Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
02:02:19 (337579): wrapper (7.7.26015): starting
02:02:19 (337579): wrapper: running run_atlas (--nthreads 12)
[2026-02-01 02:02:19] Arguments: --nthreads 12
[2026-02-01 02:02:19] Threads: 12
[2026-02-01 02:02:19] Checking for CVMFS
[2026-02-01 02:02:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 02:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 02:02:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 02:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 02:02:20] 2.13.2.0 3873 776 53244 155743 0 188 8696062 16777216 0 130560 0 971100 99.994 25864 1206 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-02-01 02:02:20] CVMFS is ok
[2026-02-01 02:02:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 02:02:20] Checking for apptainer binary...
[2026-02-01 02:02:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 02:02:20] Running /usr/bin/apptainer --version
[2026-02-01 02:02:20] apptainer version 1.3.0-bp160.1.36
[2026-02-01 02:02:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 02:02:20] boinc-runner
[2026-02-01 02:02:20] apptainer works
[2026-02-01 02:02:20] Set ATHENA_PROC_NUMBER=12
[2026-02-01 02:02:20] Set ATHENA_CORE_NUMBER=12
[2026-02-01 02:02:20] Starting ATLAS job with PandaID=6993584930
[2026-02-01 02:02:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 02:39:37]  *** The last 200 lines of the pilot log: ***
[2026-02-01 02:39:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-01 02:39:37]  is_altstaged=None
[2026-02-01 02:39:37]  is_tar=False
[2026-02-01 02:39:37]  lfn=log.48431080._001752.job.log.tgz.1
[2026-02-01 02:39:37]  mtime=0
[2026-02-01 02:39:37]  protocol_id=None
[2026-02-01 02:39:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 02:39:37]  replicas=None
[2026-02-01 02:39:37]  scope=mc23_13p6TeV
[2026-02-01 02:39:37]  status=None
[2026-02-01 02:39:37]  status_code=0
[2026-02-01 02:39:37]  storage_token=
[2026-02-01 02:39:37]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-6993584930/log.48431080._001752.job.log.tgz.1
[2026-02-01 02:39:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/d1/log.48431080._001752.job.log.tgz.1
[2026-02-01 02:39:37]  workdir=None
[2026-02-01 02:39:37] ]
[2026-02-01 02:39:37] 2026-02-01 08:38:52,683 | INFO     | transferring file log.48431080._001752.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6993584930/log.48431080._001752.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-01 02:39:37] 2026-02-01 08:38:52,683 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6993584930/log.48431080._001752.job.log.tgz.1 /var/lib/boinc/slots/4/log.48431080._001752.job
[2026-02-01 02:39:37] 2026-02-01 08:38:52,695 | INFO     | adding to output.list: log.48431080._001752.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/d1/log.48431080._001752.job.log.tg
[2026-02-01 02:39:37] 2026-02-01 08:38:52,696 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 02:39:37] 2026-02-01 08:38:52,696 | INFO     | summary of transferred files:
[2026-02-01 02:39:37] 2026-02-01 08:38:52,696 | INFO     |  -- lfn=log.48431080._001752.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 02:39:37] 2026-02-01 08:38:52,696 | INFO     | stage-out finished correctly
[2026-02-01 02:39:37] 2026-02-01 08:38:53,591 | INFO     | time since job start (2185s) is within the limit (349056.0s)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,557 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 02:39:37] 2026-02-01 08:38:54,598 | INFO     | job 6993584930 has state=finished
[2026-02-01 02:39:37] 2026-02-01 08:38:54,598 | INFO     | preparing for final server update for job 6993584930 in state='finished'
[2026-02-01 02:39:37] 2026-02-01 08:38:54,598 | INFO     | reading metadata from: /var/lib/boinc/slots/4/PanDA_Pilot-6993584930/jobReport.json
[2026-02-01 02:39:37] 2026-02-01 08:38:54,599 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/4/workernode_map.json
[2026-02-01 02:39:37] 2026-02-01 08:38:54,600 | INFO     | this job has now completed (state=finished)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,600 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,600 | INFO     | log transfer has been attempted: DONE
[2026-02-01 02:39:37] 2026-02-01 08:38:54,600 | INFO     | job 6993584930 has finished - writing final server update
[2026-02-01 02:39:37] 2026-02-01 08:38:54,600 | INFO     | total number of processed events: 400 (read)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,603 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6993584930/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,603 | INFO     | extracted standard info from prmon json
[2026-02-01 02:39:37] 2026-02-01 08:38:54,603 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 02:39:37] 2026-02-01 08:38:54,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 02:39:37] 2026-02-01 08:38:54,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 02:39:37] 2026-02-01 08:38:54,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | fitting pss+swap vs Time
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | sum of square deviations: 7553630.0
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | sum of deviations: -2258029985.0
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | mean x: 1769934123.0
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | mean y: 2916960.275862069
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | intersect: 529094800095.75885
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | chi2: 0.06308465620102828
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | current memory leak: -298.93 B/s (using 29 data points, chi2=0.06)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | could have reported an average CPU frequency of 4424 MHz (5 samples)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | ..............................
