Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:41:02 (2157145): wrapper (7.7.26015): starting
07:41:02 (2157145): wrapper: running run_atlas (--nthreads 12)
[2026-02-01 07:41:02] Arguments: --nthreads 12
[2026-02-01 07:41:02] Threads: 12
[2026-02-01 07:41:02] Checking for CVMFS
[2026-02-01 07:41:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 07:41:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 07:41:02] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 07:41:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 07:41:03] 2.11.0.0 921820 3510 95992 155743 1 188 4050140 6144000 11393 130560 0 34562185 99.999 133054 171 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-01 07:41:03] CVMFS is ok
[2026-02-01 07:41:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 07:41:03] Checking for apptainer binary...
[2026-02-01 07:41:03] apptainer is not installed, using version from CVMFS
[2026-02-01 07:41:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 07:41:03] radiat0r
[2026-02-01 07:41:03] apptainer works
[2026-02-01 07:41:03] Set ATHENA_PROC_NUMBER=12
[2026-02-01 07:41:03] Set ATHENA_CORE_NUMBER=12
[2026-02-01 07:41:03] Starting ATLAS job with PandaID=6995282805
[2026-02-01 07:41:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 08:36:33]  *** The last 200 lines of the pilot log: ***
[2026-02-01 08:36:33]  is_altstaged=None
[2026-02-01 08:36:33]  is_tar=False
[2026-02-01 08:36:33]  lfn=log.48317892._005723.job.log.tgz.1
[2026-02-01 08:36:33]  mtime=0
[2026-02-01 08:36:33]  protocol_id=None
[2026-02-01 08:36:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 08:36:33]  replicas=None
[2026-02-01 08:36:33]  scope=mc23_13p6TeV
[2026-02-01 08:36:33]  status=None
[2026-02-01 08:36:33]  status_code=0
[2026-02-01 08:36:33]  storage_token=
[2026-02-01 08:36:33]  surl=/var/lib/boinc/slots/22/PanDA_Pilot-6995282805/log.48317892._005723.job.log.tgz.1
[2026-02-01 08:36:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/60/log.48317892._005723.job.log.tgz.1
[2026-02-01 08:36:33]  workdir=None
[2026-02-01 08:36:33] ]
[2026-02-01 08:36:33] 2026-02-01 08:35:36,876 | INFO     | transferring file log.48317892._005723.job.log.tgz.1 from /var/lib/boinc/slots/22/PanDA_Pilot-6995282805/log.48317892._005723.job.log.tgz.1 to /var/lib/boinc/slots
[2026-02-01 08:36:33] 2026-02-01 08:35:36,877 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/22/PanDA_Pilot-6995282805/log.48317892._005723.job.log.tgz.1 /var/lib/boinc/slots/22/log.48317892._005723.j
[2026-02-01 08:36:33] 2026-02-01 08:35:36,899 | INFO     | adding to output.list: log.48317892._005723.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/60/log.48317892._005723.job.log.tg
[2026-02-01 08:36:33] 2026-02-01 08:35:36,900 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 08:36:33] 2026-02-01 08:35:36,900 | INFO     | summary of transferred files:
[2026-02-01 08:36:33] 2026-02-01 08:35:36,900 | INFO     |  -- lfn=log.48317892._005723.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 08:36:33] 2026-02-01 08:35:36,900 | INFO     | stage-out finished correctly
[2026-02-01 08:36:33] 2026-02-01 08:35:37,004 | INFO     | time since job start (3256s) is within the limit (349056.0s)
[2026-02-01 08:36:33] 2026-02-01 08:35:37,692 | INFO     | monitor loop #229: job 0:6995282805 is in state 'finished'
[2026-02-01 08:36:33] 2026-02-01 08:35:37,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-01 08:36:33] 2026-02-01 08:35:38,847 | INFO     | PID=2161905 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-01 08:36:33] 2026-02-01 08:35:38,847 | INFO     | .. there are 14 such processes running
