 07:33:01] 2026-02-01 22:32:31,810 | INFO     | update_server=False
[2026-02-02 07:33:01] 2026-02-01 22:32:31,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 07:33:01] 2026-02-01 22:32:31,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 07:33:01] 2026-02-01 22:32:31,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 07:33:01] 2026-02-01 22:32:31,811 | INFO     | aborting loop
[2026-02-02 07:33:01] 2026-02-01 22:32:31,877 | INFO     | all data control threads have been joined
[2026-02-02 07:33:01] 2026-02-01 22:32:32,790 | INFO     | all job control threads have been joined
[2026-02-02 07:33:01] 2026-02-01 22:32:32,815 | INFO     | [job] retrieve thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:32,815 | INFO     | [job] queue monitor thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:32,815 | INFO     | [job] job monitor thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:32,831 | INFO     | all payload control threads have been joined
[2026-02-02 07:33:01] 2026-02-01 22:32:32,882 | INFO     | [data] control thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:33,000 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:33,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 07:33:01] 2026-02-01 22:32:33,185 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:33,358 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:33,561 | INFO     | [payload] validate_post thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:33,613 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:33,691 | INFO     | [job] validate thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:33,710 | INFO     | [data] copytool_in thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:33,795 | INFO     | [job] control thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:33,836 | INFO     | [payload] control thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:34,221 | INFO     | [payload] failed_post thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:34,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 07:33:01] 2026-02-01 22:32:35,090 | INFO     | [monitor] cgroup control has ended
[2026-02-02 07:33:01] 2026-02-01 22:32:35,091 | INFO     | [data] copytool_out thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:38,623 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 07:33:01] 2026-02-01 22:32:38,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825080600384)>', '<ExcThread(monitor, started 139824707122944)>']
[2026-02-02 07:33:01] 2026-02-01 22:32:43,965 | INFO     | all workflow threads have been joined
[2026-02-02 07:33:01] 2026-02-01 22:32:43,965 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 07:33:01] 2026-02-01 22:32:43,965 | INFO     | traces error code: 0
[2026-02-02 07:33:01] 2026-02-01 22:32:43,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 07:33:01] 2026-02-01 22:33:01,802 | INFO     | PID=795463 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 07:33:01] 2026-02-01 22:33:01,803 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 07:33:01] 2026-02-01 22:33:01,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 07:33:01] 2026-02-01 22:33:01,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 07:33:01] 2026-02-01 22:33:01,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 07:33:01] 2026-02-01 22:33:01,803 | INFO     | [monitor] control thread has ended
[2026-02-02 07:33:01] 2026-02-01 22:33:01,862 [wrapper] ==== pilot stdout END ====
[2026-02-02 07:33:01] 2026-02-01 22:33:01,864 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 07:33:01] 2026-02-01 22:33:01,865 [wrapper] pilotpid: 795463
[2026-02-02 07:33:01] 2026-02-01 22:33:01,867 [wrapper] Pilot exit status: 0
[2026-02-02 07:33:01] 2026-02-01 22:33:01,873 [wrapper] pandaids: 6995282860
[2026-02-02 07:33:01] 2026-02-01 22:33:01,890 [wrapper] cleanup supervisor_pilot  805028 795464
[2026-02-02 07:33:01] 2026-02-01 22:33:01,893 [wrapper] Test setup, not cleaning
[2026-02-02 07:33:01] 2026-02-01 22:33:01,894 [wrapper] apfmon messages muted
[2026-02-02 07:33:01] 2026-02-01 22:33:01,898 [wrapper] ==== wrapper stdout END ====
[2026-02-02 07:33:01] 2026-02-01 22:33:01,899 [wrapper] ==== wrapper stderr END ====
[2026-02-02 07:33:01]  *** Error codes and diagnostics ***
[2026-02-02 07:33:01]     "exeErrorCode": 0,