[2026-02-01 02:39:37] 2026-02-01 08:38:54,604 | INFO     | . Timing measurements:
[2026-02-01 02:39:37] 2026-02-01 08:38:54,605 | INFO     | . get job = 0 s
[2026-02-01 02:39:37] 2026-02-01 08:38:54,605 | INFO     | . initial setup = 4 s
[2026-02-01 02:39:37] 2026-02-01 08:38:54,605 | INFO     | . payload setup = 2 s
[2026-02-01 02:39:37] 2026-02-01 08:38:54,605 | INFO     | . stage-in = 0 s
[2026-02-01 02:39:37] 2026-02-01 08:38:54,605 | INFO     | . payload execution = 2167 s
[2026-02-01 02:39:37] 2026-02-01 08:38:54,605 | INFO     | . stage-out = 0 s
[2026-02-01 02:39:37] 2026-02-01 08:38:54,605 | INFO     | . log creation = 0 s
[2026-02-01 02:39:37] 2026-02-01 08:38:54,605 | INFO     | ..............................
[2026-02-01 02:39:37] 2026-02-01 08:38:54,638 | INFO     | 
[2026-02-01 02:39:37] 2026-02-01 08:38:54,638 | INFO     | job summary report
[2026-02-01 02:39:37] 2026-02-01 08:38:54,638 | INFO     | --------------------------------------------------
[2026-02-01 02:39:37] 2026-02-01 08:38:54,638 | INFO     | PanDA job id: 6993584930
[2026-02-01 02:39:37] 2026-02-01 08:38:54,638 | INFO     | task id: 48431080
[2026-02-01 02:39:37] 2026-02-01 08:38:54,638 | INFO     | errors: (none)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,638 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | pilot state: finished 
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | transexitcode: 0
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | exeerrorcode: 0
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | exeerrordiag: 
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | exitcode: 0
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | exitmsg: OK
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | cpuconsumptiontime: 23885 s
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | nevents: 400
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | neventsw: 0
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | pid: 346026
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | pgrp: 346026
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | corecount: 12
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | event service: False
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | sizes: {0: 2278312, 11: 2278312, 2172: 2303457, 2173: 2312455, 2174: 2312737}
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | --------------------------------------------------
[2026-02-01 02:39:37] 2026-02-01 08:38:54,639 | INFO     | 
[2026-02-01 02:39:37] 2026-02-01 08:38:54,640 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | job 6993584930 has completed (purged errors)
[2026-02-01 02:39:37] 2026-02-01 08:38:54,652 | INFO     | overall cleanup function is called
[2026-02-01 02:39:37] 2026-02-01 08:38:55,661 | INFO     | --- collectZombieJob: --- 10, [346026]
[2026-02-01 02:39:37] 2026-02-01 08:38:55,661 | INFO     | zombie collector waiting for pid 346026
[2026-02-01 02:39:37] 2026-02-01 08:38:55,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 02:39:37] 2026-02-01 08:38:55,661 | INFO     | collected zombie processes
[2026-02-01 02:39:37] 2026-02-01 08:38:55,662 | INFO     | will attempt to kill all subprocesses of pid=346026
[2026-02-01 02:39:37] 2026-02-01 08:38:55,743 | INFO     | process IDs to be killed: [346026] (in reverse order)
[2026-02-01 02:39:37] 2026-02-01 08:38:55,780 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 02:39:37] 2026-02-01 08:38:55,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 02:39:37] 2026-02-01 08:38:55,787 | INFO     | did not find any defunct processes belonging to 346026
[2026-02-01 02:39:37] 2026-02-01 08:38:55,793 | INFO     | did not find any defunct processes belonging to 346026
[2026-02-01 02:39:37] 2026-02-01 08:38:55,793 | INFO     | ready for new job