[2026-02-01 08:36:33] 2026-02-01 08:35:39,308 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 08:36:33] 2026-02-01 08:35:39,848 | INFO     | time since job start (3258s) is within the limit (349056.0s)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,195 | INFO     | monitor loop #230: job 0:6995282805 is in state 'finished'
[2026-02-01 08:36:33] 2026-02-01 08:35:40,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,328 | INFO     | job 6995282805 has state=finished
[2026-02-01 08:36:33] 2026-02-01 08:35:40,329 | INFO     | preparing for final server update for job 6995282805 in state='finished'
[2026-02-01 08:36:33] 2026-02-01 08:35:40,330 | INFO     | reading metadata from: /var/lib/boinc/slots/22/PanDA_Pilot-6995282805/jobReport.json
[2026-02-01 08:36:33] 2026-02-01 08:35:40,334 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/22/workernode_map.json
[2026-02-01 08:36:33] 2026-02-01 08:35:40,334 | INFO     | this job has now completed (state=finished)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,335 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,335 | INFO     | log transfer has been attempted: DONE
[2026-02-01 08:36:33] 2026-02-01 08:35:40,335 | INFO     | job 6995282805 has finished - writing final server update
[2026-02-01 08:36:33] 2026-02-01 08:35:40,336 | INFO     | total number of processed events: 400 (read)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,410 | INFO     | using path: /var/lib/boinc/slots/22/PanDA_Pilot-6995282805/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,410 | INFO     | extracted standard info from prmon json
[2026-02-01 08:36:33] 2026-02-01 08:35:40,411 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 08:36:33] 2026-02-01 08:35:40,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 08:36:33] 2026-02-01 08:35:40,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 08:36:33] 2026-02-01 08:35:40,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 08:36:33] 2026-02-01 08:35:40,413 | INFO     | fitting pss+swap vs Time
[2026-02-01 08:36:33] 2026-02-01 08:35:40,413 | INFO     | sum of square deviations: 30168007.5
[2026-02-01 08:36:33] 2026-02-01 08:35:40,414 | INFO     | sum of deviations: -253494375.50000003
[2026-02-01 08:36:33] 2026-02-01 08:35:40,414 | INFO     | mean x: 1769933384.5
[2026-02-01 08:36:33] 2026-02-01 08:35:40,414 | INFO     | mean y: 2684050.6739130435
[2026-02-01 08:36:33] 2026-02-01 08:35:40,414 | INFO     | intersect: 14875000625.788425
[2026-02-01 08:36:33] 2026-02-01 08:35:40,414 | INFO     | chi2: 0.0009286227787874457
[2026-02-01 08:36:33] 2026-02-01 08:35:40,414 | INFO     | current memory leak: -8.40 B/s (using 46 data points, chi2=0.00)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,415 | INFO     | could have reported an average CPU frequency of 2382 MHz (5 samples)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,415 | INFO     | ..............................
[2026-02-01 08:36:33] 2026-02-01 08:35:40,415 | INFO     | . Timing measurements:
[2026-02-01 08:36:33] 2026-02-01 08:35:40,415 | INFO     | . get job = 0 s
[2026-02-01 08:36:33] 2026-02-01 08:35:40,415 | INFO     | . initial setup = 6 s
[2026-02-01 08:36:33] 2026-02-01 08:35:40,415 | INFO     | . payload setup = 7 s
[2026-02-01 08:36:33] 2026-02-01 08:35:40,415 | INFO     | . stage-in = 0 s
[2026-02-01 08:36:33] 2026-02-01 08:35:40,415 | INFO     | . payload execution = 3231 s
[2026-02-01 08:36:33] 2026-02-01 08:35:40,416 | INFO     | . stage-out = 0 s
[2026-02-01 08:36:33] 2026-02-01 08:35:40,416 | INFO     | . log creation = 0 s
[2026-02-01 08:36:33] 2026-02-01 08:35:40,416 | INFO     | ..............................