[2026-02-02 07:33:01]     "exeErrorDiag": "",
[2026-02-02 07:33:01]     "pilotErrorCode": 0,
[2026-02-02 07:33:01]     "pilotErrorDiag": "",
[2026-02-02 07:33:01]  *** Listing of results directory ***
[2026-02-02 07:33:01] total 681052
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc    584422 Feb  1 11:40 pilot3.tar.gz
[2026-02-02 07:33:01] -rwx------. 1 boinc boinc     36322 Feb  1 11:40 runpilot2-wrapper.sh
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc      5111 Feb  1 11:41 queuedata.json
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc       100 Feb  2 05:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 07:33:01] -rwxr-xr-x. 1 boinc boinc      7986 Feb  2 05:52 run_atlas
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc       105 Feb  2 05:52 job.xml
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc      9345 Feb  2 05:52 init_data.xml
[2026-02-02 07:33:01] -rw-r--r--. 2 boinc boinc 505105562 Feb  2 05:52 EVNT.48317929._000145.pool.root.1
[2026-02-02 07:33:01] -rw-r--r--. 2 boinc boinc     15845 Feb  2 05:52 start_atlas.sh
[2026-02-02 07:33:01] drwxrwx--x. 2 boinc boinc        68 Feb  2 05:52 shared
[2026-02-02 07:33:01] -rw-r--r--. 2 boinc boinc    597765 Feb  2 05:52 input.tar.gz
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc         0 Feb  2 05:52 boinc_lockfile
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc      2510 Feb  2 05:52 pandaJob.out
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc   1009757 Feb  2 05:53 agis_schedconf.cvmfs.json
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc   1511668 Feb  2 05:53 agis_ddmendpoints.agis.ALL.json
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc       419 Feb  2 05:53 workernode_map.json
[2026-02-02 07:33:01] drwx------. 5 boinc boinc      4096 Feb  2 05:53 pilot3
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc 186016322 Feb  2 07:31 HITS.48317931._010488.pool.root.1
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc       530 Feb  2 07:32 boinc_task_state.xml
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc      1016 Feb  2 07:32 memory_monitor_summary.json
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc    316731 Feb  2 07:32 log.48317931._010488.job.log.tgz.1
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc      6313 Feb  2 07:32 heartbeat.json
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc        27 Feb  2 07:32 wrapper_checkpoint.txt
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc      8192 Feb  2 07:32 boinc_mmap_file
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc        95 Feb  2 07:33 pilot_heartbeat.json
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc       746 Feb  2 07:33 pilotlog.txt
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc    856282 Feb  2 07:33 log.48317931._010488.job.log.1
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc       357 Feb  2 07:33 output.list
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc       620 Feb  2 07:33 runtime_log
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc   1187840 Feb  2 07:33 result.tar.gz
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc      8764 Feb  2 07:33 runtime_log.err
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc       639 Feb  2 07:33 pEMMDmaZc68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgHPKDmoiIJJm.diag
[2026-02-02 07:33:01] -rw-r--r--. 1 boinc boinc     21555 Feb  2 07:33 stderr.txt
[2026-02-02 07:33:01] HITS file was successfully produced:
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc 186016322 Feb  2 07:31 shared/HITS.pool.root.1
[2026-02-02 07:33:01]  *** Contents of shared directory: ***
[2026-02-02 07:33:01] total 676688
[2026-02-02 07:33:01] -rw-r--r--. 2 boinc boinc 505105562 Feb  2 05:52 ATLAS.root_0
[2026-02-02 07:33:01] -rw-r--r--. 2 boinc boinc     15845 Feb  2 05:52 start_atlas.sh
[2026-02-02 07:33:01] -rw-r--r--. 2 boinc boinc    597765 Feb  2 05:52 input.tar.gz
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc 186016322 Feb  2 07:31 HITS.pool.root.1
[2026-02-02 07:33:01] -rw-------. 1 boinc boinc   1187840 Feb  2 07:33 result.tar.gz
07:33:03 (791306): run_atlas exited; CPU time 33509.659411
07:33:03 (791306): called boinc_finish(0)

</stderr_txt>
]]>

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