[2026-02-01 02:39:37] 2026-02-01 08:38:55,793 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 02:39:37] 2026-02-01 08:38:55,795 | INFO     | **************************************
[2026-02-01 02:39:37] 2026-02-01 08:38:55,795 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 02:39:37] 2026-02-01 08:38:55,795 | INFO     | **************************************
[2026-02-01 02:39:37] 2026-02-01 08:38:55,795 | INFO     | 
[2026-02-01 02:39:37] 2026-02-01 08:38:55,796 | INFO     | architecture information:
[2026-02-01 02:39:37] 2026-02-01 08:38:55,796 | INFO     | executing command: cat /etc/os-release
[2026-02-01 02:39:37] 2026-02-01 08:38:55,804 | INFO     | cat /etc/os-release:
[2026-02-01 02:39:37] NAME="CentOS Linux"
[2026-02-01 02:39:37] VERSION="7 (Core)"
[2026-02-01 02:39:37] ID="centos"
[2026-02-01 02:39:37] ID_LIKE="rhel fedora"
[2026-02-01 02:39:37] VERSION_ID="7"
[2026-02-01 02:39:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 02:39:37] ANSI_COLOR="0;31"
[2026-02-01 02:39:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 02:39:37] HOME_URL="https://www.centos.org/"
[2026-02-01 02:39:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 02:39:37] 
[2026-02-01 02:39:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 02:39:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 02:39:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 02:39:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 02:39:37] 
[2026-02-01 02:39:37] 2026-02-01 08:38:55,804 | INFO     | **************************************
[2026-02-01 02:39:37] 2026-02-01 08:38:55,812 | WARNING  | process 346026 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 02:39:37] 2026-02-01 08:38:55,852 | INFO     | using path: /var/lib/boinc/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 02:39:37] 2026-02-01 08:38:55,905 | INFO     | number of running child processes to parent process 346026: 1
[2026-02-01 02:39:37] 2026-02-01 08:38:55,905 | INFO     | maximum number of monitored processes: 6
[2026-02-01 02:39:37] 2026-02-01 08:38:55,906 | INFO     | aborting job monitoring since job object (job id=6993584930) has expired
[2026-02-01 02:39:37] 2026-02-01 08:38:56,306 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-02-01 02:39:37] 2026-02-01 08:38:56,313 | INFO     | sufficient remaining disk space (3863267508224 B)
[2026-02-01 02:39:37] 2026-02-01 08:38:56,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 02:39:37] 2026-02-01 08:38:56,314 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 02:39:37] 2026-02-01 08:38:56,314 | INFO     | update_server=False
[2026-02-01 02:39:37] 2026-02-01 08:38:56,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 02:39:37] 2026-02-01 08:38:56,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 02:39:37] 2026-02-01 08:38:56,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 02:39:37] 2026-02-01 08:38:56,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 02:39:37] 2026-02-01 08:38:56,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 02:39:37] 2026-02-01 08:38:56,314 | INFO     | will abort loop
[2026-02-01 02:39:37] 2026-02-01 08:38:56,835 | INFO     | all data control threads have been joined
[2026-02-01 02:39:37] 2026-02-01 08:38:57,073 | INFO     | all payload control threads have been joined
[2026-02-01 02:39:37] 2026-02-01 08:38:57,318 | INFO     | [job] retrieve thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:57,319 | INFO     | [job] job monitor thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:57,319 | INFO     | [job] queue monitor thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:57,337 | INFO     | [data] copytool_in thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:57,558 | INFO     | [payload] failed_post thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:57,661 | INFO     | all job control threads have been joined