[2026-02-01 08:36:33] 2026-02-01 08:35:40,508 | INFO     | 
[2026-02-01 08:36:33] 2026-02-01 08:35:40,508 | INFO     | job summary report
[2026-02-01 08:36:33] 2026-02-01 08:35:40,508 | INFO     | --------------------------------------------------
[2026-02-01 08:36:33] 2026-02-01 08:35:40,508 | INFO     | PanDA job id: 6995282805
[2026-02-01 08:36:33] 2026-02-01 08:35:40,508 | INFO     | task id: 48317892
[2026-02-01 08:36:33] 2026-02-01 08:35:40,508 | INFO     | errors: (none)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | pilot state: finished 
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | transexitcode: 0
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | exeerrorcode: 0
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | exeerrordiag: 
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | exitcode: 0
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | exitmsg: OK
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | cpuconsumptiontime: 34946 s
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | nevents: 400
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | neventsw: 0
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | pid: 2167491
[2026-02-01 08:36:33] 2026-02-01 08:35:40,509 | INFO     | pgrp: 2167491
[2026-02-01 08:36:33] 2026-02-01 08:35:40,510 | INFO     | corecount: 12
[2026-02-01 08:36:33] 2026-02-01 08:35:40,510 | INFO     | event service: False
[2026-02-01 08:36:33] 2026-02-01 08:35:40,510 | INFO     | sizes: {0: 2277131, 1: 2278250, 12: 2278250, 3242: 2303987, 3243: 2303986, 3244: 2313042, 3246: 2313226, 3247: 2313452}
[2026-02-01 08:36:33] 2026-02-01 08:35:40,510 | INFO     | --------------------------------------------------
[2026-02-01 08:36:33] 2026-02-01 08:35:40,510 | INFO     | 
[2026-02-01 08:36:33] 2026-02-01 08:35:40,510 | INFO     | executing command: ls -lF /var/lib/boinc/slots/22
[2026-02-01 08:36:33] 2026-02-01 08:35:40,536 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 08:36:33] 2026-02-01 08:35:40,537 | INFO     | job 6995282805 has completed (purged errors)
[2026-02-01 08:36:33] 2026-02-01 08:35:40,538 | INFO     | overall cleanup function is called
[2026-02-01 08:36:33] 2026-02-01 08:35:41,547 | INFO     | --- collectZombieJob: --- 10, [2167491]
[2026-02-01 08:36:33] 2026-02-01 08:35:41,547 | INFO     | zombie collector waiting for pid 2167491
[2026-02-01 08:36:33] 2026-02-01 08:35:41,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 08:36:33] 2026-02-01 08:35:41,548 | INFO     | collected zombie processes
[2026-02-01 08:36:33] 2026-02-01 08:35:41,548 | INFO     | will attempt to kill all subprocesses of pid=2167491
[2026-02-01 08:36:33] 2026-02-01 08:35:42,310 | INFO     | process IDs to be killed: [2167491] (in reverse order)
[2026-02-01 08:36:33] 2026-02-01 08:35:42,553 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 08:36:33] 2026-02-01 08:35:42,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 08:36:33] 2026-02-01 08:35:42,580 | INFO     | did not find any defunct processes belonging to 2167491
[2026-02-01 08:36:33] 2026-02-01 08:35:42,604 | INFO     | did not find any defunct processes belonging to 2167491
[2026-02-01 08:36:33] 2026-02-01 08:35:42,604 | INFO     | ready for new job
[2026-02-01 08:36:33] 2026-02-01 08:35:42,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 08:36:33] 2026-02-01 08:35:42,607 | INFO     | **************************************
[2026-02-01 08:36:33] 2026-02-01 08:35:42,607 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 08:36:33] 2026-02-01 08:35:42,607 | INFO     | **************************************
[2026-02-01 08:36:33] 2026-02-01 08:35:42,607 | INFO     | 
[2026-02-01 08:36:33] 2026-02-01 08:35:42,645 | INFO     | architecture information:
[2026-02-01 08:36:33] 2026-02-01 08:35:42,645 | INFO     | executing command: cat /etc/os-release
[2026-02-01 08:36:33] 2026-02-01 08:35:42,670 | INFO     | cat /etc/os-release:
[2026-02-01 08:36:33] NAME="CentOS Linux"
[2026-02-01 08:36:33] VERSION="7 (Core)"
[2026-02-01 08:36:33] ID="centos"
[2026-02-01 08:36:33] ID_LIKE="rhel fedora"
[2026-02-01 08:36:33] VERSION_ID="7"
[2026-02-01 08:36:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 08:36:33] ANSI_COLOR="0;31"
[2026-02-01 08:36:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 08:36:33] HOME_URL="https://www.centos.org/"
[2026-02-01 08:36:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 08:36:33] 
[2026-02-01 08:36:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 08:36:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 08:36:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 08:36:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 08:36:33] 
[2026-02-01 08:36:33] 2026-02-01 08:35:42,670 | INFO     | **************************************
[2026-02-01 08:36:33] 2026-02-01 08:35:43,173 | INFO     | executing command: df -mP /var/lib/boinc/slots/22
[2026-02-01 08:36:33] 2026-02-01 08:35:43,199 | INFO     | sufficient remaining disk space (1698000011264 B)
[2026-02-01 08:36:33] 2026-02-01 08:35:43,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 08:36:33] 2026-02-01 08:35:43,200 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 08:36:33] 2026-02-01 08:35:43,200 | INFO     | update_server=False
[2026-02-01 08:36:33] 2026-02-01 08:35:43,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 08:36:33] 2026-02-01 08:35:43,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 08:36:33] 2026-02-01 08:35:43,544 | INFO     | all job control threads have been joined
[2026-02-01 08:36:33] 2026-02-01 08:35:43,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 08:36:33] 2026-02-01 08:35:43,704 | INFO     | aborting loop
[2026-02-01 08:36:33] 2026-02-01 08:35:43,983 | INFO     | all data control threads have been joined
[2026-02-01 08:36:33] 2026-02-01 08:35:44,206 | INFO     | [job] retrieve thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:44,255 | INFO     | [data] copytool_in thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:44,266 | INFO     | all payload control threads have been joined
[2026-02-01 08:36:33] 2026-02-01 08:35:44,348 | INFO     | [payload] failed_post thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:44,519 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:44,548 | INFO     | [job] control thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:44,710 | INFO     | [job] job monitor thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:44,953 | INFO     | [payload] validate_post thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:44,953 | INFO     | [job] validate thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:44,989 | INFO     | [data] control thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:45,207 | INFO     | [data] copytool_out thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:45,264 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:45,271 | INFO     | [payload] control thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:45,281 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:45,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 08:36:33] 2026-02-01 08:35:45,404 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:45,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 08:36:33] 2026-02-01 08:35:46,525 | INFO     | [job] queue monitor thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:35:49,409 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 08:36:33] 2026-02-01 08:36:13,714 | INFO     | PID=2161905 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 08:36:33] 2026-02-01 08:36:13,714 | INFO     | .. there are 14 such processes running
[2026-02-01 08:36:33] 2026-02-01 08:36:13,714 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 08:36:33] 2026-02-01 08:36:13,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 08:36:33] 2026-02-01 08:36:13,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 08:36:33] 2026-02-01 08:36:26,292 | INFO     | [monitor] cgroup control has ended
[2026-02-01 08:36:33] 2026-02-01 08:36:27,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525586302784)>', '<ExcThread(monitor, started 140524887471872)>']
[2026-02-01 08:36:33] 2026-02-01 08:36:27,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 08:36:33] 2026-02-01 08:36:27,785 | INFO     | [monitor] control thread has ended
[2026-02-01 08:36:33] 2026-02-01 08:36:32,612 | INFO     | all workflow threads have been joined
[2026-02-01 08:36:33] 2026-02-01 08:36:32,613 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 08:36:33] 2026-02-01 08:36:32,613 | INFO     | traces error code: 0
[2026-02-01 08:36:33] 2026-02-01 08:36:32,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 08:36:33] 2026-02-01 08:36:32,765 [wrapper] ==== pilot stdout END ====
[2026-02-01 08:36:33] 2026-02-01 08:36:32,769 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 08:36:33] 2026-02-01 08:36:32,772 [wrapper] pilotpid: 2161905
[2026-02-01 08:36:33] 2026-02-01 08:36:32,775 [wrapper] Pilot exit status: 0
[2026-02-01 08:36:33] 2026-02-01 08:36:32,784 [wrapper] pandaids: 6995282805
[2026-02-01 08:36:33] 2026-02-01 08:36:32,909 [wrapper] cleanup supervisor_pilot 2319951 2161906
[2026-02-01 08:36:33] 2026-02-01 08:36:32,913 [wrapper] Test setup, not cleaning