[2026-02-01 02:39:37] 2026-02-01 08:38:57,806 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:57,840 | INFO     | [data] control thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:58,078 | INFO     | [payload] control thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:58,141 | INFO     | [payload] validate_post thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:58,319 | INFO     | [data] copytool_out thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:58,612 | INFO     | [job] validate thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:58,666 | INFO     | [job] control thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:58,685 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:38:58,727 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:39:00,319 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:39:06,858 | INFO     | job.realtimelogging is not enabled
[2026-02-01 02:39:37] 2026-02-01 08:39:07,863 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 02:39:37] 2026-02-01 08:39:26,728 | INFO     | PID=341443 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 02:39:37] 2026-02-01 08:39:26,729 | INFO     | .. there are 2 such processes running
[2026-02-01 02:39:37] 2026-02-01 08:39:26,729 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 02:39:37] 2026-02-01 08:39:26,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 02:39:37] 2026-02-01 08:39:26,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 02:39:37] 2026-02-01 08:39:32,053 | INFO     | [monitor] cgroup control has ended
[2026-02-01 02:39:37] 2026-02-01 08:39:32,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140586931005248)>', '<ExcThread(monitor, started 140586224973568)>']
[2026-02-01 02:39:37] 2026-02-01 08:39:32,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 02:39:37] 2026-02-01 08:39:32,758 | INFO     | [monitor] control thread has ended
[2026-02-01 02:39:37] 2026-02-01 08:39:37,087 | INFO     | all workflow threads have been joined
[2026-02-01 02:39:37] 2026-02-01 08:39:37,088 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 02:39:37] 2026-02-01 08:39:37,088 | INFO     | traces error code: 0
[2026-02-01 02:39:37] 2026-02-01 08:39:37,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 02:39:37] 2026-02-01 08:39:37,145 [wrapper] ==== pilot stdout END ====
[2026-02-01 02:39:37] 2026-02-01 08:39:37,146 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 02:39:37] 2026-02-01 08:39:37,147 [wrapper] pilotpid: 341443
[2026-02-01 02:39:37] 2026-02-01 08:39:37,149 [wrapper] Pilot exit status: 0
[2026-02-01 02:39:37] 2026-02-01 08:39:37,157 [wrapper] pandaids: 6993584930
[2026-02-01 02:39:37] 2026-02-01 08:39:37,176 [wrapper] cleanup supervisor_pilot  364159 341444
[2026-02-01 02:39:37] 2026-02-01 08:39:37,177 [wrapper] Test setup, not cleaning
[2026-02-01 02:39:37] 2026-02-01 08:39:37,179 [wrapper] apfmon messages muted
[2026-02-01 02:39:37] 2026-02-01 08:39:37,181 [wrapper] ==== wrapper stdout END ====
[2026-02-01 02:39:37] 2026-02-01 08:39:37,183 [wrapper] ==== wrapper stderr END ====
[2026-02-01 02:39:37]  *** Error codes and diagnostics ***
[2026-02-01 02:39:37]     "exeErrorCode": 0,
[2026-02-01 02:39:37]     "exeErrorDiag": "",
[2026-02-01 02:39:37]     "pilotErrorCode": 0,
[2026-02-01 02:39:37]     "pilotErrorDiag": "",
[2026-02-01 02:39:37]  *** Listing of results directory ***
[2026-02-01 02:39:37] total 885512
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc    584422 Jan 30 08:56 pilot3.tar.gz
[2026-02-01 02:39:37] -rwx------. 1 boinc boinc     36322 Jan 30 08:59 runpilot2-wrapper.sh
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc      5111 Jan 30 09:02 queuedata.json
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc       100 Feb  1 02:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 02:39:37] -rwxr-xr-x. 1 boinc boinc      7986 Feb  1 02:02 run_atlas