[2026-02-01 08:36:33] 2026-02-01 08:36:32,917 [wrapper] apfmon messages muted
[2026-02-01 08:36:33] 2026-02-01 08:36:32,921 [wrapper] ==== wrapper stdout END ====
[2026-02-01 08:36:33] 2026-02-01 08:36:32,924 [wrapper] ==== wrapper stderr END ====
[2026-02-01 08:36:33]  *** Error codes and diagnostics ***
[2026-02-01 08:36:33]     "exeErrorCode": 0,
[2026-02-01 08:36:33]     "exeErrorDiag": "",
[2026-02-01 08:36:33]     "pilotErrorCode": 0,
[2026-02-01 08:36:33]     "pilotErrorDiag": "",
[2026-02-01 08:36:33]  *** Listing of results directory ***
[2026-02-01 08:36:33] total 676452
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc    584422 Feb  1 02:40 pilot3.tar.gz
[2026-02-01 08:36:33] -rwx------ 1 boinc boinc     36322 Feb  1 02:40 runpilot2-wrapper.sh
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc      5111 Feb  1 02:41 queuedata.json
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc       100 Feb  1 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 08:36:33] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 07:41 run_atlas
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc       105 Feb  1 07:41 job.xml
[2026-02-01 08:36:33] -rw-r--r-- 2 boinc boinc 495072932 Feb  1 07:41 EVNT.48317889._000111.pool.root.1
[2026-02-01 08:36:33] -rw-r--r-- 2 boinc boinc     15845 Feb  1 07:41 start_atlas.sh
[2026-02-01 08:36:33] drwxrwx--x 2 boinc boinc      4096 Feb  1 07:41 shared
[2026-02-01 08:36:33] -rw-r--r-- 2 boinc boinc    597761 Feb  1 07:41 input.tar.gz
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc      9417 Feb  1 07:41 init_data.xml
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc         0 Feb  1 07:41 boinc_setup_complete
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc         0 Feb  1 07:41 boinc_lockfile
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc      2521 Feb  1 07:41 pandaJob.out
[2026-02-01 08:36:33] -rw------- 1 boinc boinc   1010520 Feb  1 07:41 agis_schedconf.cvmfs.json
[2026-02-01 08:36:33] -rw------- 1 boinc boinc   1511668 Feb  1 07:41 agis_ddmendpoints.agis.ALL.json
[2026-02-01 08:36:33] -rw------- 1 boinc boinc       420 Feb  1 07:41 workernode_map.json
[2026-02-01 08:36:33] drwx------ 5 boinc boinc      4096 Feb  1 07:41 pilot3
[2026-02-01 08:36:33] -rw------- 1 boinc boinc 191904926 Feb  1 08:35 HITS.48317892._005723.pool.root.1
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc       530 Feb  1 08:35 boinc_task_state.xml
[2026-02-01 08:36:33] -rw------- 1 boinc boinc        95 Feb  1 08:35 pilot_heartbeat.json
[2026-02-01 08:36:33] -rw------- 1 boinc boinc      1023 Feb  1 08:35 memory_monitor_summary.json
[2026-02-01 08:36:33] -rw------- 1 boinc boinc    400264 Feb  1 08:35 log.48317892._005723.job.log.tgz.1
[2026-02-01 08:36:33] -rw------- 1 boinc boinc      6281 Feb  1 08:35 heartbeat.json
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc      8192 Feb  1 08:36 boinc_mmap_file
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc        27 Feb  1 08:36 wrapper_checkpoint.txt
[2026-02-01 08:36:33] -rw------- 1 boinc boinc      4823 Feb  1 08:36 pilotlog.txt
[2026-02-01 08:36:33] -rw------- 1 boinc boinc    482026 Feb  1 08:36 log.48317892._005723.job.log.1
[2026-02-01 08:36:33] -rw------- 1 boinc boinc       357 Feb  1 08:36 output.list
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc       620 Feb  1 08:36 runtime_log
[2026-02-01 08:36:33] -rw------- 1 boinc boinc    901120 Feb  1 08:36 result.tar.gz
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc      8787 Feb  1 08:36 runtime_log.err
[2026-02-01 08:36:33] -rw------- 1 boinc boinc       643 Feb  1 08:36 l46NDmMZc68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqGPKDmyuXgfm.diag
[2026-02-01 08:36:33] -rw-r--r-- 1 boinc boinc     21322 Feb  1 08:36 stderr.txt
[2026-02-01 08:36:33] HITS file was successfully produced:
[2026-02-01 08:36:33] -rw------- 1 boinc boinc 191904926 Feb  1 08:35 shared/HITS.pool.root.1
[2026-02-01 08:36:33]  *** Contents of shared directory: ***
[2026-02-01 08:36:33] total 672368
[2026-02-01 08:36:33] -rw-r--r-- 2 boinc boinc 495072932 Feb  1 07:41 ATLAS.root_0
[2026-02-01 08:36:33] -rw-r--r-- 2 boinc boinc     15845 Feb  1 07:41 start_atlas.sh
[2026-02-01 08:36:33] -rw-r--r-- 2 boinc boinc    597761 Feb  1 07:41 input.tar.gz
[2026-02-01 08:36:33] -rw------- 1 boinc boinc 191904926 Feb  1 08:35 HITS.pool.root.1
[2026-02-01 08:36:33] -rw------- 1 boinc boinc    901120 Feb  1 08:36 result.tar.gz
08:36:34 (2157145): run_atlas exited; CPU time 35153.613490
08:36:34 (2157145): called boinc_finish(0)

</stderr_txt>
]]>

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