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc       105 Feb  1 02:02 job.xml
[2026-02-01 02:39:37] -rw-r--r--. 2 boinc boinc     15845 Feb  1 02:02 start_atlas.sh
[2026-02-01 02:39:37] drwxrwx--x. 1 boinc boinc        76 Feb  1 02:02 shared
[2026-02-01 02:39:37] -rw-r--r--. 2 boinc boinc    597778 Feb  1 02:02 input.tar.gz
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc     10049 Feb  1 02:02 init_data.xml
[2026-02-01 02:39:37] -rw-r--r--. 2 boinc boinc 648760553 Feb  1 02:02 EVNT.48431078._000035.pool.root.1
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc         0 Feb  1 02:02 boinc_setup_complete
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc         0 Feb  1 02:02 boinc_lockfile
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc      2556 Feb  1 02:02 pandaJob.out
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc        63 Feb  1 02:02 setup.sh.local
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc   1010520 Feb  1 02:02 agis_schedconf.cvmfs.json
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc   1511668 Feb  1 02:02 agis_ddmendpoints.agis.ALL.json
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc       431 Feb  1 02:02 workernode_map.json
[2026-02-01 02:39:37] drwx------. 1 boinc boinc       414 Feb  1 02:02 pilot3
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc       530 Feb  1 02:38 boinc_task_state.xml
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc 252681765 Feb  1 02:38 HITS.48431080._001752.pool.root.1
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc        95 Feb  1 02:38 pilot_heartbeat.json
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc      1026 Feb  1 02:38 memory_monitor_summary.json
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc    341909 Feb  1 02:38 log.48431080._001752.job.log.tgz.1
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc      6345 Feb  1 02:38 heartbeat.json
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc      8192 Feb  1 02:39 boinc_mmap_file
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc        27 Feb  1 02:39 wrapper_checkpoint.txt
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc      5411 Feb  1 02:39 pilotlog.txt
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc    353597 Feb  1 02:39 log.48431080._001752.job.log.1
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc       357 Feb  1 02:39 output.list
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc       620 Feb  1 02:39 runtime_log
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc    716800 Feb  1 02:39 result.tar.gz
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc      9395 Feb  1 02:39 runtime_log.err
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc       651 Feb  1 02:39 PmEODmJ9458nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmHaLKDmiJpjxm.diag
[2026-02-01 02:39:37] -rw-r--r--. 1 boinc boinc     21078 Feb  1 02:39 stderr.txt
[2026-02-01 02:39:37] HITS file was successfully produced:
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc 252681765 Feb  1 02:38 shared/HITS.pool.root.1
[2026-02-01 02:39:37]  *** Contents of shared directory: ***
[2026-02-01 02:39:37] total 881616
[2026-02-01 02:39:37] -rw-r--r--. 2 boinc boinc     15845 Feb  1 02:02 start_atlas.sh
[2026-02-01 02:39:37] -rw-r--r--. 2 boinc boinc    597778 Feb  1 02:02 input.tar.gz
[2026-02-01 02:39:37] -rw-r--r--. 2 boinc boinc 648760553 Feb  1 02:02 ATLAS.root_0
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc 252681765 Feb  1 02:38 HITS.pool.root.1
[2026-02-01 02:39:37] -rw-------. 1 boinc boinc    716800 Feb  1 02:39 result.tar.gz
02:39:39 (337579): run_atlas exited; CPU time 23890.683465
02:39:39 (337579): called boinc_finish(0)

</stderr_txt>
]]>

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